RNA–Protein interactions for RNA: ENST00000545720.6

RAP1B-233, Transcript of RAP1B, member of RAS oncogene family, human

TSL 5

Gene RAP1B, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-233	ENST00000545720	ZNF827	Q17R98	1081 aa		33.16	■■■□□ 2.9
RAP1B-233	ENST00000545720	ZCRB1	Q8TBF4	217 aa	Known RBP	33.16	■■■□□ 2.9
RAP1B-233	ENST00000545720	NBPF6	Q5VWK0	638 aa		33.15	■■■□□ 2.9
RAP1B-233	ENST00000545720	NBPF4	Q96M43	638 aa		33.15	■■■□□ 2.9
RAP1B-233	ENST00000545720	YY1	P25490	414 aa		33.14	■■■□□ 2.9
RAP1B-233	ENST00000545720	USHBP1	Q8N6Y0	703 aa		33.14	■■■□□ 2.9
RAP1B-233	ENST00000545720	PRIM1	P49642	420 aa	Known RBP	33.13	■■■□□ 2.89
RAP1B-233	ENST00000545720	NSD3	Q9BZ95	1437 aa		33.11	■■■□□ 2.89
RAP1B-233	ENST00000545720	NSD2	O96028	1365 aa		33.11	■■■□□ 2.89
RAP1B-233	ENST00000545720	FLT4	P35916	1363 aa		33.1	■■■□□ 2.89
RAP1B-233	ENST00000545720	SLC27A3	Q5K4L6	730 aa		33.1	■■■□□ 2.89
RAP1B-233	ENST00000545720	INSR	P06213	1382 aa		33.09	■■■□□ 2.89
RAP1B-233	ENST00000545720	MAP2	P11137	1827 aa	Known RBP	33.09	■■■□□ 2.89
RAP1B-233	ENST00000545720	HSP90AB2P	Q58FF8	381 aa		33.09	■■■□□ 2.89
RAP1B-233	ENST00000545720	SGIP1	Q9BQI5	828 aa		33.09	■■■□□ 2.89
RAP1B-233	ENST00000545720	CARD14	Q9BXL6	1004 aa		33.09	■■■□□ 2.89
RAP1B-233	ENST00000545720	ANKRD26	Q9UPS8	1709 aa		33.08	■■■□□ 2.89
RAP1B-233	ENST00000545720	RAPGEF4	Q8WZA2	1011 aa		33.08	■■■□□ 2.89
RAP1B-233	ENST00000545720	FHDC1	Q9C0D6	1143 aa	Predicted RBP	33.08	■■■□□ 2.89
RAP1B-233	ENST00000545720	KCNQ4	P56696	695 aa		33.07	■■■□□ 2.88
RAP1B-233	ENST00000545720	TIMELESS	Q9UNS1	1208 aa		33.07	■■■□□ 2.88
RAP1B-233	ENST00000545720	CGNL1	Q0VF96	1302 aa		33.06	■■■□□ 2.88
RAP1B-233	ENST00000545720	AKT1S1	Q96B36	256 aa		33.06	■■■□□ 2.88
RAP1B-233	ENST00000545720	PCGF6	Q9BYE7	350 aa		33.06	■■■□□ 2.88
RAP1B-233	ENST00000545720	KIF24	Q5T7B8	1368 aa		33.06	■■■□□ 2.88
RAP1B-233	ENST00000545720	SYT17	Q9BSW7	474 aa		33.04	■■■□□ 2.88
RAP1B-233	ENST00000545720	COL24A1	Q17RW2	1714 aa		33.04	■■■□□ 2.88
RAP1B-233	ENST00000545720	TAT	P17735	454 aa	Predicted RBP	33.03	■■■□□ 2.88
RAP1B-233	ENST00000545720	PKD1L3	Q7Z443	1732 aa		33.02	■■■□□ 2.88
RAP1B-233	ENST00000545720	ITGB4	P16144	1822 aa		33.02	■■■□□ 2.88
RAP1B-233	ENST00000545720	EMILIN1	Q9Y6C2	1016 aa		33.02	■■■□□ 2.88
RAP1B-233	ENST00000545720	CLSPN	Q9HAW4	1339 aa		33.02	■■■□□ 2.88
RAP1B-233	ENST00000545720	CHD4	Q14839	1912 aa		33.01	■■■□□ 2.88
RAP1B-233	ENST00000545720	ARX	Q96QS3	562 aa		33.01	■■■□□ 2.87
RAP1B-233	ENST00000545720	TOGARAM1	Q9Y4F4	1720 aa		33	■■■□□ 2.87
RAP1B-233	ENST00000545720	PNPLA7	Q6ZV29	1317 aa		33	■■■□□ 2.87
RAP1B-233	ENST00000545720	C5	P01031	1676 aa		32.99	■■■□□ 2.87
RAP1B-233	ENST00000545720	PCDH11X	Q9BZA7	1347 aa		32.99	■■■□□ 2.87
RAP1B-233	ENST00000545720	PCDH11Y	Q9BZA8	1340 aa		32.99	■■■□□ 2.87
RAP1B-233	ENST00000545720	TFCP2L1	Q9NZI6	479 aa		32.98	■■■□□ 2.87
RAP1B-233	ENST00000545720	CCNL1	Q9UK58	526 aa	Predicted RBP	32.98	■■■□□ 2.87
RAP1B-233	ENST00000545720	TAF1L	Q8IZX4	1826 aa		32.98	■■■□□ 2.87
RAP1B-233	ENST00000545720	PPM1G	O15355	546 aa	Predicted RBP	32.96	■■■□□ 2.87
RAP1B-233	ENST00000545720	SLC16A10	Q8TF71	515 aa		32.95	■■■□□ 2.87
RAP1B-233	ENST00000545720	POLR3GL	Q9BT43	218 aa		32.95	■■■□□ 2.87
RAP1B-233	ENST00000545720	MAP3K5	Q99683	1374 aa		32.93	■■■□□ 2.86
RAP1B-233	ENST00000545720	UTRN	P46939	3433 aa		32.92	■■■□□ 2.86
RAP1B-233	ENST00000545720	NCAPD2	Q15021	1401 aa		32.91	■■■□□ 2.86
RAP1B-233	ENST00000545720	CYP27B1	O15528	508 aa		32.89	■■■□□ 2.86
RAP1B-233	ENST00000545720	POLD1	P28340	1107 aa		32.89	■■■□□ 2.86
RAP1B-233	ENST00000545720	KLHL34	Q8N239	644 aa		32.89	■■■□□ 2.86
RAP1B-233	ENST00000545720	MPRIP	Q6WCQ1	1025 aa		32.87	■■■□□ 2.85
RAP1B-233	ENST00000545720	WASHC2A	Q641Q2	1341 aa		32.86	■■■□□ 2.85
RAP1B-233	ENST00000545720	PALLD	Q8WX93	1383 aa		32.85	■■■□□ 2.85
RAP1B-233	ENST00000545720	MSH5	O43196	834 aa		32.84	■■■□□ 2.85
RAP1B-233	ENST00000545720	C4B	P0C0L5	1744 aa		32.82	■■■□□ 2.85
RAP1B-233	ENST00000545720	POLK	Q9UBT6	870 aa		32.82	■■■□□ 2.84
RAP1B-233	ENST00000545720	TNNT2	P45379	298 aa	Predicted RBP	32.81	■■■□□ 2.84
RAP1B-233	ENST00000545720	COL23A1	Q86Y22	540 aa	Predicted RBP	32.81	■■■□□ 2.84
RAP1B-233	ENST00000545720	EYA1	Q99502	592 aa		32.81	■■■□□ 2.84
RAP1B-233	ENST00000545720	EIF4G2	P78344	907 aa	Known RBP eCLIP	32.8	■■■□□ 2.84
RAP1B-233	ENST00000545720	SPG7	Q9UQ90	795 aa		32.8	■■■□□ 2.84
RAP1B-233	ENST00000545720	HSPA5	P11021	654 aa	Known RBP	32.79	■■■□□ 2.84
RAP1B-233	ENST00000545720	UBR3	Q6ZT12	1888 aa		32.79	■■■□□ 2.84
RAP1B-233	ENST00000545720	GPR162	Q16538	588 aa		32.76	■■■□□ 2.83
RAP1B-233	ENST00000545720	NKX1-1	Q15270	411 aa	Predicted RBP	32.75	■■■□□ 2.83
RAP1B-233	ENST00000545720	MSL1	Q68DK7	614 aa		32.75	■■■□□ 2.83
RAP1B-233	ENST00000545720	SMARCC1	Q92922	1105 aa	Predicted RBP	32.75	■■■□□ 2.83
RAP1B-233	ENST00000545720	GOLGB1	Q14789	3259 aa	Known RBP	32.75	■■■□□ 2.83
RAP1B-233	ENST00000545720	PIGB	Q92521	554 aa		32.74	■■■□□ 2.83
RAP1B-233	ENST00000545720	EIF4A2	Q14240	407 aa	Known RBP	32.73	■■■□□ 2.83
RAP1B-233	ENST00000545720	ZNF784	Q8NCA9	323 aa	Predicted RBP	32.73	■■■□□ 2.83
RAP1B-233	ENST00000545720	NLGN2	Q8NFZ4	835 aa		32.73	■■■□□ 2.83
RAP1B-233	ENST00000545720	CCER1	Q8TC90	406 aa	Predicted RBP	32.73	■■■□□ 2.83
RAP1B-233	ENST00000545720	PANK3	Q9H999	370 aa		32.73	■■■□□ 2.83
RAP1B-233	ENST00000545720	PELP1	Q8IZL8	1130 aa	Known RBP	32.72	■■■□□ 2.83
RAP1B-233	ENST00000545720	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	32.72	■■■□□ 2.83
RAP1B-233	ENST00000545720	HMGB2	P26583	209 aa	Known RBP	32.71	■■■□□ 2.83
RAP1B-233	ENST00000545720	TMOD3	Q9NYL9	352 aa		32.69	■■■□□ 2.82
RAP1B-233	ENST00000545720	PHKG2	P15735	406 aa		32.68	■■■□□ 2.82
RAP1B-233	ENST00000545720	FLAD1	Q8NFF5	587 aa		32.68	■■■□□ 2.82
RAP1B-233	ENST00000545720	AK7	Q96M32	723 aa		32.68	■■■□□ 2.82
RAP1B-233	ENST00000545720	IFNL2	Q8IZJ0	200 aa		32.67	■■■□□ 2.82
RAP1B-233	ENST00000545720	AMIGO3	Q86WK7	504 aa		32.65	■■■□□ 2.82
RAP1B-233	ENST00000545720	LOC102724428	A0A0B4J2F2	783 aa		32.64	■■■□□ 2.82
RAP1B-233	ENST00000545720	SIK1	P57059	783 aa		32.64	■■■□□ 2.82
RAP1B-233	ENST00000545720	IGSF1	Q8N6C5	1336 aa		32.64	■■■□□ 2.82
RAP1B-233	ENST00000545720	PHF14	O94880	888 aa		32.63	■■■□□ 2.81
RAP1B-233	ENST00000545720	ASAP1	Q9ULH1	1129 aa		32.63	■■■□□ 2.81
RAP1B-233	ENST00000545720	PLEKHG2	Q9H7P9	1386 aa		32.62	■■■□□ 2.81
RAP1B-233	ENST00000545720	SMIM5	Q71RC9	77 aa		32.61	■■■□□ 2.81
RAP1B-233	ENST00000545720	LINC00116	Q8NCU8	138 aa		32.61	■■■□□ 2.81
RAP1B-233	ENST00000545720	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	32.58	■■■□□ 2.81
RAP1B-233	ENST00000545720	MORC1	Q86VD1	984 aa		32.58	■■■□□ 2.81
RAP1B-233	ENST00000545720	YBX3	P16989	372 aa	Known RBP eCLIP	32.56	■■■□□ 2.8
RAP1B-233	ENST00000545720	ATP6V1A	P38606	617 aa		32.56	■■■□□ 2.8
RAP1B-233	ENST00000545720	ITPK1	Q13572	414 aa		32.56	■■■□□ 2.8
RAP1B-233	ENST00000545720	ATG3	Q9NT62	314 aa		32.56	■■■□□ 2.8
RAP1B-233	ENST00000545720	SSFA2	P28290	1259 aa		32.55	■■■□□ 2.8
RAP1B-233	ENST00000545720	ZNF831	Q5JPB2	1677 aa		32.55	■■■□□ 2.8

Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms