RNA–Protein interactions for RNA: ENST00000545467.5

LDHA-224, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-224ENST00000545467 ITSN1Q15811 1721 aa10.79□□□□□ -0.68
LDHA-224ENST00000545467 QSER1Q2KHR3 1735 aa10.79□□□□□ -0.68
LDHA-224ENST00000545467 PLEKHG3A1L390 1219 aa10.79□□□□□ -0.68
LDHA-224ENST00000545467 ACSBG1Q96GR2 724 aa10.79□□□□□ -0.68
LDHA-224ENST00000545467 TFCP2L1Q9NZI6 479 aa10.79□□□□□ -0.68
LDHA-224ENST00000545467 CCDC61Q9Y6R9 512 aa10.79□□□□□ -0.68
LDHA-224ENST00000545467 USP6P35125 1406 aa10.78□□□□□ -0.68
LDHA-224ENST00000545467 DCAF11Q8TEB1 546 aa10.78□□□□□ -0.68
LDHA-224ENST00000545467 PCNTO95613 3336 aa10.78□□□□□ -0.68
LDHA-224ENST00000545467 NHSQ6T4R5 1651 aa10.77□□□□□ -0.69
LDHA-224ENST00000545467 ZBTB7CA1YPR0 619 aa10.77□□□□□ -0.69
LDHA-224ENST00000545467 AXIN2Q9Y2T1 843 aa10.77□□□□□ -0.69
LDHA-224ENST00000545467 WNK3Q9BYP7 1800 aa10.76□□□□□ -0.69
LDHA-224ENST00000545467 ADGRB1O14514 1584 aa10.75□□□□□ -0.69
LDHA-224ENST00000545467 HNRNPUQ00839 825 aaKnown RBP eCLIP10.75□□□□□ -0.69
LDHA-224ENST00000545467 RBM46Q8TBY0 533 aaKnown RBP10.75□□□□□ -0.69
LDHA-224ENST00000545467 CDK19Q9BWU1 502 aa10.75□□□□□ -0.69
LDHA-224ENST00000545467 MRS2Q9HD23 443 aa10.75□□□□□ -0.69
LDHA-224ENST00000545467 ZBED9Q6R2W3 1325 aa10.75□□□□□ -0.69
LDHA-224ENST00000545467 WDR90Q96KV7 1748 aa10.75□□□□□ -0.69
LDHA-224ENST00000545467 TNS2Q63HR2 1409 aa10.75□□□□□ -0.69
LDHA-224ENST00000545467 CSB-PGBD3P0DP91 1061 aa10.74□□□□□ -0.69
LDHA-224ENST00000545467 NLRP6P59044 892 aa10.74□□□□□ -0.69
LDHA-224ENST00000545467 HTRA3P83110 453 aa10.74□□□□□ -0.69
LDHA-224ENST00000545467 ARHGEF28Q8N1W1 1705 aaKnown RBP10.74□□□□□ -0.69
LDHA-224ENST00000545467 COL18A1P39060 1754 aa10.73□□□□□ -0.69
LDHA-224ENST00000545467 BTAF1O14981 1849 aa10.73□□□□□ -0.69
LDHA-224ENST00000545467 FSTL1Q12841 308 aa10.73□□□□□ -0.69
LDHA-224ENST00000545467 ZNF219Q9P2Y4 722 aaPredicted RBP10.72□□□□□ -0.69
LDHA-224ENST00000545467 KDM2AQ9Y2K7 1162 aa10.72□□□□□ -0.69
LDHA-224ENST00000545467 ST20-MTHFSA0A0A6YYL1 179 aa10.71□□□□□ -0.69
LDHA-224ENST00000545467 INSRP06213 1382 aa10.71□□□□□ -0.69
LDHA-224ENST00000545467 HSPA1AP0DMV8 641 aaKnown RBP10.71□□□□□ -0.69
LDHA-224ENST00000545467 HSPA1BP0DMV9 641 aaKnown RBP10.71□□□□□ -0.69
LDHA-224ENST00000545467 PPIP5K1Q6PFW1 1433 aa10.71□□□□□ -0.69
LDHA-224ENST00000545467 ARHGEF25Q86VW2 580 aa10.71□□□□□ -0.69
LDHA-224ENST00000545467 COL23A1Q86Y22 540 aaPredicted RBP10.71□□□□□ -0.69
LDHA-224ENST00000545467 TUBGCP6Q96RT7 1819 aa10.7□□□□□ -0.7
LDHA-224ENST00000545467 SLIT3O75094 1523 aa10.7□□□□□ -0.7
LDHA-224ENST00000545467 ABCC6O95255 1503 aa10.7□□□□□ -0.7
LDHA-224ENST00000545467 IGSF1Q8N6C5 1336 aa10.7□□□□□ -0.7
LDHA-224ENST00000545467 MYBBP1AQ9BQG0 1328 aaKnown RBP10.7□□□□□ -0.7
LDHA-224ENST00000545467 RALBP1Q15311 655 aa10.7□□□□□ -0.7
LDHA-224ENST00000545467 ERICH6BQ5W0A0 696 aa10.7□□□□□ -0.7
LDHA-224ENST00000545467 C16orf71Q8IYS4 520 aaPredicted RBP10.7□□□□□ -0.7
LDHA-224ENST00000545467 NMRK2Q9NPI5 230 aa10.7□□□□□ -0.7
LDHA-224ENST00000545467 CPSF1Q10570 1443 aaKnown RBP10.69□□□□□ -0.7
LDHA-224ENST00000545467 ABCB7O75027 752 aa10.69□□□□□ -0.7
LDHA-224ENST00000545467 KCNQ4P56696 695 aa10.69□□□□□ -0.7
LDHA-224ENST00000545467 MSL1Q68DK7 614 aa10.69□□□□□ -0.7
LDHA-224ENST00000545467 KCNH5Q8NCM2 988 aa10.69□□□□□ -0.7
LDHA-224ENST00000545467 SLC24A1O60721 1099 aa10.68□□□□□ -0.7
LDHA-224ENST00000545467 IL2RBP14784 551 aa10.68□□□□□ -0.7
LDHA-224ENST00000545467 QRICH2Q9H0J4 1663 aa10.67□□□□□ -0.7
LDHA-224ENST00000545467 TMF1P82094 1093 aa10.67□□□□□ -0.7
LDHA-224ENST00000545467 FKBP8Q14318 412 aa10.67□□□□□ -0.7
LDHA-224ENST00000545467 FLAD1Q8NFF5 587 aa10.67□□□□□ -0.7
LDHA-224ENST00000545467 SMG6Q86US8 1419 aaKnown RBP10.67□□□□□ -0.7
LDHA-224ENST00000545467 HMGB2P26583 209 aaKnown RBP10.66□□□□□ -0.7
LDHA-224ENST00000545467 CDCA8Q53HL2 280 aa10.66□□□□□ -0.7
LDHA-224ENST00000545467 POLR3GLQ9BT43 218 aa10.66□□□□□ -0.7
LDHA-224ENST00000545467 CCNL1Q9UK58 526 aaPredicted RBP10.66□□□□□ -0.7
LDHA-224ENST00000545467 SBNO2Q9Y2G9 1366 aa10.65□□□□□ -0.7
LDHA-224ENST00000545467 TESK2Q96S53 571 aa10.65□□□□□ -0.7
LDHA-224ENST00000545467 CICQ96RK0 1608 aaPredicted RBP10.65□□□□□ -0.7
LDHA-224ENST00000545467 RGPD5Q99666 1765 aa10.65□□□□□ -0.71
LDHA-224ENST00000545467 CCDC184Q52MB2 194 aa10.64□□□□□ -0.71
LDHA-224ENST00000545467 FAM9BQ8IZU0 186 aa10.64□□□□□ -0.71
LDHA-224ENST00000545467 NLRP2Q9NX02 1062 aa10.64□□□□□ -0.71
LDHA-224ENST00000545467 PRIM1P49642 420 aaKnown RBP10.63□□□□□ -0.71
LDHA-224ENST00000545467 NBPF1Q3BBV0 1214 aa10.63□□□□□ -0.71
LDHA-224ENST00000545467 SMC1BQ8NDV3 1235 aa10.63□□□□□ -0.71
LDHA-224ENST00000545467 NPC1L1Q9UHC9 1359 aa10.63□□□□□ -0.71
LDHA-224ENST00000545467 SRPK2P78362 688 aaKnown RBP10.62□□□□□ -0.71
LDHA-224ENST00000545467 TMC1Q8TDI8 760 aa10.62□□□□□ -0.71
LDHA-224ENST00000545467 SYTL4Q96C24 671 aaPredicted RBP10.62□□□□□ -0.71
LDHA-224ENST00000545467 ANKRD36BQ8N2N9 1353 aa10.62□□□□□ -0.71
LDHA-224ENST00000545467 LY75O60449 1722 aa10.61□□□□□ -0.71
LDHA-224ENST00000545467 ERBB3P21860 1342 aa10.61□□□□□ -0.71
LDHA-224ENST00000545467 C10orf71Q711Q0 1435 aa10.61□□□□□ -0.71
LDHA-224ENST00000545467 SOX12O15370 315 aa10.61□□□□□ -0.71
LDHA-224ENST00000545467 FAM161AQ3B820 660 aa10.61□□□□□ -0.71
LDHA-224ENST00000545467 DDX54Q8TDD1 881 aaKnown RBP10.61□□□□□ -0.71
LDHA-224ENST00000545467 CABP1Q9NZU7 370 aa10.61□□□□□ -0.71
LDHA-224ENST00000545467 KDM2BQ8NHM5 1336 aa10.6□□□□□ -0.71
LDHA-224ENST00000545467 ARHGAP27Q6ZUM4 889 aa10.6□□□□□ -0.71
LDHA-224ENST00000545467 RBM42Q9BTD8 480 aaKnown RBP10.6□□□□□ -0.71
LDHA-224ENST00000545467 PRDM10Q9NQV6 1147 aa10.6□□□□□ -0.71
LDHA-224ENST00000545467 PLEKHG2Q9H7P9 1386 aa10.6□□□□□ -0.71
LDHA-224ENST00000545467 PIK3C2AO00443 1686 aa10.6□□□□□ -0.71
LDHA-224ENST00000545467 PNISRQ8TF01 805 aaKnown RBP10.59□□□□□ -0.71
LDHA-224ENST00000545467 CABP2Q9NPB3 220 aa10.59□□□□□ -0.71
LDHA-224ENST00000545467 NSD2O96028 1365 aa10.59□□□□□ -0.71
LDHA-224ENST00000545467 TGFB2P61812 414 aa10.58□□□□□ -0.72
LDHA-224ENST00000545467 C9orf131Q5VYM1 1079 aa10.58□□□□□ -0.72
LDHA-224ENST00000545467 ZNF692Q9BU19 519 aaPredicted RBP10.58□□□□□ -0.72
LDHA-224ENST00000545467 RRAGCQ9HB90 399 aa10.58□□□□□ -0.72
LDHA-224ENST00000545467 NUDCQ9Y266 331 aa10.58□□□□□ -0.72
LDHA-224ENST00000545467 BCS1LQ9Y276 419 aa10.58□□□□□ -0.72
LDHA-224ENST00000545467 TTC21BQ7Z4L5 1316 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms