RNA–Protein interactions for RNA: ENST00000544972.1

TNC-213, Transcript of tenascin C, humanhuman

TSL 5

Gene TNC, Length 1,844 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-213ENST00000544972 GNAT3A8MTJ3 354 aa14.71□□□□□ -0.05
TNC-213ENST00000544972 C20orf194Q5TEA3 1177 aa14.71□□□□□ -0.05
TNC-213ENST00000544972 MAP3K5Q99683 1374 aa14.71□□□□□ -0.05
TNC-213ENST00000544972 COL16A1Q07092 1604 aaPredicted RBP14.71□□□□□ -0.06
TNC-213ENST00000544972 PHLPP1O60346 1717 aa14.71□□□□□ -0.06
TNC-213ENST00000544972 CHL1O00533 1208 aa14.71□□□□□ -0.06
TNC-213ENST00000544972 TOM1O60784 492 aa14.71□□□□□ -0.06
TNC-213ENST00000544972 HAP1P54257 671 aaPredicted RBP14.71□□□□□ -0.06
TNC-213ENST00000544972 RTF1Q92541 710 aaKnown RBP14.71□□□□□ -0.06
TNC-213ENST00000544972 NLRP2Q9NX02 1062 aa14.71□□□□□ -0.06
TNC-213ENST00000544972 PPP4R2Q9NY27 417 aa14.71□□□□□ -0.06
TNC-213ENST00000544972 COL5A2P05997 1499 aaPredicted RBP14.69□□□□□ -0.06
TNC-213ENST00000544972 IL17REQ8NFR9 667 aa14.69□□□□□ -0.06
TNC-213ENST00000544972 EXOC6Q8TAG9 804 aa14.69□□□□□ -0.06
TNC-213ENST00000544972 CSB-PGBD3P0DP91 1061 aa14.69□□□□□ -0.06
TNC-213ENST00000544972 AMOTQ4VCS5 1084 aa14.69□□□□□ -0.06
TNC-213ENST00000544972 PLEKHO1Q53GL0 409 aaPredicted RBP14.69□□□□□ -0.06
TNC-213ENST00000544972 TSPYL6Q8N831 410 aa14.69□□□□□ -0.06
TNC-213ENST00000544972 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.69□□□□□ -0.06
TNC-213ENST00000544972 BCL2L13Q9BXK5 485 aa14.68□□□□□ -0.06
TNC-213ENST00000544972 WDR17Q8IZU2 1322 aa14.68□□□□□ -0.06
TNC-213ENST00000544972 CEMIPQ8WUJ3 1361 aa14.67□□□□□ -0.06
TNC-213ENST00000544972 MEGF6O75095 1541 aa14.67□□□□□ -0.06
TNC-213ENST00000544972 VAMP4O75379 141 aa14.67□□□□□ -0.06
TNC-213ENST00000544972 PIP4K2BP78356 416 aa14.67□□□□□ -0.06
TNC-213ENST00000544972 AKAP4Q5JQC9 854 aa14.66□□□□□ -0.06
TNC-213ENST00000544972 C8orf58Q8NAV2 365 aa14.66□□□□□ -0.06
TNC-213ENST00000544972 SSH1Q8WYL5 1049 aa14.66□□□□□ -0.06
TNC-213ENST00000544972 CRBNQ96SW2 442 aa14.66□□□□□ -0.06
TNC-213ENST00000544972 ZNF530Q6P9A1 599 aaPredicted RBP14.66□□□□□ -0.06
TNC-213ENST00000544972 MIS18AQ9NYP9 233 aa14.66□□□□□ -0.06
TNC-213ENST00000544972 VIRMAQ69YN4 1812 aaKnown RBP14.65□□□□□ -0.06
TNC-213ENST00000544972 UBAP1LF5GYI3 381 aa14.65□□□□□ -0.06
TNC-213ENST00000544972 RAPGEF4Q8WZA2 1011 aa14.65□□□□□ -0.06
TNC-213ENST00000544972 ZNF428Q96B54 188 aa14.65□□□□□ -0.06
TNC-213ENST00000544972 LGR6Q9HBX8 967 aa14.65□□□□□ -0.06
TNC-213ENST00000544972 PLEKHG2Q9H7P9 1386 aa14.65□□□□□ -0.06
TNC-213ENST00000544972 ELL2O00472 640 aaPredicted RBP14.64□□□□□ -0.07
TNC-213ENST00000544972 PDE3AQ14432 1141 aa14.64□□□□□ -0.07
TNC-213ENST00000544972 KRT24Q2M2I5 525 aa14.64□□□□□ -0.07
TNC-213ENST00000544972 TWISTNBQ3B726 338 aaPredicted RBP14.64□□□□□ -0.07
TNC-213ENST00000544972 ALDH1L2Q3SY69 923 aa14.64□□□□□ -0.07
TNC-213ENST00000544972 B4GALNT3Q6L9W6 998 aa14.64□□□□□ -0.07
TNC-213ENST00000544972 FRAT1Q92837 279 aaPredicted RBP14.64□□□□□ -0.07
TNC-213ENST00000544972 SMC4Q9NTJ3 1288 aa14.64□□□□□ -0.07
TNC-213ENST00000544972 ADAMTS7Q9UKP4 1686 aa14.63□□□□□ -0.07
TNC-213ENST00000544972 COL14A1Q05707 1796 aaKnown RBP14.63□□□□□ -0.07
TNC-213ENST00000544972 TATP17735 454 aaPredicted RBP14.63□□□□□ -0.07
TNC-213ENST00000544972 TOM1L2Q6ZVM7 507 aa14.63□□□□□ -0.07
TNC-213ENST00000544972 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.63□□□□□ -0.07
TNC-213ENST00000544972 TSPYL4Q9UJ04 414 aa14.63□□□□□ -0.07
TNC-213ENST00000544972 PKD1L3Q7Z443 1732 aa14.63□□□□□ -0.07
TNC-213ENST00000544972 BRPF1P55201 1214 aaPredicted RBP14.62□□□□□ -0.07
TNC-213ENST00000544972 TAF7Q15545 349 aaPredicted RBP14.62□□□□□ -0.07
TNC-213ENST00000544972 LARP1Q6PKG0 1096 aaKnown RBP14.62□□□□□ -0.07
TNC-213ENST00000544972 MPRIPQ6WCQ1 1025 aa14.62□□□□□ -0.07
TNC-213ENST00000544972 TNNQ9UQP3 1299 aa14.62□□□□□ -0.07
TNC-213ENST00000544972 C1orf141Q5JVX7 400 aa14.62□□□□□ -0.07
TNC-213ENST00000544972 CARD10Q9BWT7 1032 aa14.62□□□□□ -0.07
TNC-213ENST00000544972 BABAM1Q9NWV8 329 aa14.62□□□□□ -0.07
TNC-213ENST00000544972 OVOS2A0A0G2JMS6 1433 aa14.61□□□□□ -0.07
TNC-213ENST00000544972 RNMTO43148 476 aaKnown RBP14.61□□□□□ -0.07
TNC-213ENST00000544972 CANXP27824 592 aaKnown RBP14.61□□□□□ -0.07
TNC-213ENST00000544972 CERKQ8TCT0 537 aa14.61□□□□□ -0.07
TNC-213ENST00000544972 STRN4Q9NRL3 753 aa14.61□□□□□ -0.07
TNC-213ENST00000544972 BTG4Q9NY30 223 aa14.61□□□□□ -0.07
TNC-213ENST00000544972 PARP4Q9UKK3 1724 aaKnown RBP14.6□□□□□ -0.07
TNC-213ENST00000544972 RLBP1P12271 317 aa14.6□□□□□ -0.07
TNC-213ENST00000544972 PANK1Q8TE04 598 aa14.6□□□□□ -0.07
TNC-213ENST00000544972 SPG7Q9UQ90 795 aa14.6□□□□□ -0.07
TNC-213ENST00000544972 PHKG2P15735 406 aa14.59□□□□□ -0.07
TNC-213ENST00000544972 EVA1CP58658 441 aa14.59□□□□□ -0.07
TNC-213ENST00000544972 ZKSCAN2Q63HK3 967 aa14.59□□□□□ -0.07
TNC-213ENST00000544972 MRPL50Q8N5N7 158 aaKnown RBP14.59□□□□□ -0.07
TNC-213ENST00000544972 NOB1Q9ULX3 412 aaKnown RBP14.59□□□□□ -0.07
TNC-213ENST00000544972 SIPA1L3O60292 1781 aaPredicted RBP14.59□□□□□ -0.07
TNC-213ENST00000544972 KDM3BQ7LBC6 1761 aa14.59□□□□□ -0.07
TNC-213ENST00000544972 SCN11AQ9UI33 1791 aa14.59□□□□□ -0.07
TNC-213ENST00000544972 KDM6AO15550 1401 aaPredicted RBP14.58□□□□□ -0.07
TNC-213ENST00000544972 KIF16BQ96L93 1317 aa14.58□□□□□ -0.08
TNC-213ENST00000544972 CYP27B1O15528 508 aa14.58□□□□□ -0.08
TNC-213ENST00000544972 TRIM27P14373 513 aa14.58□□□□□ -0.08
TNC-213ENST00000544972 CCDC136Q96JN2 1154 aa14.58□□□□□ -0.08
TNC-213ENST00000544972 ATF7IPQ6VMQ6 1270 aa14.57□□□□□ -0.08
TNC-213ENST00000544972 IFNL2Q8IZJ0 200 aa14.57□□□□□ -0.08
TNC-213ENST00000544972 COG6Q9Y2V7 657 aa14.57□□□□□ -0.08
TNC-213ENST00000544972 TCERG1O14776 1098 aaKnown RBP14.57□□□□□ -0.08
TNC-213ENST00000544972 CLUAP1Q96AJ1 413 aa14.57□□□□□ -0.08
TNC-213ENST00000544972 PLCH1Q4KWH8 1693 aa14.57□□□□□ -0.08
TNC-213ENST00000544972 SHANK3Q9BYB0 1731 aa14.56□□□□□ -0.08
TNC-213ENST00000544972 ADAMTS2O95450 1211 aa14.56□□□□□ -0.08
TNC-213ENST00000544972 IL2RBP14784 551 aa14.56□□□□□ -0.08
TNC-213ENST00000544972 TEFQ10587 303 aa14.56□□□□□ -0.08
TNC-213ENST00000544972 DZIP1LQ8IYY4 767 aaKnown RBP14.55□□□□□ -0.08
TNC-213ENST00000544972 NRAPQ86VF7 1730 aa14.55□□□□□ -0.08
TNC-213ENST00000544972 BTBD11A6QL63 1104 aa14.55□□□□□ -0.08
TNC-213ENST00000544972 IPO8O15397 1037 aaKnown RBP14.55□□□□□ -0.08
TNC-213ENST00000544972 KCNQ3O43525 872 aa14.55□□□□□ -0.08
TNC-213ENST00000544972 ZCRB1Q8TBF4 217 aaKnown RBP14.55□□□□□ -0.08
TNC-213ENST00000544972 ARHGAP45Q92619 1136 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms