RNA–Protein interactions for RNA: ENST00000547068.5

NPAS3-205, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 2,531 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-205ENST00000547068 PIK3R4Q99570 1358 aa13.13□□□□□ -0.31
NPAS3-205ENST00000547068 ABCC11Q96J66 1382 aa13.12□□□□□ -0.31
NPAS3-205ENST00000547068 GCC1Q96CN9 775 aa13.12□□□□□ -0.31
NPAS3-205ENST00000547068 TMEM63CQ9P1W3 806 aa13.12□□□□□ -0.31
NPAS3-205ENST00000547068 AMOTL2Q9Y2J4 779 aa13.12□□□□□ -0.31
NPAS3-205ENST00000547068 CDC45O75419 566 aa13.12□□□□□ -0.31
NPAS3-205ENST00000547068 CWC22Q9HCG8 908 aaKnown RBP13.12□□□□□ -0.31
NPAS3-205ENST00000547068 ZBTB7CA1YPR0 619 aa13.11□□□□□ -0.31
NPAS3-205ENST00000547068 RNF214Q8ND24 703 aa13.11□□□□□ -0.31
NPAS3-205ENST00000547068 GTPBP4Q9BZE4 634 aaKnown RBP13.11□□□□□ -0.31
NPAS3-205ENST00000547068 CBX1P83916 185 aa13.1□□□□□ -0.31
NPAS3-205ENST00000547068 SIRT1Q96EB6 747 aa13.1□□□□□ -0.31
NPAS3-205ENST00000547068 JARID2Q92833 1246 aaPredicted RBP13.1□□□□□ -0.31
NPAS3-205ENST00000547068 PRIMPOLQ96LW4 560 aa13.1□□□□□ -0.31
NPAS3-205ENST00000547068 PRAM1Q96QH2 718 aa13.1□□□□□ -0.31
NPAS3-205ENST00000547068 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.1□□□□□ -0.31
NPAS3-205ENST00000547068 STRCQ7RTU9 1775 aa13.09□□□□□ -0.31
NPAS3-205ENST00000547068 ADGRB2O60241 1585 aa13.09□□□□□ -0.31
NPAS3-205ENST00000547068 HMGN5P82970 282 aaKnown RBP13.09□□□□□ -0.31
NPAS3-205ENST00000547068 SAFB2Q14151 953 aaKnown RBP eCLIP13.09□□□□□ -0.31
NPAS3-205ENST00000547068 ZNF710Q8N1W2 664 aa13.09□□□□□ -0.31
NPAS3-205ENST00000547068 SLC12A5Q9H2X9 1139 aa13.09□□□□□ -0.31
NPAS3-205ENST00000547068 PPIP5K1Q6PFW1 1433 aa13.08□□□□□ -0.31
NPAS3-205ENST00000547068 KIF20AO95235 890 aa13.08□□□□□ -0.32
NPAS3-205ENST00000547068 KCNA6P17658 529 aa13.08□□□□□ -0.32
NPAS3-205ENST00000547068 TSC1Q92574 1164 aa13.08□□□□□ -0.32
NPAS3-205ENST00000547068 ZGPATQ8N5A5 531 aaKnown RBP13.08□□□□□ -0.32
NPAS3-205ENST00000547068 NSFL1CQ9UNZ2 370 aaKnown RBP13.08□□□□□ -0.32
NPAS3-205ENST00000547068 PTPRUQ92729 1446 aa13.08□□□□□ -0.32
NPAS3-205ENST00000547068 DLC1Q96QB1 1528 aa13.07□□□□□ -0.32
NPAS3-205ENST00000547068 TMPOP42166 694 aaKnown RBP13.07□□□□□ -0.32
NPAS3-205ENST00000547068 WAPLQ7Z5K2 1190 aa13.07□□□□□ -0.32
NPAS3-205ENST00000547068 TRIM35Q9UPQ4 493 aa13.07□□□□□ -0.32
NPAS3-205ENST00000547068 ZDHHC9Q9Y397 364 aa13.07□□□□□ -0.32
NPAS3-205ENST00000547068 ARHGEF28Q8N1W1 1705 aaKnown RBP13.07□□□□□ -0.32
NPAS3-205ENST00000547068 MBD3O95983 291 aa13.07□□□□□ -0.32
NPAS3-205ENST00000547068 GTF2F1P35269 517 aaKnown RBP eCLIP13.07□□□□□ -0.32
NPAS3-205ENST00000547068 PPP4R3BQ5MIZ7 849 aa13.07□□□□□ -0.32
NPAS3-205ENST00000547068 C1orf115Q9H7X2 142 aa13.07□□□□□ -0.32
NPAS3-205ENST00000547068 CHD2O14647 1828 aaKnown RBP13.07□□□□□ -0.32
NPAS3-205ENST00000547068 TECPR2O15040 1411 aa13.07□□□□□ -0.32
NPAS3-205ENST00000547068 ST18O60284 1047 aa13.06□□□□□ -0.32
NPAS3-205ENST00000547068 LETM1O95202 739 aaPredicted RBP13.06□□□□□ -0.32
NPAS3-205ENST00000547068 CHAMP1Q96JM3 812 aa13.06□□□□□ -0.32
NPAS3-205ENST00000547068 CFAP44Q96MT7 982 aa13.06□□□□□ -0.32
NPAS3-205ENST00000547068 FAM135BQ49AJ0 1406 aa13.06□□□□□ -0.32
NPAS3-205ENST00000547068 KNDC1Q76NI1 1749 aa13.06□□□□□ -0.32
NPAS3-205ENST00000547068 ZBTB7BO15156 539 aaPredicted RBP13.06□□□□□ -0.32
NPAS3-205ENST00000547068 CHMP4BQ9H444 224 aaKnown RBP13.06□□□□□ -0.32
NPAS3-205ENST00000547068 TSPY26PQ9H489 355 aa13.06□□□□□ -0.32
NPAS3-205ENST00000547068 SBNO2Q9Y2G9 1366 aa13.05□□□□□ -0.32
NPAS3-205ENST00000547068 NOLC1Q14978 699 aaKnown RBP eCLIP13.05□□□□□ -0.32
NPAS3-205ENST00000547068 ALDH1L2Q3SY69 923 aa13.05□□□□□ -0.32
NPAS3-205ENST00000547068 PIBF1Q8WXW3 757 aa13.05□□□□□ -0.32
NPAS3-205ENST00000547068 USP26Q9BXU7 913 aa13.05□□□□□ -0.32
NPAS3-205ENST00000547068 KIF3AQ9Y496 699 aa13.05□□□□□ -0.32
NPAS3-205ENST00000547068 IL16Q14005 1332 aa13.05□□□□□ -0.32
NPAS3-205ENST00000547068 U2SURPO15042 1029 aaKnown RBP13.05□□□□□ -0.32
NPAS3-205ENST00000547068 GSPT1P15170 499 aaKnown RBP13.05□□□□□ -0.32
NPAS3-205ENST00000547068 ATP2B3Q16720 1220 aa13.05□□□□□ -0.32
NPAS3-205ENST00000547068 ROBO2Q9HCK4 1378 aa13.04□□□□□ -0.32
NPAS3-205ENST00000547068 MINK1Q8N4C8 1332 aaPredicted RBP13.04□□□□□ -0.32
NPAS3-205ENST00000547068 CPS1P31327 1500 aa13.04□□□□□ -0.32
NPAS3-205ENST00000547068 FOXD4L5Q5VV16 416 aaPredicted RBP13.04□□□□□ -0.32
NPAS3-205ENST00000547068 FOXD4L4Q8WXT5 416 aaPredicted RBP13.04□□□□□ -0.32
NPAS3-205ENST00000547068 PLEKHF1Q96S99 279 aa13.04□□□□□ -0.32
NPAS3-205ENST00000547068 QRICH2Q9H0J4 1663 aa13.04□□□□□ -0.32
NPAS3-205ENST00000547068 EVC2Q86UK5 1308 aa13.04□□□□□ -0.32
NPAS3-205ENST00000547068 PTCH1Q13635 1447 aa13.03□□□□□ -0.32
NPAS3-205ENST00000547068 MPNDQ8N594 471 aa13.03□□□□□ -0.32
NPAS3-205ENST00000547068 PROSER2Q86WR7 435 aaPredicted RBP13.03□□□□□ -0.32
NPAS3-205ENST00000547068 BBXQ8WY36 941 aaPredicted RBP13.03□□□□□ -0.32
NPAS3-205ENST00000547068 ZNF830Q96NB3 372 aaPredicted RBP13.03□□□□□ -0.32
NPAS3-205ENST00000547068 XRN1Q8IZH2 1706 aaKnown RBP13.03□□□□□ -0.32
NPAS3-205ENST00000547068 FAM177BA6PVY3 158 aa13.02□□□□□ -0.32
NPAS3-205ENST00000547068 SIRT2Q8IXJ6 389 aa13.02□□□□□ -0.32
NPAS3-205ENST00000547068 SYAP1Q96A49 352 aaPredicted RBP13.02□□□□□ -0.32
NPAS3-205ENST00000547068 INTS3Q68E01 1043 aaKnown RBP13.02□□□□□ -0.33
NPAS3-205ENST00000547068 PLEKHM2Q8IWE5 1019 aa13.02□□□□□ -0.33
NPAS3-205ENST00000547068 BCL2L12Q9HB09 334 aa13.01□□□□□ -0.33
NPAS3-205ENST00000547068 USP32Q8NFA0 1604 aa13.01□□□□□ -0.33
NPAS3-205ENST00000547068 C14orf37Q86TY3 774 aa13.01□□□□□ -0.33
NPAS3-205ENST00000547068 PDCL2Q8N4E4 241 aa13.01□□□□□ -0.33
NPAS3-205ENST00000547068 SPDYE4A6NLX3 237 aa13□□□□□ -0.33
NPAS3-205ENST00000547068 SRPK2P78362 688 aaKnown RBP13□□□□□ -0.33
NPAS3-205ENST00000547068 TTC22Q5TAA0 569 aa13□□□□□ -0.33
NPAS3-205ENST00000547068 FKBP5Q13451 457 aaPredicted RBP13□□□□□ -0.33
NPAS3-205ENST00000547068 C17orf53Q8N3J3 647 aaPredicted RBP13□□□□□ -0.33
NPAS3-205ENST00000547068 TTC12Q9H892 705 aaPredicted RBP13□□□□□ -0.33
NPAS3-205ENST00000547068 NWD1Q149M9 1564 aa12.99□□□□□ -0.33
NPAS3-205ENST00000547068 PHF14O94880 888 aa12.99□□□□□ -0.33
NPAS3-205ENST00000547068 BRPF1P55201 1214 aaPredicted RBP12.99□□□□□ -0.33
NPAS3-205ENST00000547068 CASC1Q6TDU7 716 aa12.99□□□□□ -0.33
NPAS3-205ENST00000547068 CDK19Q9BWU1 502 aa12.99□□□□□ -0.33
NPAS3-205ENST00000547068 WASLO00401 505 aaPredicted RBP12.99□□□□□ -0.33
NPAS3-205ENST00000547068 UVSSAQ2YD98 709 aa12.99□□□□□ -0.33
NPAS3-205ENST00000547068 FAM184AQ8NB25 1140 aa12.99□□□□□ -0.33
NPAS3-205ENST00000547068 PUS7Q96PZ0 661 aaKnown RBP12.99□□□□□ -0.33
NPAS3-205ENST00000547068 USP25Q9UHP3 1055 aa12.99□□□□□ -0.33
NPAS3-205ENST00000547068 ZNF335Q9H4Z2 1342 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms