RNA–Protein interactions for RNA: ENST00000546974.1

COL2A1-209, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL2A1, Length 703 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-209ENST00000546974 EIF4G2P78344 907 aaKnown RBP eCLIP19.92■□□□□ 0.78
COL2A1-209ENST00000546974 PPP1R1BQ9UD71 204 aaPredicted RBP19.92■□□□□ 0.78
COL2A1-209ENST00000546974 PDGFDQ9GZP0 370 aaPredicted RBP19.91■□□□□ 0.78
COL2A1-209ENST00000546974 MAP2P11137 1827 aaKnown RBP19.9■□□□□ 0.78
COL2A1-209ENST00000546974 USHBP1Q8N6Y0 703 aa19.9■□□□□ 0.78
COL2A1-209ENST00000546974 RAPGEF4Q8WZA2 1011 aa19.9■□□□□ 0.78
COL2A1-209ENST00000546974 PAPPAQ13219 1627 aa19.9■□□□□ 0.78
COL2A1-209ENST00000546974 HSPA5P11021 654 aaKnown RBP19.89■□□□□ 0.77
COL2A1-209ENST00000546974 TATP17735 454 aaPredicted RBP19.89■□□□□ 0.77
COL2A1-209ENST00000546974 PRIM1P49642 420 aaKnown RBP19.89■□□□□ 0.77
COL2A1-209ENST00000546974 DOT1LQ8TEK3 1739 aa19.89■□□□□ 0.77
COL2A1-209ENST00000546974 POLR3GLQ9BT43 218 aa19.89■□□□□ 0.77
COL2A1-209ENST00000546974 EMILIN1Q9Y6C2 1016 aa19.89■□□□□ 0.77
COL2A1-209ENST00000546974 ZBTB7AO95365 584 aa19.88■□□□□ 0.77
COL2A1-209ENST00000546974 SLC27A3Q5K4L6 730 aa19.88■□□□□ 0.77
COL2A1-209ENST00000546974 LRRC4BQ9NT99 713 aa19.88■□□□□ 0.77
COL2A1-209ENST00000546974 ANKRD26Q9UPS8 1709 aa19.88■□□□□ 0.77
COL2A1-209ENST00000546974 SYTL4Q96C24 671 aaPredicted RBP19.87■□□□□ 0.77
COL2A1-209ENST00000546974 NSD2O96028 1365 aa19.85■□□□□ 0.77
COL2A1-209ENST00000546974 WASHC2AQ641Q2 1341 aa19.85■□□□□ 0.77
COL2A1-209ENST00000546974 PTGER2P43116 358 aa19.85■□□□□ 0.77
COL2A1-209ENST00000546974 MTFR1LQ9H019 292 aa19.85■□□□□ 0.77
COL2A1-209ENST00000546974 LY75O60449 1722 aa19.85■□□□□ 0.77
COL2A1-209ENST00000546974 PPM1GO15355 546 aaPredicted RBP19.84■□□□□ 0.77
COL2A1-209ENST00000546974 ATF5Q9Y2D1 282 aaPredicted RBP19.84■□□□□ 0.77
COL2A1-209ENST00000546974 PCDH11XQ9BZA7 1347 aa19.83■□□□□ 0.77
COL2A1-209ENST00000546974 PCDH11YQ9BZA8 1340 aa19.83■□□□□ 0.77
COL2A1-209ENST00000546974 ZNF827Q17R98 1081 aa19.83■□□□□ 0.77
COL2A1-209ENST00000546974 NCAPD2Q15021 1401 aa19.83■□□□□ 0.76
COL2A1-209ENST00000546974 QSER1Q2KHR3 1735 aa19.82■□□□□ 0.76
COL2A1-209ENST00000546974 AKT1S1Q96B36 256 aa19.82■□□□□ 0.76
COL2A1-209ENST00000546974 PANK3Q9H999 370 aa19.82■□□□□ 0.76
COL2A1-209ENST00000546974 POLKQ9UBT6 870 aa19.82■□□□□ 0.76
COL2A1-209ENST00000546974 PKD1L3Q7Z443 1732 aa19.8■□□□□ 0.76
COL2A1-209ENST00000546974 SGIP1Q9BQI5 828 aa19.8■□□□□ 0.76
COL2A1-209ENST00000546974 CYP27B1O15528 508 aa19.79■□□□□ 0.76
COL2A1-209ENST00000546974 DCAF8L1A6NGE4 600 aa19.78■□□□□ 0.76
COL2A1-209ENST00000546974 EYA1Q99502 592 aa19.78■□□□□ 0.76
COL2A1-209ENST00000546974 KCNQ4P56696 695 aa19.77■□□□□ 0.76
COL2A1-209ENST00000546974 SLC16A10Q8TF71 515 aa19.77■□□□□ 0.76
COL2A1-209ENST00000546974 CCNL1Q9UK58 526 aaPredicted RBP19.77■□□□□ 0.76
COL2A1-209ENST00000546974 ITGB4P16144 1822 aa19.76■□□□□ 0.75
COL2A1-209ENST00000546974 TUBGCP6Q96RT7 1819 aa19.76■□□□□ 0.75
COL2A1-209ENST00000546974 TNNT2P45379 298 aaPredicted RBP19.76■□□□□ 0.75
COL2A1-209ENST00000546974 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.76■□□□□ 0.75
COL2A1-209ENST00000546974 TFCP2L1Q9NZI6 479 aa19.76■□□□□ 0.75
COL2A1-209ENST00000546974 SPG7Q9UQ90 795 aa19.76■□□□□ 0.75
COL2A1-209ENST00000546974 UTRNP46939 3433 aa19.76■□□□□ 0.75
COL2A1-209ENST00000546974 PNPLA7Q6ZV29 1317 aa19.76■□□□□ 0.75
COL2A1-209ENST00000546974 NKX1-1Q15270 411 aaPredicted RBP19.75■□□□□ 0.75
COL2A1-209ENST00000546974 HMGB2P26583 209 aaKnown RBP19.74■□□□□ 0.75
COL2A1-209ENST00000546974 EIF4A2Q14240 407 aaKnown RBP19.74■□□□□ 0.75
COL2A1-209ENST00000546974 MPRIPQ6WCQ1 1025 aa19.74■□□□□ 0.75
COL2A1-209ENST00000546974 FHDC1Q9C0D6 1143 aaPredicted RBP19.74■□□□□ 0.75
COL2A1-209ENST00000546974 TOGARAM1Q9Y4F4 1720 aa19.73■□□□□ 0.75
COL2A1-209ENST00000546974 ARXQ96QS3 562 aa19.73■□□□□ 0.75
COL2A1-209ENST00000546974 SYT17Q9BSW7 474 aa19.73■□□□□ 0.75
COL2A1-209ENST00000546974 COL24A1Q17RW2 1714 aa19.73■□□□□ 0.75
COL2A1-209ENST00000546974 PLEKHG2Q9H7P9 1386 aa19.72■□□□□ 0.75
COL2A1-209ENST00000546974 SMARCC1Q92922 1105 aaPredicted RBP19.71■□□□□ 0.75
COL2A1-209ENST00000546974 TAF1LQ8IZX4 1826 aa19.71■□□□□ 0.75
COL2A1-209ENST00000546974 PALLDQ8WX93 1383 aa19.7■□□□□ 0.74
COL2A1-209ENST00000546974 MORC1Q86VD1 984 aa19.7■□□□□ 0.74
COL2A1-209ENST00000546974 KNSTRNQ9Y448 316 aa19.7■□□□□ 0.74
COL2A1-209ENST00000546974 C5P01031 1676 aa19.7■□□□□ 0.74
COL2A1-209ENST00000546974 MAP3K5Q99683 1374 aa19.7■□□□□ 0.74
COL2A1-209ENST00000546974 POLD1P28340 1107 aa19.69■□□□□ 0.74
COL2A1-209ENST00000546974 IFNL2Q8IZJ0 200 aa19.69■□□□□ 0.74
COL2A1-209ENST00000546974 PIGBQ92521 554 aa19.69■□□□□ 0.74
COL2A1-209ENST00000546974 IGSF1Q8N6C5 1336 aa19.69■□□□□ 0.74
COL2A1-209ENST00000546974 PHKG2P15735 406 aa19.68■□□□□ 0.74
COL2A1-209ENST00000546974 YY1P25490 414 aa19.68■□□□□ 0.74
COL2A1-209ENST00000546974 KIF7Q2M1P5 1343 aa19.66■□□□□ 0.74
COL2A1-209ENST00000546974 COL23A1Q86Y22 540 aaPredicted RBP19.65■□□□□ 0.74
COL2A1-209ENST00000546974 TMOD3Q9NYL9 352 aa19.65■□□□□ 0.74
COL2A1-209ENST00000546974 MSH5O43196 834 aa19.64■□□□□ 0.73
COL2A1-209ENST00000546974 AMER1Q5JTC6 1135 aaPredicted RBP19.64■□□□□ 0.73
COL2A1-209ENST00000546974 FLAD1Q8NFF5 587 aa19.64■□□□□ 0.73
COL2A1-209ENST00000546974 GOLGB1Q14789 3259 aaKnown RBP19.63■□□□□ 0.73
COL2A1-209ENST00000546974 C4BP0C0L5 1744 aa19.63■□□□□ 0.73
COL2A1-209ENST00000546974 PLEKHO1Q53GL0 409 aaPredicted RBP19.63■□□□□ 0.73
COL2A1-209ENST00000546974 LOC102724428A0A0B4J2F2 783 aa19.61■□□□□ 0.73
COL2A1-209ENST00000546974 HSP90AB1P08238 724 aaKnown RBP19.61■□□□□ 0.73
COL2A1-209ENST00000546974 SIK1P57059 783 aa19.61■□□□□ 0.73
COL2A1-209ENST00000546974 AMOTQ4VCS5 1084 aa19.61■□□□□ 0.73
COL2A1-209ENST00000546974 ASAP1Q9ULH1 1129 aa19.61■□□□□ 0.73
COL2A1-209ENST00000546974 CHD4Q14839 1912 aa19.61■□□□□ 0.73
COL2A1-209ENST00000546974 ERVV-2B6SEH9 535 aa19.6■□□□□ 0.73
COL2A1-209ENST00000546974 AK7Q96M32 723 aa19.6■□□□□ 0.73
COL2A1-209ENST00000546974 UBR3Q6ZT12 1888 aa19.6■□□□□ 0.73
COL2A1-209ENST00000546974 PER1O15534 1290 aaPredicted RBP19.59■□□□□ 0.73
COL2A1-209ENST00000546974 DCAF5Q96JK2 942 aa19.59■□□□□ 0.73
COL2A1-209ENST00000546974 IL13P35225 146 aa19.58■□□□□ 0.72
COL2A1-209ENST00000546974 AEBP1Q8IUX7 1158 aa19.58■□□□□ 0.72
COL2A1-209ENST00000546974 KLHL34Q8N239 644 aa19.58■□□□□ 0.72
COL2A1-209ENST00000546974 ATG3Q9NT62 314 aa19.58■□□□□ 0.72
COL2A1-209ENST00000546974 SULT6B1Q6IMI4 303 aa19.57■□□□□ 0.72
COL2A1-209ENST00000546974 ZNF530Q6P9A1 599 aaPredicted RBP19.57■□□□□ 0.72
COL2A1-209ENST00000546974 LINC00116Q8NCU8 138 aa19.57■□□□□ 0.72
COL2A1-209ENST00000546974 KDRP35968 1356 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms