RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 MEGF6O75095 1541 aa27.42■■□□□ 1.98
CHD4-213ENST00000545584 PPM1GO15355 546 aaPredicted RBP27.42■■□□□ 1.98
CHD4-213ENST00000545584 TATP17735 454 aaPredicted RBP27.42■■□□□ 1.98
CHD4-213ENST00000545584 EMILIN1Q9Y6C2 1016 aa27.42■■□□□ 1.98
CHD4-213ENST00000545584 BTAF1O14981 1849 aa27.41■■□□□ 1.98
CHD4-213ENST00000545584 SLC15A2Q16348 729 aa27.41■■□□□ 1.98
CHD4-213ENST00000545584 SYTL4Q96C24 671 aaPredicted RBP27.41■■□□□ 1.98
CHD4-213ENST00000545584 PPP1R1BQ9UD71 204 aaPredicted RBP27.41■■□□□ 1.98
CHD4-213ENST00000545584 PRIM1P49642 420 aaKnown RBP27.37■■□□□ 1.97
CHD4-213ENST00000545584 PANK3Q9H999 370 aa27.36■■□□□ 1.97
CHD4-213ENST00000545584 WASHC2AQ641Q2 1341 aa27.35■■□□□ 1.97
CHD4-213ENST00000545584 SHANK3Q9BYB0 1731 aa27.34■■□□□ 1.97
CHD4-213ENST00000545584 CASZ1Q86V15 1759 aa27.34■■□□□ 1.97
CHD4-213ENST00000545584 SLC27A3Q5K4L6 730 aa27.33■■□□□ 1.97
CHD4-213ENST00000545584 PCDH11XQ9BZA7 1347 aa27.33■■□□□ 1.97
CHD4-213ENST00000545584 PCDH11YQ9BZA8 1340 aa27.33■■□□□ 1.97
CHD4-213ENST00000545584 DOT1LQ8TEK3 1739 aa27.33■■□□□ 1.96
CHD4-213ENST00000545584 MAP2P11137 1827 aaKnown RBP27.32■■□□□ 1.96
CHD4-213ENST00000545584 ZBTB7AO95365 584 aa27.32■■□□□ 1.96
CHD4-213ENST00000545584 PDGFDQ9GZP0 370 aaPredicted RBP27.32■■□□□ 1.96
CHD4-213ENST00000545584 POLKQ9UBT6 870 aa27.32■■□□□ 1.96
CHD4-213ENST00000545584 TNNT2P45379 298 aaPredicted RBP27.31■■□□□ 1.96
CHD4-213ENST00000545584 ANKRD26Q9UPS8 1709 aa27.3■■□□□ 1.96
CHD4-213ENST00000545584 LRRC4BQ9NT99 713 aa27.29■■□□□ 1.96
CHD4-213ENST00000545584 NSD2O96028 1365 aa27.28■■□□□ 1.96
CHD4-213ENST00000545584 PAPPAQ13219 1627 aa27.27■■□□□ 1.96
CHD4-213ENST00000545584 ATF5Q9Y2D1 282 aaPredicted RBP27.27■■□□□ 1.96
CHD4-213ENST00000545584 EYA1Q99502 592 aa27.26■■□□□ 1.95
CHD4-213ENST00000545584 MTFR1LQ9H019 292 aa27.26■■□□□ 1.95
CHD4-213ENST00000545584 ZNF827Q17R98 1081 aa27.25■■□□□ 1.95
CHD4-213ENST00000545584 SPG7Q9UQ90 795 aa27.25■■□□□ 1.95
CHD4-213ENST00000545584 NCAPD2Q15021 1401 aa27.24■■□□□ 1.95
CHD4-213ENST00000545584 KNSTRNQ9Y448 316 aa27.24■■□□□ 1.95
CHD4-213ENST00000545584 DCAF8L1A6NGE4 600 aa27.23■■□□□ 1.95
CHD4-213ENST00000545584 CYP27B1O15528 508 aa27.22■■□□□ 1.95
CHD4-213ENST00000545584 MORC1Q86VD1 984 aa27.22■■□□□ 1.95
CHD4-213ENST00000545584 AKT1S1Q96B36 256 aa27.22■■□□□ 1.95
CHD4-213ENST00000545584 CCNL1Q9UK58 526 aaPredicted RBP27.22■■□□□ 1.95
CHD4-213ENST00000545584 PTGER2P43116 358 aa27.21■■□□□ 1.95
CHD4-213ENST00000545584 EIF4A2Q14240 407 aaKnown RBP27.21■■□□□ 1.95
CHD4-213ENST00000545584 LY75O60449 1722 aa27.2■■□□□ 1.94
CHD4-213ENST00000545584 KCNQ4P56696 695 aa27.2■■□□□ 1.94
CHD4-213ENST00000545584 MPRIPQ6WCQ1 1025 aa27.2■■□□□ 1.94
CHD4-213ENST00000545584 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.2■■□□□ 1.947e-10■■■□□ 19
CHD4-213ENST00000545584 PKD1L3Q7Z443 1732 aa27.19■■□□□ 1.94
CHD4-213ENST00000545584 HMGB2P26583 209 aaKnown RBP27.19■■□□□ 1.94
CHD4-213ENST00000545584 TFCP2L1Q9NZI6 479 aa27.19■■□□□ 1.94
CHD4-213ENST00000545584 SLC16A10Q8TF71 515 aa27.17■■□□□ 1.94
CHD4-213ENST00000545584 KIF7Q2M1P5 1343 aa27.16■■□□□ 1.94
CHD4-213ENST00000545584 NKX1-1Q15270 411 aaPredicted RBP27.15■■□□□ 1.94
CHD4-213ENST00000545584 IFNL2Q8IZJ0 200 aa27.14■■□□□ 1.94
CHD4-213ENST00000545584 SMARCC1Q92922 1105 aaPredicted RBP27.14■■□□□ 1.94
CHD4-213ENST00000545584 QSER1Q2KHR3 1735 aa27.13■■□□□ 1.93
CHD4-213ENST00000545584 PALLDQ8WX93 1383 aa27.13■■□□□ 1.93
CHD4-213ENST00000545584 SGIP1Q9BQI5 828 aa27.13■■□□□ 1.93
CHD4-213ENST00000545584 PNPLA7Q6ZV29 1317 aa27.13■■□□□ 1.93
CHD4-213ENST00000545584 IGSF1Q8N6C5 1336 aa27.13■■□□□ 1.93
CHD4-213ENST00000545584 ARXQ96QS3 562 aa27.12■■□□□ 1.93
CHD4-213ENST00000545584 PLEKHG2Q9H7P9 1386 aa27.11■■□□□ 1.93
CHD4-213ENST00000545584 PHKG2P15735 406 aa27.1■■□□□ 1.93
CHD4-213ENST00000545584 FHDC1Q9C0D6 1143 aaPredicted RBP27.1■■□□□ 1.93
CHD4-213ENST00000545584 TOGARAM1Q9Y4F4 1720 aa27.1■■□□□ 1.93
CHD4-213ENST00000545584 ITGB4P16144 1822 aa27.09■■□□□ 1.93
CHD4-213ENST00000545584 POLD1P28340 1107 aa27.09■■□□□ 1.93
CHD4-213ENST00000545584 PIGBQ92521 554 aa27.09■■□□□ 1.93
CHD4-213ENST00000545584 TMOD3Q9NYL9 352 aa27.09■■□□□ 1.93
CHD4-213ENST00000545584 MSH5O43196 834 aa27.08■■□□□ 1.93
CHD4-213ENST00000545584 AMER1Q5JTC6 1135 aaPredicted RBP27.08■■□□□ 1.93
CHD4-213ENST00000545584 SYT17Q9BSW7 474 aa27.08■■□□□ 1.93
CHD4-213ENST00000545584 PLEKHO1Q53GL0 409 aaPredicted RBP27.07■■□□□ 1.92
CHD4-213ENST00000545584 TUBGCP6Q96RT7 1819 aa27.05■■□□□ 1.92
CHD4-213ENST00000545584 HSP90AB1P08238 724 aaKnown RBP27.04■■□□□ 1.92
CHD4-213ENST00000545584 AMOTQ4VCS5 1084 aa27.04■■□□□ 1.92
CHD4-213ENST00000545584 C5P01031 1676 aa27.04■■□□□ 1.92
CHD4-213ENST00000545584 FLAD1Q8NFF5 587 aa27.03■■□□□ 1.92
CHD4-213ENST00000545584 COL23A1Q86Y22 540 aaPredicted RBP27.02■■□□□ 1.92
CHD4-213ENST00000545584 AK7Q96M32 723 aa27.01■■□□□ 1.91
CHD4-213ENST00000545584 LOC102724428A0A0B4J2F2 783 aa27■■□□□ 1.91
CHD4-213ENST00000545584 PER1O15534 1290 aaPredicted RBP27■■□□□ 1.91
CHD4-213ENST00000545584 YY1P25490 414 aa27■■□□□ 1.91
CHD4-213ENST00000545584 SIK1P57059 783 aa27■■□□□ 1.91
CHD4-213ENST00000545584 SULT6B1Q6IMI4 303 aa27■■□□□ 1.91
CHD4-213ENST00000545584 ZNF530Q6P9A1 599 aaPredicted RBP27■■□□□ 1.91
CHD4-213ENST00000545584 KLHL34Q8N239 644 aa27■■□□□ 1.91
CHD4-213ENST00000545584 MAP3K5Q99683 1374 aa26.99■■□□□ 1.91
CHD4-213ENST00000545584 ERVV-2B6SEH9 535 aa26.99■■□□□ 1.91
CHD4-213ENST00000545584 IL13P35225 146 aa26.99■■□□□ 1.91
CHD4-213ENST00000545584 CC2D1BQ5T0F9 858 aaKnown RBP26.99■■□□□ 1.91
CHD4-213ENST00000545584 AEBP1Q8IUX7 1158 aa26.99■■□□□ 1.91
CHD4-213ENST00000545584 DCAF5Q96JK2 942 aa26.99■■□□□ 1.91
CHD4-213ENST00000545584 TAF1LQ8IZX4 1826 aa26.99■■□□□ 1.91
CHD4-213ENST00000545584 MTHFSP49914 203 aa26.98■■□□□ 1.91
CHD4-213ENST00000545584 C1orf141Q5JVX7 400 aa26.98■■□□□ 1.91
CHD4-213ENST00000545584 ASAP1Q9ULH1 1129 aa26.98■■□□□ 1.91
CHD4-213ENST00000545584 C4BP0C0L5 1744 aa26.96■■□□□ 1.91
CHD4-213ENST00000545584 COL24A1Q17RW2 1714 aa26.96■■□□□ 1.91
CHD4-213ENST00000545584 ATP6V1AP38606 617 aa26.95■■□□□ 1.9
CHD4-213ENST00000545584 ATG3Q9NT62 314 aa26.95■■□□□ 1.9
CHD4-213ENST00000545584 KDRP35968 1356 aa26.94■■□□□ 1.9
CHD4-213ENST00000545584 CABP4P57796 275 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms