RNA–Protein interactions for RNA: ENST00000546371.1

PRKD1-205, Transcript of protein kinase D1, humanhuman

TSL 3

Gene PRKD1, Length 585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-205ENST00000546371 COG3Q96JB2 828 aa15.83■□□□□ 0.12
PRKD1-205ENST00000546371 MAP3K19Q56UN5 1328 aa15.83■□□□□ 0.12
PRKD1-205ENST00000546371 NSD2O96028 1365 aa15.83■□□□□ 0.12
PRKD1-205ENST00000546371 COL24A1Q17RW2 1714 aa15.82■□□□□ 0.12
PRKD1-205ENST00000546371 QSER1Q2KHR3 1735 aa15.82■□□□□ 0.12
PRKD1-205ENST00000546371 AMPHP49418 695 aa15.82■□□□□ 0.12
PRKD1-205ENST00000546371 COL23A1Q86Y22 540 aaPredicted RBP15.82■□□□□ 0.12
PRKD1-205ENST00000546371 CCNL1Q9UK58 526 aaPredicted RBP15.82■□□□□ 0.12
PRKD1-205ENST00000546371 GOLGB1Q14789 3259 aaKnown RBP15.81■□□□□ 0.12
PRKD1-205ENST00000546371 CGNL1Q0VF96 1302 aa15.8■□□□□ 0.12
PRKD1-205ENST00000546371 SLC24A1O60721 1099 aa15.8■□□□□ 0.12
PRKD1-205ENST00000546371 YBX3P16989 372 aaKnown RBP eCLIP15.8■□□□□ 0.12
PRKD1-205ENST00000546371 FBLN1P23142 703 aa15.8■□□□□ 0.12
PRKD1-205ENST00000546371 HMGB2P26583 209 aaKnown RBP15.8■□□□□ 0.12
PRKD1-205ENST00000546371 KAT6BQ8WYB5 2073 aa15.79■□□□□ 0.12
PRKD1-205ENST00000546371 USP47Q96K76 1375 aa15.79■□□□□ 0.12
PRKD1-205ENST00000546371 MSH5O43196 834 aa15.79■□□□□ 0.12
PRKD1-205ENST00000546371 NBPF6Q5VWK0 638 aa15.79■□□□□ 0.12
PRKD1-205ENST00000546371 NBPF4Q96M43 638 aa15.79■□□□□ 0.12
PRKD1-205ENST00000546371 TESK2Q96S53 571 aa15.79■□□□□ 0.12
PRKD1-205ENST00000546371 FAM208AQ9UK61 1670 aaKnown RBP15.78■□□□□ 0.12
PRKD1-205ENST00000546371 CD2APQ9Y5K6 639 aa15.77■□□□□ 0.12
PRKD1-205ENST00000546371 MEGF6O75095 1541 aa15.77■□□□□ 0.11
PRKD1-205ENST00000546371 FLAD1Q8NFF5 587 aa15.76■□□□□ 0.11
PRKD1-205ENST00000546371 LY75O60449 1722 aa15.76■□□□□ 0.11
PRKD1-205ENST00000546371 RTL1A6NKG5 1358 aa15.75■□□□□ 0.11
PRKD1-205ENST00000546371 ST20-MTHFSA0A0A6YYL1 179 aa15.75■□□□□ 0.11
PRKD1-205ENST00000546371 FYB1O15117 783 aa15.75■□□□□ 0.11
PRKD1-205ENST00000546371 IFFO2Q5TF58 517 aa15.75■□□□□ 0.11
PRKD1-205ENST00000546371 RAPGEF4Q8WZA2 1011 aa15.75■□□□□ 0.11
PRKD1-205ENST00000546371 CEP350Q5VT06 3117 aa15.74■□□□□ 0.11
PRKD1-205ENST00000546371 RRS1Q15050 365 aaKnown RBP15.74■□□□□ 0.11
PRKD1-205ENST00000546371 MSL1Q68DK7 614 aa15.74■□□□□ 0.11
PRKD1-205ENST00000546371 SHANK3Q9BYB0 1731 aa15.74■□□□□ 0.11
PRKD1-205ENST00000546371 TATP17735 454 aaPredicted RBP15.73■□□□□ 0.11
PRKD1-205ENST00000546371 DOT1LQ8TEK3 1739 aa15.73■□□□□ 0.11
PRKD1-205ENST00000546371 TUBGCP6Q96RT7 1819 aa15.73■□□□□ 0.11
PRKD1-205ENST00000546371 USHBP1Q8N6Y0 703 aa15.72■□□□□ 0.11
PRKD1-205ENST00000546371 GGNBP2Q9H3C7 697 aa15.71■□□□□ 0.11
PRKD1-205ENST00000546371 TONSLQ96HA7 1378 aa15.71■□□□□ 0.11
PRKD1-205ENST00000546371 PCDH11XQ9BZA7 1347 aa15.7■□□□□ 0.1
PRKD1-205ENST00000546371 PCDH11YQ9BZA8 1340 aa15.7■□□□□ 0.1
PRKD1-205ENST00000546371 ATP10DQ9P241 1426 aa15.7■□□□□ 0.1
PRKD1-205ENST00000546371 HSP90AB2PQ58FF8 381 aa15.7■□□□□ 0.1
PRKD1-205ENST00000546371 MPRIPQ6WCQ1 1025 aa15.7■□□□□ 0.1
PRKD1-205ENST00000546371 SMARCC1Q92922 1105 aaPredicted RBP15.7■□□□□ 0.1
PRKD1-205ENST00000546371 INSRP06213 1382 aa15.7■□□□□ 0.1
PRKD1-205ENST00000546371 PALLDQ8WX93 1383 aa15.7■□□□□ 0.1
PRKD1-205ENST00000546371 SMG6Q86US8 1419 aaKnown RBP15.69■□□□□ 0.1
PRKD1-205ENST00000546371 CYP27B1O15528 508 aa15.69■□□□□ 0.1
PRKD1-205ENST00000546371 GPBP1L1Q9HC44 474 aaPredicted RBP15.69■□□□□ 0.1
PRKD1-205ENST00000546371 KIF24Q5T7B8 1368 aa15.68■□□□□ 0.1
PRKD1-205ENST00000546371 RGPD2P0DJD1 1756 aa15.67■□□□□ 0.1
PRKD1-205ENST00000546371 NKX1-1Q15270 411 aaPredicted RBP15.67■□□□□ 0.1
PRKD1-205ENST00000546371 ADCY9O60503 1353 aa15.66■□□□□ 0.1
PRKD1-205ENST00000546371 FLT4P35916 1363 aa15.66■□□□□ 0.1
PRKD1-205ENST00000546371 AMIGO3Q86WK7 504 aa15.66■□□□□ 0.1
PRKD1-205ENST00000546371 PIGBQ92521 554 aa15.66■□□□□ 0.1
PRKD1-205ENST00000546371 AK7Q96M32 723 aa15.66■□□□□ 0.1
PRKD1-205ENST00000546371 HSPA6P17066 643 aa15.65■□□□□ 0.1
PRKD1-205ENST00000546371 TMF1P82094 1093 aa15.65■□□□□ 0.1
PRKD1-205ENST00000546371 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.64■□□□□ 0.09
PRKD1-205ENST00000546371 SSFA2P28290 1259 aa15.64■□□□□ 0.09
PRKD1-205ENST00000546371 C5P01031 1676 aa15.63■□□□□ 0.09
PRKD1-205ENST00000546371 NSD3Q9BZ95 1437 aa15.63■□□□□ 0.09
PRKD1-205ENST00000546371 SMIM5Q71RC9 77 aa15.63■□□□□ 0.09
PRKD1-205ENST00000546371 IGSF1Q8N6C5 1336 aa15.63■□□□□ 0.09
PRKD1-205ENST00000546371 LOC102724428A0A0B4J2F2 783 aa15.62■□□□□ 0.09
PRKD1-205ENST00000546371 PHF14O94880 888 aa15.62■□□□□ 0.09
PRKD1-205ENST00000546371 SIK1P57059 783 aa15.62■□□□□ 0.09
PRKD1-205ENST00000546371 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.62■□□□□ 0.09
PRKD1-205ENST00000546371 SPG7Q9UQ90 795 aa15.62■□□□□ 0.09
PRKD1-205ENST00000546371 C4BP0C0L5 1744 aa15.61■□□□□ 0.09
PRKD1-205ENST00000546371 CDCA8Q53HL2 280 aa15.61■□□□□ 0.09
PRKD1-205ENST00000546371 LINC00116Q8NCU8 138 aa15.61■□□□□ 0.09
PRKD1-205ENST00000546371 ZNF526Q8TF50 670 aaPredicted RBP15.61■□□□□ 0.09
PRKD1-205ENST00000546371 CARD14Q9BXL6 1004 aa15.61■□□□□ 0.09
PRKD1-205ENST00000546371 EMILIN1Q9Y6C2 1016 aa15.6■□□□□ 0.09
PRKD1-205ENST00000546371 NCAPD2Q15021 1401 aa15.6■□□□□ 0.09
PRKD1-205ENST00000546371 TAF1LQ8IZX4 1826 aa15.59■□□□□ 0.09
PRKD1-205ENST00000546371 KIF3CO14782 793 aa15.58■□□□□ 0.08
PRKD1-205ENST00000546371 ITPK1Q13572 414 aa15.58■□□□□ 0.08
PRKD1-205ENST00000546371 TMOD3Q9NYL9 352 aa15.58■□□□□ 0.08
PRKD1-205ENST00000546371 ASAP1Q9ULH1 1129 aa15.58■□□□□ 0.08
PRKD1-205ENST00000546371 WASHC2AQ641Q2 1341 aa15.58■□□□□ 0.08
PRKD1-205ENST00000546371 GNPATO15228 680 aa15.57■□□□□ 0.08
PRKD1-205ENST00000546371 ATP6V1AP38606 617 aa15.57■□□□□ 0.08
PRKD1-205ENST00000546371 EYA1Q99502 592 aa15.57■□□□□ 0.08
PRKD1-205ENST00000546371 WWC3Q9ULE0 1092 aa15.57■□□□□ 0.08
PRKD1-205ENST00000546371 PPM1GO15355 546 aaPredicted RBP15.56■□□□□ 0.08
PRKD1-205ENST00000546371 TGFB2P61812 414 aa15.56■□□□□ 0.08
PRKD1-205ENST00000546371 IFNL2Q8IZJ0 200 aa15.56■□□□□ 0.08
PRKD1-205ENST00000546371 TOGARAM1Q9Y4F4 1720 aa15.56■□□□□ 0.08
PRKD1-205ENST00000546371 MMP10P09238 476 aa15.55■□□□□ 0.08
PRKD1-205ENST00000546371 PHKG2P15735 406 aa15.55■□□□□ 0.08
PRKD1-205ENST00000546371 ATG3Q9NT62 314 aa15.55■□□□□ 0.08
PRKD1-205ENST00000546371 UBR3Q6ZT12 1888 aa15.54■□□□□ 0.08
PRKD1-205ENST00000546371 PKD1L3Q7Z443 1732 aa15.54■□□□□ 0.08
PRKD1-205ENST00000546371 TRAPPC3LQ5T215 181 aa15.54■□□□□ 0.08
PRKD1-205ENST00000546371 NLGN1Q8N2Q7 840 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms