RNA–Protein interactions for RNA: ENST00000546079.5

CLPTM1-203, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-203ENST00000546079 ZNF428Q96B54 188 aa20.25■□□□□ 0.83
CLPTM1-203ENST00000546079 PRAM1Q96QH2 718 aa20.25■□□□□ 0.83
CLPTM1-203ENST00000546079 NRXN3Q9Y4C0 1643 aa20.24■□□□□ 0.83
CLPTM1-203ENST00000546079 ST18O60284 1047 aa20.23■□□□□ 0.83
CLPTM1-203ENST00000546079 GSPT1P15170 499 aaKnown RBP20.23■□□□□ 0.83
CLPTM1-203ENST00000546079 PIBF1Q8WXW3 757 aa20.23■□□□□ 0.83
CLPTM1-203ENST00000546079 LETM1O95202 739 aaPredicted RBP20.22■□□□□ 0.83
CLPTM1-203ENST00000546079 DNTTIP2Q5QJE6 756 aaKnown RBP20.22■□□□□ 0.83
CLPTM1-203ENST00000546079 DLC1Q96QB1 1528 aa20.22■□□□□ 0.83
CLPTM1-203ENST00000546079 ZGPATQ8N5A5 531 aaKnown RBP20.22■□□□□ 0.83
CLPTM1-203ENST00000546079 NSFL1CQ9UNZ2 370 aaKnown RBP20.22■□□□□ 0.83
CLPTM1-203ENST00000546079 SIRT2Q8IXJ6 389 aa20.21■□□□□ 0.83
CLPTM1-203ENST00000546079 RNF214Q8ND24 703 aa20.21■□□□□ 0.83
CLPTM1-203ENST00000546079 TSPY26PQ9H489 355 aa20.21■□□□□ 0.83
CLPTM1-203ENST00000546079 PIK3R4Q99570 1358 aa20.21■□□□□ 0.83
CLPTM1-203ENST00000546079 ARHGAP45Q92619 1136 aa20.21■□□□□ 0.83
CLPTM1-203ENST00000546079 MINK1Q8N4C8 1332 aaPredicted RBP20.21■□□□□ 0.83
CLPTM1-203ENST00000546079 A0A1W2PP64 1363 aa20.2■□□□□ 0.82
CLPTM1-203ENST00000546079 NOLC1Q14978 699 aaKnown RBP eCLIP20.2■□□□□ 0.82
CLPTM1-203ENST00000546079 ATAD2Q6PL18 1390 aa20.19■□□□□ 0.82
CLPTM1-203ENST00000546079 SRPK2P78362 688 aaKnown RBP20.19■□□□□ 0.82
CLPTM1-203ENST00000546079 CBX1P83916 185 aa20.19■□□□□ 0.82
CLPTM1-203ENST00000546079 PLEKHM2Q8IWE5 1019 aa20.19■□□□□ 0.82
CLPTM1-203ENST00000546079 CD163L1Q9NR16 1453 aa20.19■□□□□ 0.82
CLPTM1-203ENST00000546079 KIF3AQ9Y496 699 aa20.19■□□□□ 0.82
CLPTM1-203ENST00000546079 PPP4R3BQ5MIZ7 849 aa20.18■□□□□ 0.82
CLPTM1-203ENST00000546079 INTS3Q68E01 1043 aaKnown RBP20.18■□□□□ 0.82
CLPTM1-203ENST00000546079 ESF1Q9H501 851 aaKnown RBP20.18■□□□□ 0.82
CLPTM1-203ENST00000546079 SYAP1Q96A49 352 aaPredicted RBP20.18■□□□□ 0.82
CLPTM1-203ENST00000546079 UVSSAQ2YD98 709 aa20.17■□□□□ 0.82
CLPTM1-203ENST00000546079 TTC22Q5TAA0 569 aa20.17■□□□□ 0.82
CLPTM1-203ENST00000546079 C1orf115Q9H7X2 142 aa20.17■□□□□ 0.82
CLPTM1-203ENST00000546079 FAM184AQ8NB25 1140 aa20.16■□□□□ 0.82
CLPTM1-203ENST00000546079 JARID2Q92833 1246 aaPredicted RBP20.16■□□□□ 0.82
CLPTM1-203ENST00000546079 SPTLC3Q9NUV7 552 aa20.16■□□□□ 0.82
CLPTM1-203ENST00000546079 U2SURPO15042 1029 aaKnown RBP20.16■□□□□ 0.82
CLPTM1-203ENST00000546079 ATP2B3Q16720 1220 aa20.16■□□□□ 0.82
CLPTM1-203ENST00000546079 TSC1Q92574 1164 aa20.16■□□□□ 0.82
CLPTM1-203ENST00000546079 TNRQ92752 1358 aa20.16■□□□□ 0.82
CLPTM1-203ENST00000546079 UBR1Q8IWV7 1749 aa20.15■□□□□ 0.82
CLPTM1-203ENST00000546079 PTCH1Q13635 1447 aa20.15■□□□□ 0.82
CLPTM1-203ENST00000546079 FKBP5Q13451 457 aaPredicted RBP20.15■□□□□ 0.82
CLPTM1-203ENST00000546079 PHF14O94880 888 aa20.14■□□□□ 0.82
CLPTM1-203ENST00000546079 ANKRD26Q9UPS8 1709 aa20.14■□□□□ 0.81
CLPTM1-203ENST00000546079 CHAMP1Q96JM3 812 aa20.14■□□□□ 0.81
CLPTM1-203ENST00000546079 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.13■□□□□ 0.81
CLPTM1-203ENST00000546079 BRD1O95696 1058 aa20.13■□□□□ 0.81
CLPTM1-203ENST00000546079 CDK19Q9BWU1 502 aa20.13■□□□□ 0.81
CLPTM1-203ENST00000546079 MRPL50Q8N5N7 158 aaKnown RBP20.12■□□□□ 0.81
CLPTM1-203ENST00000546079 METP08581 1390 aa20.12■□□□□ 0.81
CLPTM1-203ENST00000546079 ABCC4O15439 1325 aa20.12■□□□□ 0.81
CLPTM1-203ENST00000546079 CASC1Q6TDU7 716 aa20.11■□□□□ 0.81
CLPTM1-203ENST00000546079 DCTPP1Q9H773 170 aa20.11■□□□□ 0.81
CLPTM1-203ENST00000546079 BCL2L12Q9HB09 334 aa20.11■□□□□ 0.81
CLPTM1-203ENST00000546079 COL3A1P02461 1466 aaPredicted RBP20.11■□□□□ 0.81
CLPTM1-203ENST00000546079 WAPLQ7Z5K2 1190 aa20.11■□□□□ 0.81
CLPTM1-203ENST00000546079 KNDC1Q76NI1 1749 aa20.11■□□□□ 0.81
CLPTM1-203ENST00000546079 REC8O95072 547 aa20.1■□□□□ 0.81
CLPTM1-203ENST00000546079 TAF3Q5VWG9 929 aa20.1■□□□□ 0.81
CLPTM1-203ENST00000546079 PDCL2Q8N4E4 241 aa20.1■□□□□ 0.81
CLPTM1-203ENST00000546079 TERF2IPQ9NYB0 399 aa20.1■□□□□ 0.81
CLPTM1-203ENST00000546079 VAMP4O75379 141 aa20.09■□□□□ 0.81
CLPTM1-203ENST00000546079 ZNF830Q96NB3 372 aaPredicted RBP20.09■□□□□ 0.81
CLPTM1-203ENST00000546079 TMEM2Q9UHN6 1383 aa20.09■□□□□ 0.81
CLPTM1-203ENST00000546079 MCM2P49736 904 aa20.08■□□□□ 0.8
CLPTM1-203ENST00000546079 DIAPH3Q9NSV4 1193 aa20.08■□□□□ 0.8
CLPTM1-203ENST00000546079 TECPR2O15040 1411 aa20.07■□□□□ 0.8
CLPTM1-203ENST00000546079 ANKRD7Q92527 254 aa20.07■□□□□ 0.8
CLPTM1-203ENST00000546079 TMX3Q96JJ7 454 aa20.07■□□□□ 0.8
CLPTM1-203ENST00000546079 TTC12Q9H892 705 aaPredicted RBP20.07■□□□□ 0.8
CLPTM1-203ENST00000546079 KIF20BQ96Q89 1820 aa20.07■□□□□ 0.8
CLPTM1-203ENST00000546079 ZBTB7CA1YPR0 619 aa20.07■□□□□ 0.8
CLPTM1-203ENST00000546079 FYB1O15117 783 aa20.07■□□□□ 0.8
CLPTM1-203ENST00000546079 SDSP20132 328 aa20.07■□□□□ 0.8
CLPTM1-203ENST00000546079 CUL4AQ13619 759 aa20.06■□□□□ 0.8
CLPTM1-203ENST00000546079 GGNBP2Q9H3C7 697 aa20.06■□□□□ 0.8
CLPTM1-203ENST00000546079 CABP1Q9NZU7 370 aa20.06■□□□□ 0.8
CLPTM1-203ENST00000546079 USP25Q9UHP3 1055 aa20.06■□□□□ 0.8
CLPTM1-203ENST00000546079 KIF24Q5T7B8 1368 aa20.06■□□□□ 0.8
CLPTM1-203ENST00000546079 ADCY5O95622 1261 aa20.05■□□□□ 0.8
CLPTM1-203ENST00000546079 FOXD4L5Q5VV16 416 aaPredicted RBP20.05■□□□□ 0.8
CLPTM1-203ENST00000546079 FOXD4L4Q8WXT5 416 aaPredicted RBP20.05■□□□□ 0.8
CLPTM1-203ENST00000546079 FEZ1Q99689 392 aa20.05■□□□□ 0.8
CLPTM1-203ENST00000546079 CPS1P31327 1500 aa20.05■□□□□ 0.8
CLPTM1-203ENST00000546079 BBXQ8WY36 941 aaPredicted RBP20.05■□□□□ 0.8
CLPTM1-203ENST00000546079 INTS4Q96HW7 963 aaKnown RBP20.05■□□□□ 0.8
CLPTM1-203ENST00000546079 ATP7BP35670 1465 aa20.05■□□□□ 0.8
CLPTM1-203ENST00000546079 C16orf71Q8IYS4 520 aaPredicted RBP20.04■□□□□ 0.8
CLPTM1-203ENST00000546079 FAM135BQ49AJ0 1406 aa20.04■□□□□ 0.8
CLPTM1-203ENST00000546079 FAM177BA6PVY3 158 aa20.04■□□□□ 0.8
CLPTM1-203ENST00000546079 ERC2O15083 957 aa20.04■□□□□ 0.8
CLPTM1-203ENST00000546079 HDGFP51858 240 aaKnown RBP20.04■□□□□ 0.8
CLPTM1-203ENST00000546079 SPDYE4A6NLX3 237 aa20.03■□□□□ 0.8
CLPTM1-203ENST00000546079 CTIFO43310 598 aaKnown RBP20.03■□□□□ 0.8
CLPTM1-203ENST00000546079 HDGFL2Q7Z4V5 671 aaPredicted RBP20.03■□□□□ 0.8
CLPTM1-203ENST00000546079 C17orf53Q8N3J3 647 aaPredicted RBP20.03■□□□□ 0.8
CLPTM1-203ENST00000546079 C3P01024 1663 aa20.03■□□□□ 0.8
CLPTM1-203ENST00000546079 GTF2E1P29083 439 aaPredicted RBP20.03■□□□□ 0.8
CLPTM1-203ENST00000546079 CHAF1AQ13111 956 aaPredicted RBP20.03■□□□□ 0.8
CLPTM1-203ENST00000546079 MPNDQ8N594 471 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms