RNA–Protein interactions for RNA: ENST00000547065.1

VDR-204, Transcript of vitamin D receptor, humanhuman

TSL 2

Gene VDR, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-204ENST00000547065 NWD1Q149M9 1564 aa23.64■■□□□ 1.38
VDR-204ENST00000547065 IP6K1Q92551 441 aa23.64■■□□□ 1.37
VDR-204ENST00000547065 FOXO3O43524 673 aa23.63■■□□□ 1.37
VDR-204ENST00000547065 ABCC4O15439 1325 aa23.63■■□□□ 1.37
VDR-204ENST00000547065 ZBTB7BO15156 539 aaPredicted RBP23.63■■□□□ 1.37
VDR-204ENST00000547065 DDRGK1Q96HY6 314 aa23.62■■□□□ 1.37
VDR-204ENST00000547065 SMC5Q8IY18 1101 aa23.6■■□□□ 1.37
VDR-204ENST00000547065 ORAI2Q96SN7 254 aa23.6■■□□□ 1.37
VDR-204ENST00000547065 LTV1Q96GA3 475 aaPredicted RBP23.6■■□□□ 1.37
VDR-204ENST00000547065 C19orf44Q9H6X5 657 aa23.59■■□□□ 1.37
VDR-204ENST00000547065 GNAT3A8MTJ3 354 aa23.58■■□□□ 1.37
VDR-204ENST00000547065 NFAT5O94916 1531 aa23.58■■□□□ 1.36
VDR-204ENST00000547065 TSPYL4Q9UJ04 414 aa23.57■■□□□ 1.36
VDR-204ENST00000547065 KRT24Q2M2I5 525 aa23.56■■□□□ 1.36
VDR-204ENST00000547065 BABAM1Q9NWV8 329 aa23.55■■□□□ 1.36
VDR-204ENST00000547065 MIS18AQ9NYP9 233 aa23.55■■□□□ 1.36
VDR-204ENST00000547065 PTPRCP08575 1304 aa23.54■■□□□ 1.36
VDR-204ENST00000547065 INTS3Q68E01 1043 aaKnown RBP23.53■■□□□ 1.36
VDR-204ENST00000547065 KRT28Q7Z3Y7 464 aa23.53■■□□□ 1.36
VDR-204ENST00000547065 MAP3K5Q99683 1374 aa23.53■■□□□ 1.36
VDR-204ENST00000547065 GCP02774 474 aa23.52■■□□□ 1.36
VDR-204ENST00000547065 C1orf167Q5SNV9 1468 aa23.52■■□□□ 1.36
VDR-204ENST00000547065 NUCB1Q02818 461 aa23.51■■□□□ 1.35
VDR-204ENST00000547065 ARHGEF25Q86VW2 580 aa23.5■■□□□ 1.35
VDR-204ENST00000547065 GCC1Q96CN9 775 aa23.5■■□□□ 1.35
VDR-204ENST00000547065 LTN1O94822 1766 aa23.5■■□□□ 1.35
VDR-204ENST00000547065 NBPF6Q5VWK0 638 aa23.5■■□□□ 1.35
VDR-204ENST00000547065 IL17REQ8NFR9 667 aa23.5■■□□□ 1.35
VDR-204ENST00000547065 NBPF4Q96M43 638 aa23.5■■□□□ 1.35
VDR-204ENST00000547065 SOS1Q07889 1333 aaPredicted RBP23.49■■□□□ 1.35
VDR-204ENST00000547065 NCOA3Q9Y6Q9 1424 aa23.49■■□□□ 1.35
VDR-204ENST00000547065 SLC4A2P04920 1241 aa23.49■■□□□ 1.35
VDR-204ENST00000547065 XPCQ01831 940 aaPredicted RBP23.49■■□□□ 1.35
VDR-204ENST00000547065 TAF7Q15545 349 aaPredicted RBP23.49■■□□□ 1.35
VDR-204ENST00000547065 USHBP1Q8N6Y0 703 aa23.49■■□□□ 1.35
VDR-204ENST00000547065 MSH6P52701 1360 aa23.49■■□□□ 1.35
VDR-204ENST00000547065 SLIT3O75094 1523 aa23.48■■□□□ 1.35
VDR-204ENST00000547065 ATF3P18847 181 aa23.48■■□□□ 1.35
VDR-204ENST00000547065 USP19O94966 1318 aa23.48■■□□□ 1.35
VDR-204ENST00000547065 PHRF1Q9P1Y6 1649 aaKnown RBP23.48■■□□□ 1.35
VDR-204ENST00000547065 ZBTB7CA1YPR0 619 aa23.47■■□□□ 1.35
VDR-204ENST00000547065 KIF1AQ12756 1690 aa23.46■■□□□ 1.35
VDR-204ENST00000547065 LMOD2Q6P5Q4 547 aa23.46■■□□□ 1.35
VDR-204ENST00000547065 MST1RQ04912 1400 aa23.46■■□□□ 1.35
VDR-204ENST00000547065 LRRC37A3O60309 1634 aa23.46■■□□□ 1.35
VDR-204ENST00000547065 CHD1LQ86WJ1 897 aa23.45■■□□□ 1.34
VDR-204ENST00000547065 C1orf115Q9H7X2 142 aa23.45■■□□□ 1.34
VDR-204ENST00000547065 RGS12O14924 1447 aa23.45■■□□□ 1.34
VDR-204ENST00000547065 TMEM94Q12767 1356 aa23.44■■□□□ 1.34
VDR-204ENST00000547065 SIRT2Q8IXJ6 389 aa23.44■■□□□ 1.34
VDR-204ENST00000547065 VIRMAQ69YN4 1812 aaKnown RBP23.44■■□□□ 1.34
VDR-204ENST00000547065 DCCP43146 1447 aa23.43■■□□□ 1.34
VDR-204ENST00000547065 SEC24BO95487 1268 aa23.43■■□□□ 1.34
VDR-204ENST00000547065 STK31Q9BXU1 1019 aa23.43■■□□□ 1.34
VDR-204ENST00000547065 PLEKHO1Q53GL0 409 aaPredicted RBP23.42■■□□□ 1.34
VDR-204ENST00000547065 CCDC30Q5VVM6 783 aa23.42■■□□□ 1.34
VDR-204ENST00000547065 TRPM3Q9HCF6 1732 aaPredicted RBP23.42■■□□□ 1.34
VDR-204ENST00000547065 AMOTQ4VCS5 1084 aa23.42■■□□□ 1.34
VDR-204ENST00000547065 UPF2Q9HAU5 1272 aaKnown RBP23.42■■□□□ 1.34
VDR-204ENST00000547065 ANKRD24Q8TF21 1146 aa23.41■■□□□ 1.34
VDR-204ENST00000547065 DAXXQ9UER7 740 aaPredicted RBP23.41■■□□□ 1.34
VDR-204ENST00000547065 CEMIPQ8WUJ3 1361 aa23.41■■□□□ 1.34
VDR-204ENST00000547065 ANKRD45Q5TZF3 282 aa23.4■■□□□ 1.34
VDR-204ENST00000547065 LRRC59Q96AG4 307 aaKnown RBP23.4■■□□□ 1.34
VDR-204ENST00000547065 RPAP2Q8IXW5 612 aaPredicted RBP23.4■■□□□ 1.34
VDR-204ENST00000547065 LNPKQ9C0E8 428 aa23.4■■□□□ 1.34
VDR-204ENST00000547065 CCT4P50991 539 aaKnown RBP23.39■■□□□ 1.33
VDR-204ENST00000547065 AKAP4Q5JQC9 854 aa23.39■■□□□ 1.33
VDR-204ENST00000547065 CADPS2Q86UW7 1296 aa23.39■■□□□ 1.33
VDR-204ENST00000547065 NCAPD2Q15021 1401 aa23.39■■□□□ 1.33
VDR-204ENST00000547065 G2E3Q7L622 706 aa23.38■■□□□ 1.33
VDR-204ENST00000547065 ANKRD44Q8N8A2 993 aa23.37■■□□□ 1.33
VDR-204ENST00000547065 ZNF530Q6P9A1 599 aaPredicted RBP23.37■■□□□ 1.33
VDR-204ENST00000547065 PLEKHG5O94827 1062 aa23.36■■□□□ 1.33
VDR-204ENST00000547065 CHMP4AQ9BY43 222 aa23.36■■□□□ 1.33
VDR-204ENST00000547065 DCTPP1Q9H773 170 aa23.36■■□□□ 1.33
VDR-204ENST00000547065 LGR6Q9HBX8 967 aa23.35■■□□□ 1.33
VDR-204ENST00000547065 AXIN2Q9Y2T1 843 aa23.35■■□□□ 1.33
VDR-204ENST00000547065 FLIIQ13045 1269 aa23.33■■□□□ 1.33
VDR-204ENST00000547065 TBC1D32Q96NH3 1257 aa23.33■■□□□ 1.33
VDR-204ENST00000547065 NPHP3Q7Z494 1330 aa23.33■■□□□ 1.32
VDR-204ENST00000547065 HSPA2P54652 639 aa23.32■■□□□ 1.32
VDR-204ENST00000547065 C1orf141Q5JVX7 400 aa23.32■■□□□ 1.32
VDR-204ENST00000547065 CEP85Q6P2H3 762 aa23.32■■□□□ 1.32
VDR-204ENST00000547065 STRCP1A6NGW2 1772 aa23.32■■□□□ 1.32
VDR-204ENST00000547065 HOXB7P09629 217 aa23.32■■□□□ 1.32
VDR-204ENST00000547065 TEFQ10587 303 aa23.32■■□□□ 1.32
VDR-204ENST00000547065 SLC4A10Q6U841 1118 aa23.32■■□□□ 1.32
VDR-204ENST00000547065 MEIS3Q99687 375 aa23.32■■□□□ 1.32
VDR-204ENST00000547065 ALS2Q96Q42 1657 aa23.31■■□□□ 1.32
VDR-204ENST00000547065 F6X3S4 739 aa23.31■■□□□ 1.32
VDR-204ENST00000547065 EIF4A1P60842 406 aaKnown RBP23.31■■□□□ 1.32
VDR-204ENST00000547065 BMP2KLQ5H9B9 411 aa23.31■■□□□ 1.32
VDR-204ENST00000547065 MED1Q15648 1581 aaPredicted RBP23.31■■□□□ 1.32
VDR-204ENST00000547065 ATP10DQ9P241 1426 aa23.3■■□□□ 1.32
VDR-204ENST00000547065 ZC3H6P61129 1189 aaKnown RBP23.3■■□□□ 1.32
VDR-204ENST00000547065 RNMTO43148 476 aaKnown RBP23.29■■□□□ 1.32
VDR-204ENST00000547065 FKBP5Q13451 457 aaPredicted RBP23.29■■□□□ 1.32
VDR-204ENST00000547065 HDGFL1Q5TGJ6 251 aa23.29■■□□□ 1.32
VDR-204ENST00000547065 SLC4A3P48751 1232 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms