RNA–Protein interactions for RNA: ENST00000544800.1

CIT-215, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-215ENST00000544800 AKAP12Q02952 1782 aa10.61□□□□□ -0.71
CIT-215ENST00000544800 NHSQ6T4R5 1651 aa10.6□□□□□ -0.71
CIT-215ENST00000544800 GCP02774 474 aa10.6□□□□□ -0.71
CIT-215ENST00000544800 KCNQ4P56696 695 aa10.6□□□□□ -0.71
CIT-215ENST00000544800 HABP4Q5JVS0 413 aaKnown RBP10.6□□□□□ -0.71
CIT-215ENST00000544800 PITPNM2Q9BZ72 1349 aa10.59□□□□□ -0.71
CIT-215ENST00000544800 MCOLN1Q9GZU1 580 aa10.59□□□□□ -0.71
CIT-215ENST00000544800 RNF181Q9P0P0 153 aa10.59□□□□□ -0.71
CIT-215ENST00000544800 WDR17Q8IZU2 1322 aa10.58□□□□□ -0.71
CIT-215ENST00000544800 YTHDC2Q9H6S0 1430 aaKnown RBP10.58□□□□□ -0.72
CIT-215ENST00000544800 TNRC6CQ9HCJ0 1690 aaKnown RBP10.58□□□□□ -0.72
CIT-215ENST00000544800 SAFB2Q14151 953 aaKnown RBP eCLIP10.58□□□□□ -0.72
CIT-215ENST00000544800 CARD10Q9BWT7 1032 aa10.58□□□□□ -0.72
CIT-215ENST00000544800 EIF3AQ14152 1382 aaKnown RBP10.57□□□□□ -0.72
CIT-215ENST00000544800 TGFB2P61812 414 aa10.57□□□□□ -0.72
CIT-215ENST00000544800 A0A0C4DFX4 3053 aa10.57□□□□□ -0.72
CIT-215ENST00000544800 ADGRF5Q8IZF2 1346 aa10.57□□□□□ -0.72
CIT-215ENST00000544800 PRR36Q9H6K5 1346 aa10.57□□□□□ -0.72
CIT-215ENST00000544800 TUBGCP6Q96RT7 1819 aa10.56□□□□□ -0.72
CIT-215ENST00000544800 KNDC1Q76NI1 1749 aa10.56□□□□□ -0.72
CIT-215ENST00000544800 TRPM1Q7Z4N2 1603 aa10.56□□□□□ -0.72
CIT-215ENST00000544800 FCHSD2O94868 740 aa10.56□□□□□ -0.72
CIT-215ENST00000544800 ABTB2Q8N961 1025 aa10.56□□□□□ -0.72
CIT-215ENST00000544800 PRAM1Q96QH2 718 aa10.56□□□□□ -0.72
CIT-215ENST00000544800 ZBTB7CA1YPR0 619 aa10.55□□□□□ -0.72
CIT-215ENST00000544800 GLTPD2A6NH11 291 aa10.55□□□□□ -0.72
CIT-215ENST00000544800 NLRP13Q86W25 1043 aa10.55□□□□□ -0.72
CIT-215ENST00000544800 BTAF1O14981 1849 aa10.55□□□□□ -0.72
CIT-215ENST00000544800 ZC3H4Q9UPT8 1303 aaKnown RBP10.55□□□□□ -0.72
CIT-215ENST00000544800 KIF1BO60333 1816 aa10.54□□□□□ -0.72
CIT-215ENST00000544800 A0A0G2JLW4 131 aa10.54□□□□□ -0.72
CIT-215ENST00000544800 HMGB2P26583 209 aaKnown RBP10.54□□□□□ -0.72
CIT-215ENST00000544800 CHADLQ6NUI6 762 aa10.54□□□□□ -0.72
CIT-215ENST00000544800 SLC17A8Q8NDX2 589 aa10.54□□□□□ -0.72
CIT-215ENST00000544800 BEGAINQ9BUH8 593 aa10.54□□□□□ -0.72
CIT-215ENST00000544800 POGKQ9P215 609 aa10.54□□□□□ -0.72
CIT-215ENST00000544800 CCNL1Q9UK58 526 aaPredicted RBP10.54□□□□□ -0.72
CIT-215ENST00000544800 VPS8Q8N3P4 1428 aa10.53□□□□□ -0.72
CIT-215ENST00000544800 PITPNM1O00562 1244 aa10.52□□□□□ -0.73
CIT-215ENST00000544800 AXIN2Q9Y2T1 843 aa10.52□□□□□ -0.73
CIT-215ENST00000544800 TMEM88BA6NKF7 163 aa10.51□□□□□ -0.73
CIT-215ENST00000544800 SOX10P56693 466 aa10.51□□□□□ -0.73
CIT-215ENST00000544800 PIP4P2Q8N4L2 257 aa10.51□□□□□ -0.73
CIT-215ENST00000544800 NBPF15Q8N660 670 aa10.51□□□□□ -0.73
CIT-215ENST00000544800 CCDC7Q96M83 1385 aa10.51□□□□□ -0.73
CIT-215ENST00000544800 COL18A1P39060 1754 aa10.5□□□□□ -0.73
CIT-215ENST00000544800 KAT6BQ8WYB5 2073 aa10.5□□□□□ -0.73
CIT-215ENST00000544800 WASLO00401 505 aaPredicted RBP10.5□□□□□ -0.73
CIT-215ENST00000544800 CSB-PGBD3P0DP91 1061 aa10.5□□□□□ -0.73
CIT-215ENST00000544800 FXR1P51114 621 aaKnown RBP eCLIP10.5□□□□□ -0.73
CIT-215ENST00000544800 DGKZQ13574 1117 aa10.5□□□□□ -0.73
CIT-215ENST00000544800 DEFB115Q30KQ5 88 aa10.5□□□□□ -0.73
CIT-215ENST00000544800 POTECB2RU33 542 aa10.49□□□□□ -0.73
CIT-215ENST00000544800 WDR33Q9C0J8 1336 aaKnown RBP10.49□□□□□ -0.73
CIT-215ENST00000544800 PKD1L3Q7Z443 1732 aa10.49□□□□□ -0.73
CIT-215ENST00000544800 VIRMAQ69YN4 1812 aaKnown RBP10.49□□□□□ -0.73
CIT-215ENST00000544800 WNK3Q9BYP7 1800 aa10.49□□□□□ -0.73
CIT-215ENST00000544800 PPLO60437 1756 aa10.48□□□□□ -0.73
CIT-215ENST00000544800 RASSF10A6NK89 507 aa10.48□□□□□ -0.73
CIT-215ENST00000544800 DPEP1P16444 411 aa10.48□□□□□ -0.73
CIT-215ENST00000544800 PASKQ96RG2 1323 aa10.48□□□□□ -0.73
CIT-215ENST00000544800 PPIP5K1Q6PFW1 1433 aa10.48□□□□□ -0.73
CIT-215ENST00000544800 SPATA31E1Q6ZUB1 1445 aa10.48□□□□□ -0.73
CIT-215ENST00000544800 ABCC6O95255 1503 aa10.48□□□□□ -0.73
CIT-215ENST00000544800 PIK3C2AO00443 1686 aa10.47□□□□□ -0.73
CIT-215ENST00000544800 DCAF5Q96JK2 942 aa10.47□□□□□ -0.73
CIT-215ENST00000544800 MKRN4PQ13434 485 aaPredicted RBP10.46□□□□□ -0.73
CIT-215ENST00000544800 SMIM5Q71RC9 77 aa10.46□□□□□ -0.73
CIT-215ENST00000544800 SYTL4Q96C24 671 aaPredicted RBP10.46□□□□□ -0.73
CIT-215ENST00000544800 ACEP12821 1306 aa10.45□□□□□ -0.74
CIT-215ENST00000544800 MINK1Q8N4C8 1332 aaPredicted RBP10.45□□□□□ -0.74
CIT-215ENST00000544800 PRIM1P49642 420 aaKnown RBP10.45□□□□□ -0.74
CIT-215ENST00000544800 FAM50AQ14320 339 aaKnown RBP10.45□□□□□ -0.74
CIT-215ENST00000544800 DPY19L2Q6NUT2 758 aa10.45□□□□□ -0.74
CIT-215ENST00000544800 NUDT16Q96DE0 195 aaKnown RBP10.45□□□□□ -0.74
CIT-215ENST00000544800 C14orf93Q9H972 538 aaKnown RBP10.45□□□□□ -0.74
CIT-215ENST00000544800 PIM2Q9P1W9 311 aa10.45□□□□□ -0.74
CIT-215ENST00000544800 POLR3AO14802 1390 aaPredicted RBP10.44□□□□□ -0.74
CIT-215ENST00000544800 ERBB3P21860 1342 aa10.44□□□□□ -0.74
CIT-215ENST00000544800 CA12O43570 354 aa10.44□□□□□ -0.74
CIT-215ENST00000544800 IL2RBP14784 551 aa10.44□□□□□ -0.74
CIT-215ENST00000544800 DALRD3Q5D0E6 543 aaKnown RBP10.44□□□□□ -0.74
CIT-215ENST00000544800 MMP10P09238 476 aa10.43□□□□□ -0.74
CIT-215ENST00000544800 KCNA3P22001 575 aa10.43□□□□□ -0.74
CIT-215ENST00000544800 TSKSQ9UJT2 592 aa10.43□□□□□ -0.74
CIT-215ENST00000544800 PIK3C2GO75747 1445 aa10.42□□□□□ -0.74
CIT-215ENST00000544800 ROCK1Q13464 1354 aa10.42□□□□□ -0.74
CIT-215ENST00000544800 SPDYE2BA6NHP3 402 aa10.42□□□□□ -0.74
CIT-215ENST00000544800 SPDYE6P0CI01 402 aa10.42□□□□□ -0.74
CIT-215ENST00000544800 LMNB1P20700 586 aa10.42□□□□□ -0.74
CIT-215ENST00000544800 SPDYE2Q495Y8 402 aa10.42□□□□□ -0.74
CIT-215ENST00000544800 ANKRD36BQ8N2N9 1353 aa10.41□□□□□ -0.74
CIT-215ENST00000544800 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.41□□□□□ -0.74
CIT-215ENST00000544800 POTEIP0CG38 1075 aa10.41□□□□□ -0.74
CIT-215ENST00000544800 POTEJP0CG39 1038 aa10.41□□□□□ -0.74
CIT-215ENST00000544800 NLRP6P59044 892 aa10.41□□□□□ -0.74
CIT-215ENST00000544800 AK7Q96M32 723 aa10.41□□□□□ -0.74
CIT-215ENST00000544800 KDM6AO15550 1401 aaPredicted RBP10.41□□□□□ -0.74
CIT-215ENST00000544800 USP47Q96K76 1375 aa10.4□□□□□ -0.74
CIT-215ENST00000544800 N4BP2Q86UW6 1770 aaPredicted RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms