RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 TERF2IPQ9NYB0 399 aa20.99■□□□□ 0.95
RTN3-214ENST00000545432 TUBGCP6Q96RT7 1819 aa20.99■□□□□ 0.95
RTN3-214ENST00000545432 A0A1W2PP64 1363 aa20.98■□□□□ 0.95
RTN3-214ENST00000545432 KLHL34Q8N239 644 aa20.98■□□□□ 0.95
RTN3-214ENST00000545432 PELP1Q8IZL8 1130 aaKnown RBP20.97■□□□□ 0.95
RTN3-214ENST00000545432 TMC1Q8TDI8 760 aa20.97■□□□□ 0.95
RTN3-214ENST00000545432 CCNL1Q9UK58 526 aaPredicted RBP20.97■□□□□ 0.95
RTN3-214ENST00000545432 CD2APQ9Y5K6 639 aa20.97■□□□□ 0.95
RTN3-214ENST00000545432 MAP3K19Q56UN5 1328 aa20.97■□□□□ 0.95
RTN3-214ENST00000545432 CEP350Q5VT06 3117 aa20.97■□□□□ 0.95
RTN3-214ENST00000545432 FAM208AQ9UK61 1670 aaKnown RBP20.96■□□□□ 0.95
RTN3-214ENST00000545432 HOXC9P31274 260 aa20.96■□□□□ 0.95
RTN3-214ENST00000545432 SYTL4Q96C24 671 aaPredicted RBP20.95■□□□□ 0.94
RTN3-214ENST00000545432 HMGB2P26583 209 aaKnown RBP20.94■□□□□ 0.94
RTN3-214ENST00000545432 CGNL1Q0VF96 1302 aa20.94■□□□□ 0.94
RTN3-214ENST00000545432 ADCY9O60503 1353 aa20.94■□□□□ 0.94
RTN3-214ENST00000545432 LTV1Q96GA3 475 aaPredicted RBP20.93■□□□□ 0.94
RTN3-214ENST00000545432 CARD11Q9BXL7 1154 aa20.93■□□□□ 0.94
RTN3-214ENST00000545432 ATP10DQ9P241 1426 aa20.93■□□□□ 0.94
RTN3-214ENST00000545432 MEGF6O75095 1541 aa20.93■□□□□ 0.94
RTN3-214ENST00000545432 FLAD1Q8NFF5 587 aa20.92■□□□□ 0.94
RTN3-214ENST00000545432 USP47Q96K76 1375 aa20.91■□□□□ 0.94
RTN3-214ENST00000545432 DOT1LQ8TEK3 1739 aa20.9■□□□□ 0.94
RTN3-214ENST00000545432 FBLN1P23142 703 aa20.9■□□□□ 0.94
RTN3-214ENST00000545432 NEUROD1Q13562 356 aa20.9■□□□□ 0.94
RTN3-214ENST00000545432 NBPF6Q5VWK0 638 aa20.9■□□□□ 0.94
RTN3-214ENST00000545432 COG3Q96JB2 828 aa20.9■□□□□ 0.94
RTN3-214ENST00000545432 NBPF4Q96M43 638 aa20.9■□□□□ 0.94
RTN3-214ENST00000545432 TESK2Q96S53 571 aa20.89■□□□□ 0.93
RTN3-214ENST00000545432 RTL1A6NKG5 1358 aa20.88■□□□□ 0.93
RTN3-214ENST00000545432 HSPA6P17066 643 aa20.88■□□□□ 0.93
RTN3-214ENST00000545432 AMPHP49418 695 aa20.88■□□□□ 0.93
RTN3-214ENST00000545432 MSH5O43196 834 aa20.86■□□□□ 0.93
RTN3-214ENST00000545432 MSL1Q68DK7 614 aa20.86■□□□□ 0.93
RTN3-214ENST00000545432 GPBP1L1Q9HC44 474 aaPredicted RBP20.86■□□□□ 0.93
RTN3-214ENST00000545432 SLC24A1O60721 1099 aa20.83■□□□□ 0.93
RTN3-214ENST00000545432 FYB1O15117 783 aa20.82■□□□□ 0.92
RTN3-214ENST00000545432 RAPGEF4Q8WZA2 1011 aa20.82■□□□□ 0.92
RTN3-214ENST00000545432 PALLDQ8WX93 1383 aa20.82■□□□□ 0.92
RTN3-214ENST00000545432 TATP17735 454 aaPredicted RBP20.81■□□□□ 0.92
RTN3-214ENST00000545432 AMIGO3Q86WK7 504 aa20.81■□□□□ 0.92
RTN3-214ENST00000545432 RGPD2P0DJD1 1756 aa20.81■□□□□ 0.92
RTN3-214ENST00000545432 PCDH11XQ9BZA7 1347 aa20.8■□□□□ 0.92
RTN3-214ENST00000545432 PCDH11YQ9BZA8 1340 aa20.8■□□□□ 0.92
RTN3-214ENST00000545432 CYP27B1O15528 508 aa20.8■□□□□ 0.92
RTN3-214ENST00000545432 SMARCC1Q92922 1105 aaPredicted RBP20.8■□□□□ 0.92
RTN3-214ENST00000545432 INSRP06213 1382 aa20.8■□□□□ 0.92
RTN3-214ENST00000545432 C5P01031 1676 aa20.8■□□□□ 0.92
RTN3-214ENST00000545432 KIF3CO14782 793 aa20.79■□□□□ 0.92
RTN3-214ENST00000545432 RRS1Q15050 365 aaKnown RBP20.79■□□□□ 0.92
RTN3-214ENST00000545432 NKX1-1Q15270 411 aaPredicted RBP20.79■□□□□ 0.92
RTN3-214ENST00000545432 KIF24Q5T7B8 1368 aa20.79■□□□□ 0.92
RTN3-214ENST00000545432 USHBP1Q8N6Y0 703 aa20.78■□□□□ 0.92
RTN3-214ENST00000545432 TAF1LQ8IZX4 1826 aa20.78■□□□□ 0.92
RTN3-214ENST00000545432 IGSF1Q8N6C5 1336 aa20.77■□□□□ 0.91
RTN3-214ENST00000545432 ST20-MTHFSA0A0A6YYL1 179 aa20.76■□□□□ 0.91
RTN3-214ENST00000545432 SSFA2P28290 1259 aa20.76■□□□□ 0.91
RTN3-214ENST00000545432 HSP90AB2PQ58FF8 381 aa20.76■□□□□ 0.91
RTN3-214ENST00000545432 MPRIPQ6WCQ1 1025 aa20.76■□□□□ 0.91
RTN3-214ENST00000545432 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.75■□□□□ 0.91
RTN3-214ENST00000545432 PIGBQ92521 554 aa20.75■□□□□ 0.91
RTN3-214ENST00000545432 NCAPD2Q15021 1401 aa20.75■□□□□ 0.91
RTN3-214ENST00000545432 NSD3Q9BZ95 1437 aa20.75■□□□□ 0.91
RTN3-214ENST00000545432 C4BP0C0L5 1744 aa20.74■□□□□ 0.91
RTN3-214ENST00000545432 SMG6Q86US8 1419 aaKnown RBP20.74■□□□□ 0.91
RTN3-214ENST00000545432 AK7Q96M32 723 aa20.74■□□□□ 0.91
RTN3-214ENST00000545432 TOGARAM1Q9Y4F4 1720 aa20.74■□□□□ 0.91
RTN3-214ENST00000545432 GGNBP2Q9H3C7 697 aa20.73■□□□□ 0.91
RTN3-214ENST00000545432 FLT4P35916 1363 aa20.72■□□□□ 0.91
RTN3-214ENST00000545432 CICQ96RK0 1608 aaPredicted RBP20.71■□□□□ 0.91
RTN3-214ENST00000545432 UBR3Q6ZT12 1888 aa20.71■□□□□ 0.91
RTN3-214ENST00000545432 SMIM5Q71RC9 77 aa20.71■□□□□ 0.91
RTN3-214ENST00000545432 DNAJC5GQ8N7S2 189 aa20.71■□□□□ 0.91
RTN3-214ENST00000545432 ZNF526Q8TF50 670 aaPredicted RBP20.71■□□□□ 0.91
RTN3-214ENST00000545432 MAP2P11137 1827 aaKnown RBP20.71■□□□□ 0.91
RTN3-214ENST00000545432 LOC102724428A0A0B4J2F2 783 aa20.7■□□□□ 0.9
RTN3-214ENST00000545432 SIK1P57059 783 aa20.7■□□□□ 0.9
RTN3-214ENST00000545432 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.7■□□□□ 0.9
RTN3-214ENST00000545432 LINC00116Q8NCU8 138 aa20.69■□□□□ 0.9
RTN3-214ENST00000545432 APLP1P51693 650 aa20.68■□□□□ 0.9
RTN3-214ENST00000545432 PHF14O94880 888 aa20.67■□□□□ 0.9
RTN3-214ENST00000545432 TGFB2P61812 414 aa20.67■□□□□ 0.9
RTN3-214ENST00000545432 ITPK1Q13572 414 aa20.67■□□□□ 0.9
RTN3-214ENST00000545432 TONSLQ96HA7 1378 aa20.67■□□□□ 0.9
RTN3-214ENST00000545432 ITGB4P16144 1822 aa20.67■□□□□ 0.9
RTN3-214ENST00000545432 TOMM70O94826 608 aa20.66■□□□□ 0.9
RTN3-214ENST00000545432 PKD1L3Q7Z443 1732 aa20.66■□□□□ 0.9
RTN3-214ENST00000545432 PXDNLA1KZ92 1463 aa20.64■□□□□ 0.89
RTN3-214ENST00000545432 ASAP1Q9ULH1 1129 aa20.64■□□□□ 0.89
RTN3-214ENST00000545432 SPG7Q9UQ90 795 aa20.64■□□□□ 0.89
RTN3-214ENST00000545432 MMP10P09238 476 aa20.63■□□□□ 0.89
RTN3-214ENST00000545432 EMILIN1Q9Y6C2 1016 aa20.63■□□□□ 0.89
RTN3-214ENST00000545432 KIF13BQ9NQT8 1826 aa20.62■□□□□ 0.89
RTN3-214ENST00000545432 WASHC2AQ641Q2 1341 aa20.62■□□□□ 0.89
RTN3-214ENST00000545432 TMF1P82094 1093 aa20.62■□□□□ 0.89
RTN3-214ENST00000545432 CARD14Q9BXL6 1004 aa20.62■□□□□ 0.89
RTN3-214ENST00000545432 WWC3Q9ULE0 1092 aa20.62■□□□□ 0.89
RTN3-214ENST00000545432 PLEKHG2Q9H7P9 1386 aa20.61■□□□□ 0.89
RTN3-214ENST00000545432 GNPATO15228 680 aa20.61■□□□□ 0.89
RTN3-214ENST00000545432 ATP6V1AP38606 617 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms