RNA–Protein interactions for RNA: ENST00000546718.5

USP15-206, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 2

Gene USP15, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-206ENST00000546718 KCNQ4P56696 695 aa20.51■□□□□ 0.87
USP15-206ENST00000546718 PUS7Q96PZ0 661 aaKnown RBP20.51■□□□□ 0.87
USP15-206ENST00000546718 TESK2Q96S53 571 aa20.5■□□□□ 0.87
USP15-206ENST00000546718 FBLN1P23142 703 aa20.49■□□□□ 0.87
USP15-206ENST00000546718 HOXC9P31274 260 aa20.49■□□□□ 0.87
USP15-206ENST00000546718 PRIM1P49642 420 aaKnown RBP20.48■□□□□ 0.87
USP15-206ENST00000546718 SLC16A10Q8TF71 515 aa20.48■□□□□ 0.87
USP15-206ENST00000546718 SYTL4Q96C24 671 aaPredicted RBP20.48■□□□□ 0.87
USP15-206ENST00000546718 TONSLQ96HA7 1378 aa20.46■□□□□ 0.87
USP15-206ENST00000546718 COG3Q96JB2 828 aa20.46■□□□□ 0.87
USP15-206ENST00000546718 TFCP2L1Q9NZI6 479 aa20.46■□□□□ 0.87
USP15-206ENST00000546718 GPR162Q16538 588 aa20.45■□□□□ 0.86
USP15-206ENST00000546718 KLHL34Q8N239 644 aa20.45■□□□□ 0.86
USP15-206ENST00000546718 RTL1A6NKG5 1358 aa20.45■□□□□ 0.86
USP15-206ENST00000546718 POLD1P28340 1107 aa20.44■□□□□ 0.86
USP15-206ENST00000546718 NLGN2Q8NFZ4 835 aa20.44■□□□□ 0.86
USP15-206ENST00000546718 ST20-MTHFSA0A0A6YYL1 179 aa20.43■□□□□ 0.86
USP15-206ENST00000546718 AMPHP49418 695 aa20.43■□□□□ 0.86
USP15-206ENST00000546718 ZCRB1Q8TBF4 217 aaKnown RBP20.43■□□□□ 0.86
USP15-206ENST00000546718 C1QTNF8P60827 252 aa20.42■□□□□ 0.86
USP15-206ENST00000546718 C5P01031 1676 aa20.42■□□□□ 0.86
USP15-206ENST00000546718 NBPF6Q5VWK0 638 aa20.41■□□□□ 0.86
USP15-206ENST00000546718 NBPF4Q96M43 638 aa20.41■□□□□ 0.86
USP15-206ENST00000546718 CCNL1Q9UK58 526 aaPredicted RBP20.41■□□□□ 0.86
USP15-206ENST00000546718 SENP3-EIF4A1A0A087X0R7 540 aa20.4■□□□□ 0.86
USP15-206ENST00000546718 RRS1Q15050 365 aaKnown RBP20.4■□□□□ 0.86
USP15-206ENST00000546718 USHBP1Q8N6Y0 703 aa20.39■□□□□ 0.85
USP15-206ENST00000546718 USP47Q96K76 1375 aa20.38■□□□□ 0.85
USP15-206ENST00000546718 PELP1Q8IZL8 1130 aaKnown RBP20.38■□□□□ 0.85
USP15-206ENST00000546718 KIF20BQ96Q89 1820 aa20.37■□□□□ 0.85
USP15-206ENST00000546718 TOGARAM1Q9Y4F4 1720 aa20.37■□□□□ 0.85
USP15-206ENST00000546718 FYB1O15117 783 aa20.37■□□□□ 0.85
USP15-206ENST00000546718 COL23A1Q86Y22 540 aaPredicted RBP20.37■□□□□ 0.85
USP15-206ENST00000546718 TAF1LQ8IZX4 1826 aa20.37■□□□□ 0.85
USP15-206ENST00000546718 SMG6Q86US8 1419 aaKnown RBP20.36■□□□□ 0.85
USP15-206ENST00000546718 CGNL1Q0VF96 1302 aa20.36■□□□□ 0.85
USP15-206ENST00000546718 YBX3P16989 372 aaKnown RBP eCLIP20.36■□□□□ 0.85
USP15-206ENST00000546718 GGNBP2Q9H3C7 697 aa20.36■□□□□ 0.85
USP15-206ENST00000546718 MSL1Q68DK7 614 aa20.34■□□□□ 0.85
USP15-206ENST00000546718 INSRP06213 1382 aa20.34■□□□□ 0.85
USP15-206ENST00000546718 RAPGEF4Q8WZA2 1011 aa20.33■□□□□ 0.85
USP15-206ENST00000546718 PKD1L3Q7Z443 1732 aa20.33■□□□□ 0.84
USP15-206ENST00000546718 PCDH11XQ9BZA7 1347 aa20.32■□□□□ 0.84
USP15-206ENST00000546718 PCDH11YQ9BZA8 1340 aa20.32■□□□□ 0.84
USP15-206ENST00000546718 GIGYF1O75420 1035 aaPredicted RBP20.32■□□□□ 0.84
USP15-206ENST00000546718 HSP90AB2PQ58FF8 381 aa20.32■□□□□ 0.84
USP15-206ENST00000546718 FLT4P35916 1363 aa20.32■□□□□ 0.84
USP15-206ENST00000546718 PALLDQ8WX93 1383 aa20.32■□□□□ 0.84
USP15-206ENST00000546718 C4BP0C0L5 1744 aa20.31■□□□□ 0.84
USP15-206ENST00000546718 SLC24A1O60721 1099 aa20.31■□□□□ 0.84
USP15-206ENST00000546718 ITGB4P16144 1822 aa20.31■□□□□ 0.84
USP15-206ENST00000546718 TATP17735 454 aaPredicted RBP20.3■□□□□ 0.84
USP15-206ENST00000546718 CYP27B1O15528 508 aa20.29■□□□□ 0.84
USP15-206ENST00000546718 ANKRD26Q9UPS8 1709 aa20.29■□□□□ 0.84
USP15-206ENST00000546718 KIF24Q5T7B8 1368 aa20.29■□□□□ 0.84
USP15-206ENST00000546718 NCAPD2Q15021 1401 aa20.28■□□□□ 0.84
USP15-206ENST00000546718 AMIGO3Q86WK7 504 aa20.28■□□□□ 0.84
USP15-206ENST00000546718 UBR3Q6ZT12 1888 aa20.27■□□□□ 0.84
USP15-206ENST00000546718 GRIN3BO60391 1043 aa20.27■□□□□ 0.84
USP15-206ENST00000546718 TMF1P82094 1093 aa20.27■□□□□ 0.84
USP15-206ENST00000546718 MPRIPQ6WCQ1 1025 aa20.26■□□□□ 0.83
USP15-206ENST00000546718 MAP2P11137 1827 aaKnown RBP20.25■□□□□ 0.83
USP15-206ENST00000546718 EMILIN1Q9Y6C2 1016 aa20.25■□□□□ 0.83
USP15-206ENST00000546718 ATP10DQ9P241 1426 aa20.25■□□□□ 0.83
USP15-206ENST00000546718 CD2APQ9Y5K6 639 aa20.24■□□□□ 0.83
USP15-206ENST00000546718 ADCY9O60503 1353 aa20.23■□□□□ 0.83
USP15-206ENST00000546718 FLAD1Q8NFF5 587 aa20.23■□□□□ 0.83
USP15-206ENST00000546718 CARD14Q9BXL6 1004 aa20.23■□□□□ 0.83
USP15-206ENST00000546718 NSD3Q9BZ95 1437 aa20.22■□□□□ 0.83
USP15-206ENST00000546718 SMIM5Q71RC9 77 aa20.22■□□□□ 0.83
USP15-206ENST00000546718 PIGBQ92521 554 aa20.21■□□□□ 0.83
USP15-206ENST00000546718 AK7Q96M32 723 aa20.2■□□□□ 0.82
USP15-206ENST00000546718 PHF14O94880 888 aa20.19■□□□□ 0.82
USP15-206ENST00000546718 NKX1-1Q15270 411 aaPredicted RBP20.19■□□□□ 0.82
USP15-206ENST00000546718 SMARCC1Q92922 1105 aaPredicted RBP20.19■□□□□ 0.82
USP15-206ENST00000546718 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.18■□□□□ 0.82
USP15-206ENST00000546718 HMGB2P26583 209 aaKnown RBP20.17■□□□□ 0.82
USP15-206ENST00000546718 CDCA8Q53HL2 280 aa20.17■□□□□ 0.82
USP15-206ENST00000546718 LINC00116Q8NCU8 138 aa20.17■□□□□ 0.82
USP15-206ENST00000546718 IGSF1Q8N6C5 1336 aa20.16■□□□□ 0.82
USP15-206ENST00000546718 LOC102724428A0A0B4J2F2 783 aa20.15■□□□□ 0.82
USP15-206ENST00000546718 PPM1GO15355 546 aaPredicted RBP20.15■□□□□ 0.82
USP15-206ENST00000546718 SSFA2P28290 1259 aa20.15■□□□□ 0.82
USP15-206ENST00000546718 SIK1P57059 783 aa20.15■□□□□ 0.82
USP15-206ENST00000546718 WWC3Q9ULE0 1092 aa20.15■□□□□ 0.82
USP15-206ENST00000546718 CICQ96RK0 1608 aaPredicted RBP20.14■□□□□ 0.81
USP15-206ENST00000546718 WASHC2AQ641Q2 1341 aa20.14■□□□□ 0.81
USP15-206ENST00000546718 ITPK1Q13572 414 aa20.14■□□□□ 0.81
USP15-206ENST00000546718 EYA1Q99502 592 aa20.14■□□□□ 0.81
USP15-206ENST00000546718 SPG7Q9UQ90 795 aa20.14■□□□□ 0.81
USP15-206ENST00000546718 KIAA1551Q9HCM1 1747 aa20.13■□□□□ 0.81
USP15-206ENST00000546718 GPBP1L1Q9HC44 474 aaPredicted RBP20.13■□□□□ 0.81
USP15-206ENST00000546718 ASAP1Q9ULH1 1129 aa20.13■□□□□ 0.81
USP15-206ENST00000546718 ZNF526Q8TF50 670 aaPredicted RBP20.12■□□□□ 0.81
USP15-206ENST00000546718 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.12■□□□□ 0.812e-9■■□□□ 14.5
USP15-206ENST00000546718 TMOD3Q9NYL9 352 aa20.12■□□□□ 0.81
USP15-206ENST00000546718 KIF13BQ9NQT8 1826 aa20.11■□□□□ 0.81
USP15-206ENST00000546718 KDRP35968 1356 aa20.11■□□□□ 0.81
USP15-206ENST00000546718 PHKG2P15735 406 aa20.11■□□□□ 0.81
USP15-206ENST00000546718 ADRA2BP18089 450 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms