RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 CDCA7Q9BWT1 371 aaPredicted RBP10.68□□□□□ -0.7
SNHG1-224ENST00000545688 OSBPL3Q9H4L5 887 aa10.68□□□□□ -0.7
SNHG1-224ENST00000545688 VSIG8P0DPA2 414 aa10.67□□□□□ -0.7
SNHG1-224ENST00000545688 WASHC4Q2M389 1173 aa10.67□□□□□ -0.7
SNHG1-224ENST00000545688 CYP2U1Q7Z449 544 aa10.67□□□□□ -0.7
SNHG1-224ENST00000545688 MEN1O00255 615 aa10.66□□□□□ -0.7
SNHG1-224ENST00000545688 TMEM132AQ24JP5 1023 aa10.66□□□□□ -0.7
SNHG1-224ENST00000545688 PHTF2Q8N3S3 785 aa10.66□□□□□ -0.7
SNHG1-224ENST00000545688 POM121Q96HA1 1249 aa10.66□□□□□ -0.7
SNHG1-224ENST00000545688 A0A1W2PRU2 124 aa10.65□□□□□ -0.7
SNHG1-224ENST00000545688 SLC35F4A4IF30 521 aa10.65□□□□□ -0.7
SNHG1-224ENST00000545688 TRAK2O60296 914 aa10.65□□□□□ -0.7
SNHG1-224ENST00000545688 TSGA10IPQ3SY00 556 aa10.65□□□□□ -0.7
SNHG1-224ENST00000545688 CCDC155Q8N6L0 562 aa10.65□□□□□ -0.7
SNHG1-224ENST00000545688 RNF144AP50876 292 aaPredicted RBP10.64□□□□□ -0.71
SNHG1-224ENST00000545688 SLFNL1Q499Z3 407 aa10.64□□□□□ -0.71
SNHG1-224ENST00000545688 ESF1Q9H501 851 aaKnown RBP10.64□□□□□ -0.71
SNHG1-224ENST00000545688 INSM1Q01101 510 aaPredicted RBP10.63□□□□□ -0.71
SNHG1-224ENST00000545688 LYSMD3Q7Z3D4 306 aa10.63□□□□□ -0.71
SNHG1-224ENST00000545688 RNF135Q8IUD6 432 aa10.63□□□□□ -0.71
SNHG1-224ENST00000545688 ARHGEF10LQ9HCE6 1279 aa10.63□□□□□ -0.71
SNHG1-224ENST00000545688 DOLKQ9UPQ8 538 aa10.63□□□□□ -0.71
SNHG1-224ENST00000545688 SENP3-EIF4A1A0A087X0R7 540 aa10.62□□□□□ -0.71
SNHG1-224ENST00000545688 FLIIQ13045 1269 aa10.62□□□□□ -0.71
SNHG1-224ENST00000545688 MYCP01106 439 aaPredicted RBP10.61□□□□□ -0.71
SNHG1-224ENST00000545688 SEMA3FQ13275 785 aa10.61□□□□□ -0.71
SNHG1-224ENST00000545688 CLN3Q13286 438 aa10.61□□□□□ -0.71
SNHG1-224ENST00000545688 PRICKLE2Q7Z3G6 844 aa10.61□□□□□ -0.71
SNHG1-224ENST00000545688 RAB6BQ9NRW1 208 aa10.61□□□□□ -0.71
SNHG1-224ENST00000545688 RHOQP17081 205 aa10.6□□□□□ -0.71
SNHG1-224ENST00000545688 GPC1P35052 558 aa10.6□□□□□ -0.71
SNHG1-224ENST00000545688 NLRP3Q96P20 1036 aa10.6□□□□□ -0.71
SNHG1-224ENST00000545688 CHIC2Q9UKJ5 165 aa10.6□□□□□ -0.71
SNHG1-224ENST00000545688 UBTFP17480 764 aaKnown RBP10.59□□□□□ -0.71
SNHG1-224ENST00000545688 ITGA6P23229 1130 aa10.59□□□□□ -0.71
SNHG1-224ENST00000545688 SOX11P35716 441 aa10.59□□□□□ -0.71
SNHG1-224ENST00000545688 OXLD1Q5BKU9 147 aa10.59□□□□□ -0.71
SNHG1-224ENST00000545688 RAD21O60216 631 aa10.58□□□□□ -0.72
SNHG1-224ENST00000545688 GNRH1P01148 92 aa10.58□□□□□ -0.72
SNHG1-224ENST00000545688 GPR161Q8N6U8 529 aaKnown RBP10.58□□□□□ -0.72
SNHG1-224ENST00000545688 SLC27A3Q5K4L6 730 aa10.57□□□□□ -0.72
SNHG1-224ENST00000545688 NANOS1Q8WY41 292 aaKnown RBP10.57□□□□□ -0.72
SNHG1-224ENST00000545688 IL2RAP01589 272 aa10.56□□□□□ -0.72
SNHG1-224ENST00000545688 LORP23490 312 aaPredicted RBP10.56□□□□□ -0.72
SNHG1-224ENST00000545688 USP4Q13107 963 aa10.56□□□□□ -0.72
SNHG1-224ENST00000545688 WWC1Q8IX03 1113 aa10.56□□□□□ -0.72
SNHG1-224ENST00000545688 PLPP7Q8NBV4 271 aa10.56□□□□□ -0.72
SNHG1-224ENST00000545688 GRIP2Q9C0E4 1043 aa10.56□□□□□ -0.72
SNHG1-224ENST00000545688 PIK3CDO00329 1044 aa10.55□□□□□ -0.72
SNHG1-224ENST00000545688 CNKSR1Q969H4 720 aa10.55□□□□□ -0.72
SNHG1-224ENST00000545688 ESYT1Q9BSJ8 1104 aa10.55□□□□□ -0.72
SNHG1-224ENST00000545688 ALG2Q9H553 416 aa10.55□□□□□ -0.72
SNHG1-224ENST00000545688 STK17AQ9UEE5 414 aa10.55□□□□□ -0.72
SNHG1-224ENST00000545688 CDC14CA4D256 554 aa10.54□□□□□ -0.72
SNHG1-224ENST00000545688 STAU1O95793 577 aaKnown RBP10.54□□□□□ -0.72
SNHG1-224ENST00000545688 POU4F2Q12837 409 aa10.54□□□□□ -0.72
SNHG1-224ENST00000545688 VWA5B2Q8N398 1253 aa10.54□□□□□ -0.72
SNHG1-224ENST00000545688 POM121CA8CG34 1229 aa10.53□□□□□ -0.72
SNHG1-224ENST00000545688 KRT76Q01546 638 aa10.53□□□□□ -0.72
SNHG1-224ENST00000545688 MAP7D1Q3KQU3 841 aa10.53□□□□□ -0.72
SNHG1-224ENST00000545688 ZSCAN1Q8NBB4 408 aa10.53□□□□□ -0.72
SNHG1-224ENST00000545688 CUEDC1Q9NWM3 386 aaPredicted RBP10.53□□□□□ -0.72
SNHG1-224ENST00000545688 CENPCQ03188 943 aa10.52□□□□□ -0.73
SNHG1-224ENST00000545688 SIRT1Q96EB6 747 aa10.52□□□□□ -0.73
SNHG1-224ENST00000545688 XAGE2Q96GT9 111 aa10.52□□□□□ -0.73
SNHG1-224ENST00000545688 HRH3Q9Y5N1 445 aa10.52□□□□□ -0.73
SNHG1-224ENST00000545688 SPATA31C2B4DYI2 1134 aa10.51□□□□□ -0.73
SNHG1-224ENST00000545688 NBPF10Q6P3W6 841 aaKnown RBP10.51□□□□□ -0.73
SNHG1-224ENST00000545688 SV2AQ7L0J3 742 aa10.51□□□□□ -0.73
SNHG1-224ENST00000545688 NBPF15Q8N660 670 aa10.51□□□□□ -0.73
SNHG1-224ENST00000545688 COL25A1Q9BXS0 654 aaPredicted RBP10.51□□□□□ -0.73
SNHG1-224ENST00000545688 ETNK1Q9HBU6 452 aa10.51□□□□□ -0.73
SNHG1-224ENST00000545688 ESCO1Q5FWF5 840 aa10.5□□□□□ -0.73
SNHG1-224ENST00000545688 CLUAP1Q96AJ1 413 aa10.5□□□□□ -0.73
SNHG1-224ENST00000545688 TAS1R3Q7RTX0 852 aa10.49□□□□□ -0.73
SNHG1-224ENST00000545688 ADAMTS19Q8TE59 1207 aa10.49□□□□□ -0.73
SNHG1-224ENST00000545688 CNTNAP3BQ96NU0 1288 aa10.49□□□□□ -0.73
SNHG1-224ENST00000545688 CNTNAP3Q9BZ76 1288 aa10.49□□□□□ -0.73
SNHG1-224ENST00000545688 FHDC1Q9C0D6 1143 aaPredicted RBP10.49□□□□□ -0.73
SNHG1-224ENST00000545688 DYRK1BQ9Y463 629 aa10.49□□□□□ -0.73
SNHG1-224ENST00000545688 WASLO00401 505 aaPredicted RBP10.48□□□□□ -0.73
SNHG1-224ENST00000545688 SKIP12755 728 aa10.48□□□□□ -0.73
SNHG1-224ENST00000545688 RNFT1Q5M7Z0 435 aa10.48□□□□□ -0.73
SNHG1-224ENST00000545688 ZSCAN10Q96SZ4 725 aaPredicted RBP10.48□□□□□ -0.73
SNHG1-224ENST00000545688 GAS2L1Q99501 681 aaPredicted RBP10.48□□□□□ -0.73
SNHG1-224ENST00000545688 SCNN1DP51172 638 aa10.47□□□□□ -0.73
SNHG1-224ENST00000545688 WDR44Q5JSH3 913 aa10.47□□□□□ -0.73
SNHG1-224ENST00000545688 RIPOR1Q6ZS17 1223 aa10.47□□□□□ -0.73
SNHG1-224ENST00000545688 ZNF837Q96EG3 531 aaPredicted RBP10.47□□□□□ -0.73
SNHG1-224ENST00000545688 GDF10P55107 478 aa10.46□□□□□ -0.73
SNHG1-224ENST00000545688 TIMMDC1Q9NPL8 285 aa10.46□□□□□ -0.73
SNHG1-224ENST00000545688 PHKA2P46019 1235 aa10.45□□□□□ -0.74
SNHG1-224ENST00000545688 TLR1Q15399 786 aa10.45□□□□□ -0.74
SNHG1-224ENST00000545688 TMEM214Q6NUQ4 689 aaKnown RBP10.45□□□□□ -0.74
SNHG1-224ENST00000545688 TRIM22Q8IYM9 498 aa10.45□□□□□ -0.74
SNHG1-224ENST00000545688 NFATC2IPQ8NCF5 419 aa10.45□□□□□ -0.74
SNHG1-224ENST00000545688 DBN1Q16643 649 aa10.44□□□□□ -0.74
SNHG1-224ENST00000545688 EML3Q32P44 896 aa10.44□□□□□ -0.74
SNHG1-224ENST00000545688 HDGFL1Q5TGJ6 251 aa10.44□□□□□ -0.74
SNHG1-224ENST00000545688 FAM181BA6NEQ2 426 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms