RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 CHIC2Q9UKJ5 165 aa11.21□□□□□ -0.61
NPAS3-204ENST00000546849 ERVH48-1M5A8F1 160 aa11.2□□□□□ -0.62
NPAS3-204ENST00000546849 KANK4Q5T7N3 995 aaPredicted RBP11.2□□□□□ -0.62
NPAS3-204ENST00000546849 DNAAF2Q9NVR5 837 aaKnown RBP11.2□□□□□ -0.62
NPAS3-204ENST00000546849 PGPEP1Q9NXJ5 209 aa11.2□□□□□ -0.62
NPAS3-204ENST00000546849 DACH1Q9UI36 760 aa11.2□□□□□ -0.62
NPAS3-204ENST00000546849 USP17L15C9J2P7 530 aa11.19□□□□□ -0.62
NPAS3-204ENST00000546849 USP17L10C9JJH3 530 aa11.19□□□□□ -0.62
NPAS3-204ENST00000546849 USP17L13C9JLJ4 530 aa11.19□□□□□ -0.62
NPAS3-204ENST00000546849 USP17L12C9JPN9 530 aa11.19□□□□□ -0.62
NPAS3-204ENST00000546849 USP17L11C9JVI0 530 aa11.19□□□□□ -0.62
NPAS3-204ENST00000546849 USP17L21D6R901 530 aa11.19□□□□□ -0.62
NPAS3-204ENST00000546849 USP17L18D6R9N7 530 aa11.19□□□□□ -0.62
NPAS3-204ENST00000546849 USP17L22D6RA61 530 aa11.19□□□□□ -0.62
NPAS3-204ENST00000546849 USP17L17D6RBQ6 530 aa11.19□□□□□ -0.62
NPAS3-204ENST00000546849 USP17L19D6RCP7 530 aa11.19□□□□□ -0.62
NPAS3-204ENST00000546849 USP17L20D6RJB6 530 aa11.19□□□□□ -0.62
NPAS3-204ENST00000546849 SIAH2O43255 324 aa11.19□□□□□ -0.62
NPAS3-204ENST00000546849 USP17L24Q0WX57 530 aa11.19□□□□□ -0.62
NPAS3-204ENST00000546849 TSGA10IPQ3SY00 556 aa11.19□□□□□ -0.62
NPAS3-204ENST00000546849 OGFOD1Q8N543 542 aa11.19□□□□□ -0.62
NPAS3-204ENST00000546849 ZNF594Q96JF6 807 aaPredicted RBP11.19□□□□□ -0.62
NPAS3-204ENST00000546849 NOVA2Q9UNW9 492 aaKnown RBP11.19□□□□□ -0.62
NPAS3-204ENST00000546849 FAM196BA6NMK8 535 aa11.18□□□□□ -0.62
NPAS3-204ENST00000546849 GTF2IP78347 998 aa11.18□□□□□ -0.62
NPAS3-204ENST00000546849 SRPK2P78362 688 aaKnown RBP11.18□□□□□ -0.62
NPAS3-204ENST00000546849 CDCA7Q9BWT1 371 aaPredicted RBP11.18□□□□□ -0.62
NPAS3-204ENST00000546849 USTQ9Y2C2 406 aa11.18□□□□□ -0.62
NPAS3-204ENST00000546849 CC2D2BQ6DHV5 1058 aa11.17□□□□□ -0.62
NPAS3-204ENST00000546849 SNIP1Q8TAD8 396 aaKnown RBP11.17□□□□□ -0.62
NPAS3-204ENST00000546849 CYLDQ9NQC7 956 aa11.17□□□□□ -0.62
NPAS3-204ENST00000546849 GRM5P41594 1212 aa11.16□□□□□ -0.62
NPAS3-204ENST00000546849 PPP1R26Q5T8A7 1209 aaPredicted RBP11.16□□□□□ -0.62
NPAS3-204ENST00000546849 EMILIN1Q9Y6C2 1016 aa11.16□□□□□ -0.62
NPAS3-204ENST00000546849 NNTQ13423 1086 aa11.15□□□□□ -0.62
NPAS3-204ENST00000546849 CRTC2Q53ET0 693 aaPredicted RBP11.15□□□□□ -0.62
NPAS3-204ENST00000546849 FAM200AQ8TCP9 573 aa11.15□□□□□ -0.62
NPAS3-204ENST00000546849 TMPRSS4Q9NRS4 437 aa11.15□□□□□ -0.62
NPAS3-204ENST00000546849 SMCPP49901 116 aaPredicted RBP11.14□□□□□ -0.63
NPAS3-204ENST00000546849 ELOAQ14241 798 aaKnown RBP11.14□□□□□ -0.63
NPAS3-204ENST00000546849 LARGE2Q8N3Y3 721 aa11.14□□□□□ -0.63
NPAS3-204ENST00000546849 ZNF784Q8NCA9 323 aaPredicted RBP11.14□□□□□ -0.63
NPAS3-204ENST00000546849 AXIN1O15169 862 aa11.13□□□□□ -0.63
NPAS3-204ENST00000546849 SMPD1P17405 629 aa11.13□□□□□ -0.63
NPAS3-204ENST00000546849 CTC1Q2NKJ3 1217 aa11.13□□□□□ -0.63
NPAS3-204ENST00000546849 ANKMY2Q8IV38 441 aa11.13□□□□□ -0.63
NPAS3-204ENST00000546849 TPCN2Q8NHX9 752 aa11.13□□□□□ -0.63
NPAS3-204ENST00000546849 ERVK-9P63128 1117 aa11.12□□□□□ -0.63
NPAS3-204ENST00000546849 PTK7Q13308 1070 aa11.12□□□□□ -0.63
NPAS3-204ENST00000546849 CYP2U1Q7Z449 544 aa11.12□□□□□ -0.63
NPAS3-204ENST00000546849 TRAIPQ9BWF2 469 aa11.12□□□□□ -0.63
NPAS3-204ENST00000546849 SCTRP47872 440 aa11.11□□□□□ -0.63
NPAS3-204ENST00000546849 CLDN10P78369 228 aa11.11□□□□□ -0.63
NPAS3-204ENST00000546849 DPYDQ12882 1025 aa11.11□□□□□ -0.63
NPAS3-204ENST00000546849 CCDC102BQ68D86 513 aa11.11□□□□□ -0.63
NPAS3-204ENST00000546849 NR3C2P08235 984 aa11.1□□□□□ -0.63
NPAS3-204ENST00000546849 B4GALNT3Q6L9W6 998 aa11.1□□□□□ -0.63
NPAS3-204ENST00000546849 STK32AQ8WU08 396 aa11.1□□□□□ -0.63
NPAS3-204ENST00000546849 GMPR2Q9P2T1 348 aaKnown RBP11.1□□□□□ -0.63
NPAS3-204ENST00000546849 J3QL48 77 aa11.09□□□□□ -0.63
NPAS3-204ENST00000546849 SEC13P55735 322 aa11.09□□□□□ -0.63
NPAS3-204ENST00000546849 WDR4P57081 412 aaKnown RBP11.08□□□□□ -0.64
NPAS3-204ENST00000546849 LCE2AQ5TA79 106 aaPredicted RBP11.08□□□□□ -0.64
NPAS3-204ENST00000546849 TMEM164Q5U3C3 297 aa11.08□□□□□ -0.64
NPAS3-204ENST00000546849 AEBP1Q8IUX7 1158 aa11.08□□□□□ -0.64
NPAS3-204ENST00000546849 SIX5Q8N196 739 aa11.08□□□□□ -0.64
NPAS3-204ENST00000546849 KCTD17Q8N5Z5 321 aa11.08□□□□□ -0.64
NPAS3-204ENST00000546849 ZMIZ1Q9ULJ6 1067 aa11.08□□□□□ -0.64
NPAS3-204ENST00000546849 ZBTB7CA1YPR0 619 aa11.07□□□□□ -0.64
NPAS3-204ENST00000546849 KIAA1024Q9UPX6 916 aa11.07□□□□□ -0.64
NPAS3-204ENST00000546849 PCDHGA11Q9Y5H2 935 aa11.07□□□□□ -0.64
NPAS3-204ENST00000546849 ZIC2O95409 532 aaPredicted RBP11.06□□□□□ -0.64
NPAS3-204ENST00000546849 ESCO1Q5FWF5 840 aa11.05□□□□□ -0.64
NPAS3-204ENST00000546849 TREML4Q6UXN2 200 aa11.05□□□□□ -0.64
NPAS3-204ENST00000546849 HINFPQ9BQA5 517 aa11.05□□□□□ -0.64
NPAS3-204ENST00000546849 OSBPL3Q9H4L5 887 aa11.05□□□□□ -0.64
NPAS3-204ENST00000546849 SFI1A8K8P3 1242 aa11.04□□□□□ -0.64
NPAS3-204ENST00000546849 PATL2C9JE40 543 aaKnown RBP11.04□□□□□ -0.64
NPAS3-204ENST00000546849 HPS1Q92902 700 aa11.04□□□□□ -0.64
NPAS3-204ENST00000546849 CARNS1A5YM72 827 aa11.03□□□□□ -0.64
NPAS3-204ENST00000546849 C11orf95C9JLR9 678 aaPredicted RBP11.03□□□□□ -0.64
NPAS3-204ENST00000546849 BACH1O14867 736 aa11.03□□□□□ -0.64
NPAS3-204ENST00000546849 ZBTB7BO15156 539 aaPredicted RBP11.03□□□□□ -0.64
NPAS3-204ENST00000546849 LILRA1O75019 489 aa11.03□□□□□ -0.64
NPAS3-204ENST00000546849 GNRH1P01148 92 aa11.03□□□□□ -0.64
NPAS3-204ENST00000546849 GDF10P55107 478 aa11.03□□□□□ -0.64
NPAS3-204ENST00000546849 SWI5Q1ZZU3 235 aa11.03□□□□□ -0.64
NPAS3-204ENST00000546849 ITPKCQ96DU7 683 aa11.03□□□□□ -0.64
NPAS3-204ENST00000546849 TMEM88BA6NKF7 163 aa11.02□□□□□ -0.65
NPAS3-204ENST00000546849 ADH1AP07327 375 aa11.02□□□□□ -0.65
NPAS3-204ENST00000546849 BRD1O95696 1058 aa11.01□□□□□ -0.65
NPAS3-204ENST00000546849 CBLBQ13191 982 aa11.01□□□□□ -0.65
NPAS3-204ENST00000546849 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.01□□□□□ -0.65
NPAS3-204ENST00000546849 ZFAND3Q9H8U3 227 aa11.01□□□□□ -0.65
NPAS3-204ENST00000546849 ARHGEF10LQ9HCE6 1279 aa11.01□□□□□ -0.65
NPAS3-204ENST00000546849 ATP13A2Q9NQ11 1180 aa11.01□□□□□ -0.65
NPAS3-204ENST00000546849 UPP2O95045 317 aa11□□□□□ -0.65
NPAS3-204ENST00000546849 ZNF358Q9NW07 568 aa11□□□□□ -0.65
NPAS3-204ENST00000546849 TIMP2P16035 220 aa10.99□□□□□ -0.65
NPAS3-204ENST00000546849 ADD1P35611 737 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms