RNA–Protein interactions for RNA: ENST00000546026.1

CIT-218, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 3

Gene CIT, Length 677 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-218ENST00000546026 NLRP2Q9NX02 1062 aa13.16□□□□□ -0.3
CIT-218ENST00000546026 MAP3K5Q99683 1374 aa13.16□□□□□ -0.3
CIT-218ENST00000546026 CRB1P82279 1406 aa13.15□□□□□ -0.3
CIT-218ENST00000546026 CHL1O00533 1208 aa13.15□□□□□ -0.3
CIT-218ENST00000546026 RARSP54136 660 aaKnown RBP13.15□□□□□ -0.3
CIT-218ENST00000546026 DCTN1Q14203 1278 aa13.15□□□□□ -0.3
CIT-218ENST00000546026 ZNF428Q96B54 188 aa13.15□□□□□ -0.3
CIT-218ENST00000546026 LAS1LQ9Y4W2 734 aaKnown RBP13.15□□□□□ -0.3
CIT-218ENST00000546026 PHLPP1O60346 1717 aa13.15□□□□□ -0.3
CIT-218ENST00000546026 UBAP1LF5GYI3 381 aa13.14□□□□□ -0.31
CIT-218ENST00000546026 AKAP4Q5JQC9 854 aa13.14□□□□□ -0.31
CIT-218ENST00000546026 MCM10Q7L590 875 aa13.14□□□□□ -0.31
CIT-218ENST00000546026 RAPGEF4Q8WZA2 1011 aa13.14□□□□□ -0.31
CIT-218ENST00000546026 MBIPQ9NS73 344 aa13.14□□□□□ -0.31
CIT-218ENST00000546026 BABAM1Q9NWV8 329 aa13.14□□□□□ -0.31
CIT-218ENST00000546026 PPP4R2Q9NY27 417 aa13.14□□□□□ -0.31
CIT-218ENST00000546026 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.14□□□□□ -0.31
CIT-218ENST00000546026 WDR17Q8IZU2 1322 aa13.13□□□□□ -0.31
CIT-218ENST00000546026 COL16A1Q07092 1604 aaPredicted RBP13.13□□□□□ -0.31
CIT-218ENST00000546026 TATP17735 454 aaPredicted RBP13.13□□□□□ -0.31
CIT-218ENST00000546026 CERKQ8TCT0 537 aa13.13□□□□□ -0.31
CIT-218ENST00000546026 BCAR3O75815 825 aa13.12□□□□□ -0.31
CIT-218ENST00000546026 PIP4K2BP78356 416 aa13.12□□□□□ -0.31
CIT-218ENST00000546026 ALDH1L2Q3SY69 923 aa13.12□□□□□ -0.31
CIT-218ENST00000546026 ZNF530Q6P9A1 599 aaPredicted RBP13.12□□□□□ -0.31
CIT-218ENST00000546026 IL17REQ8NFR9 667 aa13.12□□□□□ -0.31
CIT-218ENST00000546026 COL5A2P05997 1499 aaPredicted RBP13.11□□□□□ -0.31
CIT-218ENST00000546026 LRRC37A3O60309 1634 aa13.11□□□□□ -0.31
CIT-218ENST00000546026 PLIN1O60240 522 aa13.11□□□□□ -0.31
CIT-218ENST00000546026 C1orf141Q5JVX7 400 aa13.11□□□□□ -0.31
CIT-218ENST00000546026 CARD10Q9BWT7 1032 aa13.11□□□□□ -0.31
CIT-218ENST00000546026 SPG7Q9UQ90 795 aa13.11□□□□□ -0.31
CIT-218ENST00000546026 COL14A1Q05707 1796 aaKnown RBP13.11□□□□□ -0.31
CIT-218ENST00000546026 CEMIPQ8WUJ3 1361 aa13.1□□□□□ -0.31
CIT-218ENST00000546026 VAMP4O75379 141 aa13.1□□□□□ -0.31
CIT-218ENST00000546026 BRPF1P55201 1214 aaPredicted RBP13.1□□□□□ -0.31
CIT-218ENST00000546026 EVA1CP58658 441 aa13.1□□□□□ -0.31
CIT-218ENST00000546026 PDE3AQ14432 1141 aa13.1□□□□□ -0.31
CIT-218ENST00000546026 TAF7Q15545 349 aaPredicted RBP13.1□□□□□ -0.31
CIT-218ENST00000546026 TOM1L2Q6ZVM7 507 aa13.1□□□□□ -0.31
CIT-218ENST00000546026 OVOS2A0A0G2JMS6 1433 aa13.1□□□□□ -0.31
CIT-218ENST00000546026 RNMTO43148 476 aaKnown RBP13.08□□□□□ -0.32
CIT-218ENST00000546026 MS4A1P11836 297 aa13.08□□□□□ -0.32
CIT-218ENST00000546026 TWISTNBQ3B726 338 aaPredicted RBP13.08□□□□□ -0.32
CIT-218ENST00000546026 TSPYL4Q9UJ04 414 aa13.08□□□□□ -0.32
CIT-218ENST00000546026 SOS1Q07889 1333 aaPredicted RBP13.08□□□□□ -0.32
CIT-218ENST00000546026 CANXP27824 592 aaKnown RBP13.07□□□□□ -0.32
CIT-218ENST00000546026 IFNL2Q8IZJ0 200 aa13.07□□□□□ -0.32
CIT-218ENST00000546026 TSPYL6Q8N831 410 aa13.07□□□□□ -0.32
CIT-218ENST00000546026 C8orf58Q8NAV2 365 aa13.07□□□□□ -0.32
CIT-218ENST00000546026 EXOC6Q8TAG9 804 aa13.07□□□□□ -0.32
CIT-218ENST00000546026 SSH1Q8WYL5 1049 aa13.07□□□□□ -0.32
CIT-218ENST00000546026 LGR6Q9HBX8 967 aa13.07□□□□□ -0.32
CIT-218ENST00000546026 SMC4Q9NTJ3 1288 aa13.07□□□□□ -0.32
CIT-218ENST00000546026 BTG4Q9NY30 223 aa13.07□□□□□ -0.32
CIT-218ENST00000546026 MEGF6O75095 1541 aa13.07□□□□□ -0.32
CIT-218ENST00000546026 ADAMTS7Q9UKP4 1686 aa13.06□□□□□ -0.32
CIT-218ENST00000546026 PKD1L3Q7Z443 1732 aa13.06□□□□□ -0.32
CIT-218ENST00000546026 IPO8O15397 1037 aaKnown RBP13.06□□□□□ -0.32
CIT-218ENST00000546026 HSP90AB1P08238 724 aaKnown RBP13.06□□□□□ -0.32
CIT-218ENST00000546026 ZKSCAN2Q63HK3 967 aa13.06□□□□□ -0.32
CIT-218ENST00000546026 LARP1Q6PKG0 1096 aaKnown RBP13.06□□□□□ -0.32
CIT-218ENST00000546026 CRBNQ96SW2 442 aa13.06□□□□□ -0.32
CIT-218ENST00000546026 STRN4Q9NRL3 753 aa13.06□□□□□ -0.32
CIT-218ENST00000546026 PARP4Q9UKK3 1724 aaKnown RBP13.05□□□□□ -0.32
CIT-218ENST00000546026 IL2RBP14784 551 aa13.05□□□□□ -0.32
CIT-218ENST00000546026 PHKG2P15735 406 aa13.05□□□□□ -0.32
CIT-218ENST00000546026 TEFQ10587 303 aa13.05□□□□□ -0.32
CIT-218ENST00000546026 C20orf194Q5TEA3 1177 aa13.05□□□□□ -0.32
CIT-218ENST00000546026 MPRIPQ6WCQ1 1025 aa13.05□□□□□ -0.32
CIT-218ENST00000546026 FRAT1Q92837 279 aaPredicted RBP13.05□□□□□ -0.32
CIT-218ENST00000546026 KIF16BQ96L93 1317 aa13.05□□□□□ -0.32
CIT-218ENST00000546026 JCADQ9P266 1359 aa13.05□□□□□ -0.32
CIT-218ENST00000546026 AAMPQ13685 434 aa13.04□□□□□ -0.32
CIT-218ENST00000546026 MRPL50Q8N5N7 158 aaKnown RBP13.04□□□□□ -0.32
CIT-218ENST00000546026 ZCRB1Q8TBF4 217 aaKnown RBP13.04□□□□□ -0.32
CIT-218ENST00000546026 ARHGAP45Q92619 1136 aa13.04□□□□□ -0.32
CIT-218ENST00000546026 MIS18AQ9NYP9 233 aa13.04□□□□□ -0.32
CIT-218ENST00000546026 ELL2O00472 640 aaPredicted RBP13.03□□□□□ -0.32
CIT-218ENST00000546026 DCAF5Q96JK2 942 aa13.03□□□□□ -0.32
CIT-218ENST00000546026 BCL2L13Q9BXK5 485 aa13.03□□□□□ -0.32
CIT-218ENST00000546026 CHMP4AQ9BY43 222 aa13.03□□□□□ -0.32
CIT-218ENST00000546026 NOB1Q9ULX3 412 aaKnown RBP13.03□□□□□ -0.32
CIT-218ENST00000546026 CYP27B1O15528 508 aa13.02□□□□□ -0.33
CIT-218ENST00000546026 ATF7IPQ6VMQ6 1270 aa13.02□□□□□ -0.33
CIT-218ENST00000546026 VIRMAQ69YN4 1812 aaKnown RBP13.02□□□□□ -0.33
CIT-218ENST00000546026 BTBD11A6QL63 1104 aa13.01□□□□□ -0.33
CIT-218ENST00000546026 ADAMTS2O95450 1211 aa13.01□□□□□ -0.33
CIT-218ENST00000546026 NKX1-1Q15270 411 aaPredicted RBP13.01□□□□□ -0.33
CIT-218ENST00000546026 DZIP1LQ8IYY4 767 aaKnown RBP13.01□□□□□ -0.33
CIT-218ENST00000546026 CCDC136Q96JN2 1154 aa13.01□□□□□ -0.33
CIT-218ENST00000546026 PCDH11XQ9BZA7 1347 aa13.01□□□□□ -0.33
CIT-218ENST00000546026 PCDH11YQ9BZA8 1340 aa13.01□□□□□ -0.33
CIT-218ENST00000546026 KDM3BQ7LBC6 1761 aa13.01□□□□□ -0.33
CIT-218ENST00000546026 SCN11AQ9UI33 1791 aa13.01□□□□□ -0.33
CIT-218ENST00000546026 PLCH1Q4KWH8 1693 aa13□□□□□ -0.33
CIT-218ENST00000546026 SPATA31A6Q5VVP1 1343 aa13□□□□□ -0.33
CIT-218ENST00000546026 NUTM2BA6NNL0 878 aaPredicted RBP13□□□□□ -0.33
CIT-218ENST00000546026 NUTM2EB1AL46 878 aaPredicted RBP13□□□□□ -0.33
CIT-218ENST00000546026 HOXB7P09629 217 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms