RNA–Protein interactions for RNA: ENST00000546619.5

CALCOCO1-204, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 4

Gene CALCOCO1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-204ENST00000546619 USP47Q96K76 1375 aa21.29■■□□□ 1
CALCOCO1-204ENST00000546619 MAP3K5Q99683 1374 aa21.29■■□□□ 1
CALCOCO1-204ENST00000546619 FYB1O15117 783 aa21.29■■□□□ 1
CALCOCO1-204ENST00000546619 TFCP2L1Q9NZI6 479 aa21.29■■□□□ 1
CALCOCO1-204ENST00000546619 SMG6Q86US8 1419 aaKnown RBP21.29■■□□□ 1
CALCOCO1-204ENST00000546619 PNPLA7Q6ZV29 1317 aa21.29■■□□□ 1
CALCOCO1-204ENST00000546619 RGPD2P0DJD1 1756 aa21.28■■□□□ 1
CALCOCO1-204ENST00000546619 NSD2O96028 1365 aa21.28■■□□□ 1
CALCOCO1-204ENST00000546619 NBPF6Q5VWK0 638 aa21.28■■□□□ 1
CALCOCO1-204ENST00000546619 USHBP1Q8N6Y0 703 aa21.28■■□□□ 1
CALCOCO1-204ENST00000546619 SLC16A10Q8TF71 515 aa21.28■■□□□ 1
CALCOCO1-204ENST00000546619 NBPF4Q96M43 638 aa21.28■■□□□ 1
CALCOCO1-204ENST00000546619 UTRNP46939 3433 aa21.27■■□□□ 1
CALCOCO1-204ENST00000546619 POLD1P28340 1107 aa21.27■■□□□ 1
CALCOCO1-204ENST00000546619 SHANK3Q9BYB0 1731 aa21.26■□□□□ 0.99
CALCOCO1-204ENST00000546619 KLHL34Q8N239 644 aa21.26■□□□□ 0.99
CALCOCO1-204ENST00000546619 ZNF784Q8NCA9 323 aaPredicted RBP21.26■□□□□ 0.99
CALCOCO1-204ENST00000546619 RAPGEF4Q8WZA2 1011 aa21.26■□□□□ 0.99
CALCOCO1-204ENST00000546619 QSER1Q2KHR3 1735 aa21.25■□□□□ 0.99
CALCOCO1-204ENST00000546619 CCNL1Q9UK58 526 aaPredicted RBP21.25■□□□□ 0.99
CALCOCO1-204ENST00000546619 CGNL1Q0VF96 1302 aa21.25■□□□□ 0.99
CALCOCO1-204ENST00000546619 TATP17735 454 aaPredicted RBP21.23■□□□□ 0.99
CALCOCO1-204ENST00000546619 CDCA8Q53HL2 280 aa21.23■□□□□ 0.99
CALCOCO1-204ENST00000546619 LY75O60449 1722 aa21.23■□□□□ 0.99
CALCOCO1-204ENST00000546619 GPR162Q16538 588 aa21.22■□□□□ 0.99
CALCOCO1-204ENST00000546619 HSP90AB2PQ58FF8 381 aa21.22■□□□□ 0.99
CALCOCO1-204ENST00000546619 INSRP06213 1382 aa21.22■□□□□ 0.99
CALCOCO1-204ENST00000546619 TUBGCP6Q96RT7 1819 aa21.21■□□□□ 0.99
CALCOCO1-204ENST00000546619 FLT4P35916 1363 aa21.21■□□□□ 0.99
CALCOCO1-204ENST00000546619 MSH5O43196 834 aa21.2■□□□□ 0.98
CALCOCO1-204ENST00000546619 KIF20BQ96Q89 1820 aa21.2■□□□□ 0.98
CALCOCO1-204ENST00000546619 PCDH11XQ9BZA7 1347 aa21.19■□□□□ 0.98
CALCOCO1-204ENST00000546619 PCDH11YQ9BZA8 1340 aa21.19■□□□□ 0.98
CALCOCO1-204ENST00000546619 PELP1Q8IZL8 1130 aaKnown RBP21.18■□□□□ 0.98
CALCOCO1-204ENST00000546619 KIF24Q5T7B8 1368 aa21.18■□□□□ 0.98
CALCOCO1-204ENST00000546619 COL24A1Q17RW2 1714 aa21.18■□□□□ 0.98
CALCOCO1-204ENST00000546619 TRIM26Q12899 539 aaPredicted RBP21.17■□□□□ 0.98
CALCOCO1-204ENST00000546619 CHD4Q14839 1912 aa21.17■□□□□ 0.98
CALCOCO1-204ENST00000546619 NSD3Q9BZ95 1437 aa21.16■□□□□ 0.98
CALCOCO1-204ENST00000546619 CARD14Q9BXL6 1004 aa21.16■□□□□ 0.98
CALCOCO1-204ENST00000546619 COL23A1Q86Y22 540 aaPredicted RBP21.15■□□□□ 0.98
CALCOCO1-204ENST00000546619 NLGN2Q8NFZ4 835 aa21.15■□□□□ 0.98
CALCOCO1-204ENST00000546619 EMILIN1Q9Y6C2 1016 aa21.15■□□□□ 0.98
CALCOCO1-204ENST00000546619 MPRIPQ6WCQ1 1025 aa21.14■□□□□ 0.97
CALCOCO1-204ENST00000546619 PALLDQ8WX93 1383 aa21.13■□□□□ 0.97
CALCOCO1-204ENST00000546619 CYP27B1O15528 508 aa21.13■□□□□ 0.97
CALCOCO1-204ENST00000546619 MSL1Q68DK7 614 aa21.13■□□□□ 0.97
CALCOCO1-204ENST00000546619 PPM1GO15355 546 aaPredicted RBP21.12■□□□□ 0.97
CALCOCO1-204ENST00000546619 C5P01031 1676 aa21.12■□□□□ 0.97
CALCOCO1-204ENST00000546619 HMGB2P26583 209 aaKnown RBP21.1■□□□□ 0.97
CALCOCO1-204ENST00000546619 GOLGB1Q14789 3259 aaKnown RBP21.1■□□□□ 0.97
CALCOCO1-204ENST00000546619 FLAD1Q8NFF5 587 aa21.09■□□□□ 0.97
CALCOCO1-204ENST00000546619 SMARCC1Q92922 1105 aaPredicted RBP21.08■□□□□ 0.97
CALCOCO1-204ENST00000546619 TOGARAM1Q9Y4F4 1720 aa21.08■□□□□ 0.97
CALCOCO1-204ENST00000546619 PKD1L3Q7Z443 1732 aa21.07■□□□□ 0.96
CALCOCO1-204ENST00000546619 NCAPD2Q15021 1401 aa21.07■□□□□ 0.96
CALCOCO1-204ENST00000546619 SPG7Q9UQ90 795 aa21.07■□□□□ 0.96
CALCOCO1-204ENST00000546619 YBX3P16989 372 aaKnown RBP eCLIP21.06■□□□□ 0.96
CALCOCO1-204ENST00000546619 C1QTNF8P60827 252 aa21.06■□□□□ 0.96
CALCOCO1-204ENST00000546619 PIGBQ92521 554 aa21.06■□□□□ 0.96
CALCOCO1-204ENST00000546619 AK7Q96M32 723 aa21.06■□□□□ 0.96
CALCOCO1-204ENST00000546619 WASHC2AQ641Q2 1341 aa21.05■□□□□ 0.96
CALCOCO1-204ENST00000546619 GRIN3BO60391 1043 aa21.05■□□□□ 0.96
CALCOCO1-204ENST00000546619 TIMELESSQ9UNS1 1208 aa21.05■□□□□ 0.96
CALCOCO1-204ENST00000546619 ANKRD26Q9UPS8 1709 aa21.04■□□□□ 0.96
CALCOCO1-204ENST00000546619 TAF1LQ8IZX4 1826 aa21.04■□□□□ 0.96
CALCOCO1-204ENST00000546619 SENP3-EIF4A1A0A087X0R7 540 aa21.04■□□□□ 0.96
CALCOCO1-204ENST00000546619 NKX1-1Q15270 411 aaPredicted RBP21.04■□□□□ 0.96
CALCOCO1-204ENST00000546619 EYA1Q99502 592 aa21.04■□□□□ 0.96
CALCOCO1-204ENST00000546619 ITGB4P16144 1822 aa21.04■□□□□ 0.96
CALCOCO1-204ENST00000546619 C4BP0C0L5 1744 aa21.04■□□□□ 0.96
CALCOCO1-204ENST00000546619 POLR3GLQ9BT43 218 aa21.03■□□□□ 0.96
CALCOCO1-204ENST00000546619 GIGYF1O75420 1035 aaPredicted RBP21.02■□□□□ 0.96
CALCOCO1-204ENST00000546619 PHF14O94880 888 aa21.02■□□□□ 0.96
CALCOCO1-204ENST00000546619 CD2APQ9Y5K6 639 aa21.02■□□□□ 0.96
CALCOCO1-204ENST00000546619 AMIGO3Q86WK7 504 aa21.01■□□□□ 0.95
CALCOCO1-204ENST00000546619 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.01■□□□□ 0.95
CALCOCO1-204ENST00000546619 TMOD3Q9NYL9 352 aa21.01■□□□□ 0.95
CALCOCO1-204ENST00000546619 POLKQ9UBT6 870 aa21.01■□□□□ 0.95
CALCOCO1-204ENST00000546619 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21■□□□□ 0.95
CALCOCO1-204ENST00000546619 LOC102724428A0A0B4J2F2 783 aa20.99■□□□□ 0.95
CALCOCO1-204ENST00000546619 TNNT2P45379 298 aaPredicted RBP20.99■□□□□ 0.95
CALCOCO1-204ENST00000546619 SIK1P57059 783 aa20.99■□□□□ 0.95
CALCOCO1-204ENST00000546619 SMIM5Q71RC9 77 aa20.99■□□□□ 0.95
CALCOCO1-204ENST00000546619 PHKG2P15735 406 aa20.98■□□□□ 0.95
CALCOCO1-204ENST00000546619 IFNL2Q8IZJ0 200 aa20.98■□□□□ 0.95
CALCOCO1-204ENST00000546619 LINC00116Q8NCU8 138 aa20.98■□□□□ 0.95
CALCOCO1-204ENST00000546619 MAP2P11137 1827 aaKnown RBP20.97■□□□□ 0.95
CALCOCO1-204ENST00000546619 SSFA2P28290 1259 aa20.97■□□□□ 0.95
CALCOCO1-204ENST00000546619 EIF4A2Q14240 407 aaKnown RBP20.97■□□□□ 0.95
CALCOCO1-204ENST00000546619 ASAP1Q9ULH1 1129 aa20.97■□□□□ 0.95
CALCOCO1-204ENST00000546619 PCGF6Q9BYE7 350 aa20.96■□□□□ 0.95
CALCOCO1-204ENST00000546619 CLSPNQ9HAW4 1339 aa20.96■□□□□ 0.95
CALCOCO1-204ENST00000546619 UBR3Q6ZT12 1888 aa20.96■□□□□ 0.95
CALCOCO1-204ENST00000546619 GNPATO15228 680 aa20.94■□□□□ 0.94
CALCOCO1-204ENST00000546619 ATP6V1AP38606 617 aa20.94■□□□□ 0.94
CALCOCO1-204ENST00000546619 ITPK1Q13572 414 aa20.94■□□□□ 0.94
CALCOCO1-204ENST00000546619 ATG3Q9NT62 314 aa20.93■□□□□ 0.94
CALCOCO1-204ENST00000546619 IGSF1Q8N6C5 1336 aa20.92■□□□□ 0.94
CALCOCO1-204ENST00000546619 PLEKHG2Q9H7P9 1386 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms