RNA–Protein interactions for RNA: ENST00000546152.1

PRPF19-207, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 5

Gene PRPF19, Length 814 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-207ENST00000546152 NSD2O96028 1365 aa27.56■■■□□ 2
PRPF19-207ENST00000546152 ZCRB1Q8TBF4 217 aaKnown RBP27.55■■■□□ 2
PRPF19-207ENST00000546152 PROM2Q8N271 834 aa27.54■■■□□ 2
PRPF19-207ENST00000546152 SHANK3Q9BYB0 1731 aa27.53■■■□□ 2
PRPF19-207ENST00000546152 RAPGEF4Q8WZA2 1011 aa27.52■■■□□ 2
PRPF19-207ENST00000546152 KNSTRNQ9Y448 316 aa27.52■■■□□ 2
PRPF19-207ENST00000546152 NCAPD2Q15021 1401 aa27.5■■□□□ 1.99
PRPF19-207ENST00000546152 NBPF14Q5TI25 921 aa27.5■■□□□ 1.99
PRPF19-207ENST00000546152 TATP17735 454 aaPredicted RBP27.49■■□□□ 1.99
PRPF19-207ENST00000546152 AMER1Q5JTC6 1135 aaPredicted RBP27.48■■□□□ 1.99
PRPF19-207ENST00000546152 MORC1Q86VD1 984 aa27.48■■□□□ 1.99
PRPF19-207ENST00000546152 TXNRD1Q16881 649 aa27.47■■□□□ 1.99
PRPF19-207ENST00000546152 EYA1Q99502 592 aa27.47■■□□□ 1.99
PRPF19-207ENST00000546152 PER1O15534 1290 aaPredicted RBP27.46■■□□□ 1.99
PRPF19-207ENST00000546152 BTAF1O14981 1849 aa27.46■■□□□ 1.99
PRPF19-207ENST00000546152 LRP5O75197 1615 aa27.45■■□□□ 1.99
PRPF19-207ENST00000546152 EIF4A2Q14240 407 aaKnown RBP27.45■■□□□ 1.98
PRPF19-207ENST00000546152 ANO8Q9HCE9 1232 aaPredicted RBP27.44■■□□□ 1.98
PRPF19-207ENST00000546152 PRIM1P49642 420 aaKnown RBP27.42■■□□□ 1.98
PRPF19-207ENST00000546152 DOT1LQ8TEK3 1739 aa27.41■■□□□ 1.98
PRPF19-207ENST00000546152 PCDH11XQ9BZA7 1347 aa27.41■■□□□ 1.98
PRPF19-207ENST00000546152 PCDH11YQ9BZA8 1340 aa27.41■■□□□ 1.98
PRPF19-207ENST00000546152 CYP27B1O15528 508 aa27.39■■□□□ 1.98
PRPF19-207ENST00000546152 SYTL4Q96C24 671 aaPredicted RBP27.39■■□□□ 1.98
PRPF19-207ENST00000546152 PKD1L3Q7Z443 1732 aa27.38■■□□□ 1.97
PRPF19-207ENST00000546152 KAT6BQ8WYB5 2073 aa27.37■■□□□ 1.97
PRPF19-207ENST00000546152 IGSF1Q8N6C5 1336 aa27.37■■□□□ 1.97
PRPF19-207ENST00000546152 LRRC4BQ9NT99 713 aa27.34■■□□□ 1.97
PRPF19-207ENST00000546152 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.34■■□□□ 1.97
PRPF19-207ENST00000546152 SPG7Q9UQ90 795 aa27.34■■□□□ 1.97
PRPF19-207ENST00000546152 PAPPAQ13219 1627 aa27.32■■□□□ 1.96
PRPF19-207ENST00000546152 SLC15A2Q16348 729 aa27.32■■□□□ 1.96
PRPF19-207ENST00000546152 CC2D1BQ5T0F9 858 aaKnown RBP27.32■■□□□ 1.96
PRPF19-207ENST00000546152 STK32BQ9NY57 414 aa27.32■■□□□ 1.96
PRPF19-207ENST00000546152 NKX1-1Q15270 411 aaPredicted RBP27.31■■□□□ 1.96
PRPF19-207ENST00000546152 PDGFDQ9GZP0 370 aaPredicted RBP27.31■■□□□ 1.96
PRPF19-207ENST00000546152 NPC1L1Q9UHC9 1359 aa27.31■■□□□ 1.96
PRPF19-207ENST00000546152 CASZ1Q86V15 1759 aa27.3■■□□□ 1.96
PRPF19-207ENST00000546152 SLC27A3Q5K4L6 730 aa27.29■■□□□ 1.96
PRPF19-207ENST00000546152 PLEKHG2Q9H7P9 1386 aa27.29■■□□□ 1.96
PRPF19-207ENST00000546152 TOGARAM1Q9Y4F4 1720 aa27.29■■□□□ 1.96
PRPF19-207ENST00000546152 MTHFSP49914 203 aa27.28■■□□□ 1.96
PRPF19-207ENST00000546152 IL13P35225 146 aa27.27■■□□□ 1.96
PRPF19-207ENST00000546152 LY75O60449 1722 aa27.27■■□□□ 1.96
PRPF19-207ENST00000546152 PHKG2P15735 406 aa27.25■■□□□ 1.95
PRPF19-207ENST00000546152 KCNQ4P56696 695 aa27.25■■□□□ 1.95
PRPF19-207ENST00000546152 ZNF827Q17R98 1081 aa27.25■■□□□ 1.95
PRPF19-207ENST00000546152 AEBP1Q8IUX7 1158 aa27.25■■□□□ 1.95
PRPF19-207ENST00000546152 MPRIPQ6WCQ1 1025 aa27.24■■□□□ 1.95
PRPF19-207ENST00000546152 IFNL2Q8IZJ0 200 aa27.24■■□□□ 1.95
PRPF19-207ENST00000546152 SPON1Q9HCB6 807 aa27.24■■□□□ 1.95
PRPF19-207ENST00000546152 AKT1S1Q96B36 256 aa27.23■■□□□ 1.95
PRPF19-207ENST00000546152 KDRP35968 1356 aa27.22■■□□□ 1.95
PRPF19-207ENST00000546152 ITGB4P16144 1822 aa27.21■■□□□ 1.95
PRPF19-207ENST00000546152 CNGB1Q14028 1251 aaPredicted RBP27.21■■□□□ 1.95
PRPF19-207ENST00000546152 SULT6B1Q6IMI4 303 aa27.21■■□□□ 1.95
PRPF19-207ENST00000546152 PIGBQ92521 554 aa27.2■■□□□ 1.94
PRPF19-207ENST00000546152 CCNL1Q9UK58 526 aaPredicted RBP27.2■■□□□ 1.94
PRPF19-207ENST00000546152 ZBTB7AO95365 584 aa27.19■■□□□ 1.94
PRPF19-207ENST00000546152 PLEKHO1Q53GL0 409 aaPredicted RBP27.19■■□□□ 1.94
PRPF19-207ENST00000546152 PALLDQ8WX93 1383 aa27.18■■□□□ 1.94
PRPF19-207ENST00000546152 AMOTQ4VCS5 1084 aa27.17■■□□□ 1.94
PRPF19-207ENST00000546152 ZNF530Q6P9A1 599 aaPredicted RBP27.15■■□□□ 1.94
PRPF19-207ENST00000546152 SMARCC1Q92922 1105 aaPredicted RBP27.15■■□□□ 1.94
PRPF19-207ENST00000546152 DIAPH1O60610 1272 aaKnown RBP27.14■■□□□ 1.94
PRPF19-207ENST00000546152 PTGER2P43116 358 aa27.14■■□□□ 1.94
PRPF19-207ENST00000546152 TMOD3Q9NYL9 352 aa27.14■■□□□ 1.94
PRPF19-207ENST00000546152 ATF5Q9Y2D1 282 aaPredicted RBP27.14■■□□□ 1.94
PRPF19-207ENST00000546152 COL3A1P02461 1466 aaPredicted RBP27.13■■□□□ 1.93
PRPF19-207ENST00000546152 DCAF5Q96JK2 942 aa27.13■■□□□ 1.93
PRPF19-207ENST00000546152 MTFR1LQ9H019 292 aa27.13■■□□□ 1.93
PRPF19-207ENST00000546152 QSER1Q2KHR3 1735 aa27.13■■□□□ 1.93
PRPF19-207ENST00000546152 HSP90AB1P08238 724 aaKnown RBP27.12■■□□□ 1.93
PRPF19-207ENST00000546152 PNPLA7Q6ZV29 1317 aa27.12■■□□□ 1.93
PRPF19-207ENST00000546152 KDM6AO15550 1401 aaPredicted RBP27.11■■□□□ 1.93
PRPF19-207ENST00000546152 HMOX1P09601 288 aa27.11■■□□□ 1.93
PRPF19-207ENST00000546152 TFCP2L1Q9NZI6 479 aa27.11■■□□□ 1.93
PRPF19-207ENST00000546152 PPP1R1BQ9UD71 204 aaPredicted RBP27.11■■□□□ 1.93
PRPF19-207ENST00000546152 ASAP1Q9ULH1 1129 aa27.11■■□□□ 1.93
PRPF19-207ENST00000546152 ERVV-2B6SEH9 535 aa27.1■■□□□ 1.93
PRPF19-207ENST00000546152 TUBGCP6Q96RT7 1819 aa27.1■■□□□ 1.93
PRPF19-207ENST00000546152 C5P01031 1676 aa27.09■■□□□ 1.93
PRPF19-207ENST00000546152 SGIP1Q9BQI5 828 aa27.09■■□□□ 1.93
PRPF19-207ENST00000546152 C1orf141Q5JVX7 400 aa27.08■■□□□ 1.93
PRPF19-207ENST00000546152 ATG3Q9NT62 314 aa27.07■■□□□ 1.92
PRPF19-207ENST00000546152 TAF1LQ8IZX4 1826 aa27.06■■□□□ 1.92
PRPF19-207ENST00000546152 LOC102724428A0A0B4J2F2 783 aa27.05■■□□□ 1.92
PRPF19-207ENST00000546152 SIK1P57059 783 aa27.05■■□□□ 1.92
PRPF19-207ENST00000546152 SLC16A10Q8TF71 515 aa27.05■■□□□ 1.92
PRPF19-207ENST00000546152 HMGB2P26583 209 aaKnown RBP27.04■■□□□ 1.92
PRPF19-207ENST00000546152 PPP2R1AP30153 589 aa27.03■■□□□ 1.92
PRPF19-207ENST00000546152 CABP4P57796 275 aa27.03■■□□□ 1.92
PRPF19-207ENST00000546152 C4BP0C0L5 1744 aa27.02■■□□□ 1.92
PRPF19-207ENST00000546152 AKAP4Q5JQC9 854 aa27.02■■□□□ 1.92
PRPF19-207ENST00000546152 COL23A1Q86Y22 540 aaPredicted RBP27.02■■□□□ 1.92
PRPF19-207ENST00000546152 U2SURPO15042 1029 aaKnown RBP27.01■■□□□ 1.91
PRPF19-207ENST00000546152 ITPK1Q13572 414 aa27■■□□□ 1.91
PRPF19-207ENST00000546152 MTHFSDQ2M296 383 aaKnown RBP27■■□□□ 1.91
PRPF19-207ENST00000546152 LINC00116Q8NCU8 138 aa27■■□□□ 1.91
PRPF19-207ENST00000546152 NFATC2IPQ8NCF5 419 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms