RNA–Protein interactions for RNA: ENST00000546538.1

CHERP-204, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 1 (best)

Gene CHERP, Length 1,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-204ENST00000546538 TIMELESSQ9UNS1 1208 aa26.06■■□□□ 1.76
CHERP-204ENST00000546538 NSD3Q9BZ95 1437 aa26.06■■□□□ 1.76
CHERP-204ENST00000546538 SGIP1Q9BQI5 828 aa26.05■■□□□ 1.76
CHERP-204ENST00000546538 CDCA8Q53HL2 280 aa26.05■■□□□ 1.76
CHERP-204ENST00000546538 ZCRB1Q8TBF4 217 aaKnown RBP26.05■■□□□ 1.76
CHERP-204ENST00000546538 PCGF6Q9BYE7 350 aa26.05■■□□□ 1.76
CHERP-204ENST00000546538 INSRP06213 1382 aa26.04■■□□□ 1.76
CHERP-204ENST00000546538 PRIM1P49642 420 aaKnown RBP26.04■■□□□ 1.76
CHERP-204ENST00000546538 CLSPNQ9HAW4 1339 aa26.04■■□□□ 1.76
CHERP-204ENST00000546538 KCNQ4P56696 695 aa26.02■■□□□ 1.76
CHERP-204ENST00000546538 FLT4P35916 1363 aa26.02■■□□□ 1.76
CHERP-204ENST00000546538 LY75O60449 1722 aa26.02■■□□□ 1.76
CHERP-204ENST00000546538 AKT1S1Q96B36 256 aa26.01■■□□□ 1.75
CHERP-204ENST00000546538 EMILIN1Q9Y6C2 1016 aa26.01■■□□□ 1.75
CHERP-204ENST00000546538 ANKRD26Q9UPS8 1709 aa26■■□□□ 1.75
CHERP-204ENST00000546538 MTFR1LQ9H019 292 aa26■■□□□ 1.75
CHERP-204ENST00000546538 TUBGCP6Q96RT7 1819 aa26■■□□□ 1.75
CHERP-204ENST00000546538 KIF24Q5T7B8 1368 aa25.99■■□□□ 1.75
CHERP-204ENST00000546538 SYTL4Q96C24 671 aaPredicted RBP25.98■■□□□ 1.75
CHERP-204ENST00000546538 SMG6Q86US8 1419 aaKnown RBP25.98■■□□□ 1.75
CHERP-204ENST00000546538 QSER1Q2KHR3 1735 aa25.97■■□□□ 1.75
CHERP-204ENST00000546538 NCAPD2Q15021 1401 aa25.96■■□□□ 1.75
CHERP-204ENST00000546538 SLC27A3Q5K4L6 730 aa25.96■■□□□ 1.75
CHERP-204ENST00000546538 CGNL1Q0VF96 1302 aa25.95■■□□□ 1.74
CHERP-204ENST00000546538 FHDC1Q9C0D6 1143 aaPredicted RBP25.95■■□□□ 1.74
CHERP-204ENST00000546538 GOLGB1Q14789 3259 aaKnown RBP25.94■■□□□ 1.74
CHERP-204ENST00000546538 RAPGEF4Q8WZA2 1011 aa25.94■■□□□ 1.74
CHERP-204ENST00000546538 TOGARAM1Q9Y4F4 1720 aa25.94■■□□□ 1.74
CHERP-204ENST00000546538 PNPLA7Q6ZV29 1317 aa25.93■■□□□ 1.74
CHERP-204ENST00000546538 COL24A1Q17RW2 1714 aa25.92■■□□□ 1.74
CHERP-204ENST00000546538 PKD1L3Q7Z443 1732 aa25.92■■□□□ 1.74
CHERP-204ENST00000546538 SYT17Q9BSW7 474 aa25.92■■□□□ 1.74
CHERP-204ENST00000546538 CYP27B1O15528 508 aa25.91■■□□□ 1.74
CHERP-204ENST00000546538 TATP17735 454 aaPredicted RBP25.91■■□□□ 1.74
CHERP-204ENST00000546538 MAP2P11137 1827 aaKnown RBP25.91■■□□□ 1.74
CHERP-204ENST00000546538 YY1P25490 414 aa25.89■■□□□ 1.74
CHERP-204ENST00000546538 WASHC2AQ641Q2 1341 aa25.88■■□□□ 1.73
CHERP-204ENST00000546538 PCDH11XQ9BZA7 1347 aa25.88■■□□□ 1.73
CHERP-204ENST00000546538 PCDH11YQ9BZA8 1340 aa25.88■■□□□ 1.73
CHERP-204ENST00000546538 HSPA5P11021 654 aaKnown RBP25.88■■□□□ 1.73
CHERP-204ENST00000546538 POLKQ9UBT6 870 aa25.88■■□□□ 1.73
CHERP-204ENST00000546538 PPM1GO15355 546 aaPredicted RBP25.87■■□□□ 1.73
CHERP-204ENST00000546538 ARXQ96QS3 562 aa25.87■■□□□ 1.73
CHERP-204ENST00000546538 CCNL1Q9UK58 526 aaPredicted RBP25.87■■□□□ 1.73
CHERP-204ENST00000546538 POLR3GLQ9BT43 218 aa25.86■■□□□ 1.73
CHERP-204ENST00000546538 ITGB4P16144 1822 aa25.85■■□□□ 1.73
CHERP-204ENST00000546538 MAP3K5Q99683 1374 aa25.84■■□□□ 1.73
CHERP-204ENST00000546538 EYA1Q99502 592 aa25.84■■□□□ 1.73
CHERP-204ENST00000546538 TFCP2L1Q9NZI6 479 aa25.84■■□□□ 1.73
CHERP-204ENST00000546538 C5P01031 1676 aa25.83■■□□□ 1.73
CHERP-204ENST00000546538 SLC16A10Q8TF71 515 aa25.82■■□□□ 1.72
CHERP-204ENST00000546538 TAF1LQ8IZX4 1826 aa25.82■■□□□ 1.72
CHERP-204ENST00000546538 EIF4G2P78344 907 aaKnown RBP eCLIP25.81■■□□□ 1.72
CHERP-204ENST00000546538 MPRIPQ6WCQ1 1025 aa25.8■■□□□ 1.72
CHERP-204ENST00000546538 PALLDQ8WX93 1383 aa25.8■■□□□ 1.72
CHERP-204ENST00000546538 TNNT2P45379 298 aaPredicted RBP25.8■■□□□ 1.72
CHERP-204ENST00000546538 COL23A1Q86Y22 540 aaPredicted RBP25.8■■□□□ 1.72
CHERP-204ENST00000546538 EIF4A2Q14240 407 aaKnown RBP25.79■■□□□ 1.72
CHERP-204ENST00000546538 NKX1-1Q15270 411 aaPredicted RBP25.79■■□□□ 1.72
CHERP-204ENST00000546538 PANK3Q9H999 370 aa25.79■■□□□ 1.72
CHERP-204ENST00000546538 DCAF8L1A6NGE4 600 aa25.78■■□□□ 1.72
CHERP-204ENST00000546538 AMIGO3Q86WK7 504 aa25.77■■□□□ 1.72
CHERP-204ENST00000546538 CCER1Q8TC90 406 aaPredicted RBP25.77■■□□□ 1.72
CHERP-204ENST00000546538 PIGBQ92521 554 aa25.77■■□□□ 1.72
CHERP-204ENST00000546538 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.73■■□□□ 1.71
CHERP-204ENST00000546538 C4BP0C0L5 1744 aa25.73■■□□□ 1.71
CHERP-204ENST00000546538 SPG7Q9UQ90 795 aa25.72■■□□□ 1.71
CHERP-204ENST00000546538 PHKG2P15735 406 aa25.71■■□□□ 1.71
CHERP-204ENST00000546538 NLGN2Q8NFZ4 835 aa25.71■■□□□ 1.71
CHERP-204ENST00000546538 IGSF1Q8N6C5 1336 aa25.71■■□□□ 1.71
CHERP-204ENST00000546538 POLD1P28340 1107 aa25.71■■□□□ 1.71
CHERP-204ENST00000546538 SMIM5Q71RC9 77 aa25.71■■□□□ 1.71
CHERP-204ENST00000546538 MSL1Q68DK7 614 aa25.7■■□□□ 1.7
CHERP-204ENST00000546538 UBR3Q6ZT12 1888 aa25.69■■□□□ 1.7
CHERP-204ENST00000546538 KLHL34Q8N239 644 aa25.69■■□□□ 1.7
CHERP-204ENST00000546538 CHD4Q14839 1912 aa25.68■■□□□ 1.7
CHERP-204ENST00000546538 MSH5O43196 834 aa25.67■■□□□ 1.7
CHERP-204ENST00000546538 SMARCC1Q92922 1105 aaPredicted RBP25.67■■□□□ 1.7
CHERP-204ENST00000546538 ASAP1Q9ULH1 1129 aa25.67■■□□□ 1.7
CHERP-204ENST00000546538 IFNL2Q8IZJ0 200 aa25.66■■□□□ 1.7
CHERP-204ENST00000546538 ZNF784Q8NCA9 323 aaPredicted RBP25.65■■□□□ 1.7
CHERP-204ENST00000546538 LINC00116Q8NCU8 138 aa25.65■■□□□ 1.7
CHERP-204ENST00000546538 LOC102724428A0A0B4J2F2 783 aa25.64■■□□□ 1.7
CHERP-204ENST00000546538 SIK1P57059 783 aa25.64■■□□□ 1.7
CHERP-204ENST00000546538 ITPK1Q13572 414 aa25.64■■□□□ 1.7
CHERP-204ENST00000546538 PLEKHG2Q9H7P9 1386 aa25.64■■□□□ 1.69
CHERP-204ENST00000546538 AEBP1Q8IUX7 1158 aa25.63■■□□□ 1.69
CHERP-204ENST00000546538 TMOD3Q9NYL9 352 aa25.63■■□□□ 1.69
CHERP-204ENST00000546538 ATG3Q9NT62 314 aa25.63■■□□□ 1.69
CHERP-204ENST00000546538 KDM6AO15550 1401 aaPredicted RBP25.62■■□□□ 1.69
CHERP-204ENST00000546538 GPR162Q16538 588 aa25.61■■□□□ 1.69
CHERP-204ENST00000546538 AMER1Q5JTC6 1135 aaPredicted RBP25.61■■□□□ 1.69
CHERP-204ENST00000546538 MORC1Q86VD1 984 aa25.61■■□□□ 1.69
CHERP-204ENST00000546538 KIF7Q2M1P5 1343 aa25.61■■□□□ 1.69
CHERP-204ENST00000546538 KDRP35968 1356 aa25.6■■□□□ 1.69
CHERP-204ENST00000546538 AK7Q96M32 723 aa25.6■■□□□ 1.69
CHERP-204ENST00000546538 SLC4A9Q96Q91 983 aa25.6■■□□□ 1.69
CHERP-204ENST00000546538 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.59■■□□□ 1.69
CHERP-204ENST00000546538 YBX3P16989 372 aaKnown RBP eCLIP25.59■■□□□ 1.698e-8■■□□□ 12.4
CHERP-204ENST00000546538 FLAD1Q8NFF5 587 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms