RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 LIG1P18858 919 aa23.49■■□□□ 1.35
BPTF-208ENST00000544778 CWC27Q6UX04 472 aaKnown RBP23.49■■□□□ 1.35
BPTF-208ENST00000544778 TTC16Q8NEE8 873 aa23.49■■□□□ 1.35
BPTF-208ENST00000544778 CEP63Q96MT8 703 aa23.49■■□□□ 1.35
BPTF-208ENST00000544778 IDH1O75874 414 aaKnown RBP23.49■■□□□ 1.35
BPTF-208ENST00000544778 POLR3DP05423 398 aaPredicted RBP23.49■■□□□ 1.35
BPTF-208ENST00000544778 CA8P35219 290 aa23.49■■□□□ 1.35
BPTF-208ENST00000544778 CCDC150Q8NCX0 1101 aa23.49■■□□□ 1.35
BPTF-208ENST00000544778 EXOSC9Q06265 439 aaKnown RBP23.48■■□□□ 1.35
BPTF-208ENST00000544778 CFAP45Q9UL16 551 aa23.48■■□□□ 1.35
BPTF-208ENST00000544778 CCDC148Q8NFR7 591 aa23.48■■□□□ 1.35
BPTF-208ENST00000544778 BTBD11A6QL63 1104 aa23.48■■□□□ 1.35
BPTF-208ENST00000544778 PLCD3Q8N3E9 789 aa23.47■■□□□ 1.35
BPTF-208ENST00000544778 PDZRN3Q9UPQ7 1066 aa23.47■■□□□ 1.35
BPTF-208ENST00000544778 PDRG1Q9NUG6 133 aa23.47■■□□□ 1.35
BPTF-208ENST00000544778 CCDC178Q5BJE1 867 aa23.46■■□□□ 1.35
BPTF-208ENST00000544778 ZNF530Q6P9A1 599 aaPredicted RBP23.46■■□□□ 1.35
BPTF-208ENST00000544778 UBE4AQ14139 1066 aa23.46■■□□□ 1.35
BPTF-208ENST00000544778 CCT4P50991 539 aaKnown RBP23.46■■□□□ 1.35
BPTF-208ENST00000544778 SULT6B1Q6IMI4 303 aa23.46■■□□□ 1.35
BPTF-208ENST00000544778 BLOC1S2Q6QNY1 142 aa23.46■■□□□ 1.35
BPTF-208ENST00000544778 AAMPQ13685 434 aa23.45■■□□□ 1.35
BPTF-208ENST00000544778 CEP131Q9UPN4 1083 aa23.45■■□□□ 1.34
BPTF-208ENST00000544778 WDR33Q9C0J8 1336 aaKnown RBP23.45■■□□□ 1.34
BPTF-208ENST00000544778 JAKMIP1Q96N16 626 aaKnown RBP23.45■■□□□ 1.34
BPTF-208ENST00000544778 BCCIPQ9P287 314 aaKnown RBP eCLIP23.45■■□□□ 1.34
BPTF-208ENST00000544778 ANKIB1Q9P2G1 1089 aa23.45■■□□□ 1.34
BPTF-208ENST00000544778 GCC1Q96CN9 775 aa23.45■■□□□ 1.34
BPTF-208ENST00000544778 SLTMQ9NWH9 1034 aaKnown RBP eCLIP23.45■■□□□ 1.34
BPTF-208ENST00000544778 AIDAQ96BJ3 306 aa23.45■■□□□ 1.34
BPTF-208ENST00000544778 GSTTP1A0A1W2PQM5 241 aa23.44■■□□□ 1.34
BPTF-208ENST00000544778 ERICH4A6NGS2 130 aa23.44■■□□□ 1.34
BPTF-208ENST00000544778 FERMT2Q96AC1 680 aa23.44■■□□□ 1.34
BPTF-208ENST00000544778 UPF3BQ9BZI7 483 aaKnown RBP23.44■■□□□ 1.34
BPTF-208ENST00000544778 ADAMTS8Q9UP79 889 aa23.44■■□□□ 1.34
BPTF-208ENST00000544778 TNNT1P13805 278 aa23.44■■□□□ 1.34
BPTF-208ENST00000544778 MKNK2Q9HBH9 465 aa23.44■■□□□ 1.34
BPTF-208ENST00000544778 WASF1Q92558 559 aa23.44■■□□□ 1.34
BPTF-208ENST00000544778 MACROD2A1Z1Q3 448 aa23.44■■□□□ 1.34
BPTF-208ENST00000544778 MINDY4BA8MYZ0 360 aa23.44■■□□□ 1.34
BPTF-208ENST00000544778 BCAR3O75815 825 aa23.44■■□□□ 1.34
BPTF-208ENST00000544778 TCP11L2Q8N4U5 519 aa23.44■■□□□ 1.34
BPTF-208ENST00000544778 TSR2Q969E8 191 aaKnown RBP23.43■■□□□ 1.34
BPTF-208ENST00000544778 PUS7Q96PZ0 661 aaKnown RBP23.43■■□□□ 1.34
BPTF-208ENST00000544778 CTNNA3Q9UI47 895 aa23.43■■□□□ 1.34
BPTF-208ENST00000544778 TSG101Q99816 390 aa23.43■■□□□ 1.34
BPTF-208ENST00000544778 DNA2P51530 1060 aa23.42■■□□□ 1.34
BPTF-208ENST00000544778 HOMER2Q9NSB8 354 aa23.42■■□□□ 1.34
BPTF-208ENST00000544778 SPA17Q15506 151 aa23.42■■□□□ 1.34
BPTF-208ENST00000544778 DDX11Q96FC9 970 aa23.42■■□□□ 1.34
BPTF-208ENST00000544778 SMTNL1A8MU46 457 aa23.42■■□□□ 1.34
BPTF-208ENST00000544778 PRAM1Q96QH2 718 aa23.42■■□□□ 1.34
BPTF-208ENST00000544778 CEP126Q9P2H0 1117 aa23.42■■□□□ 1.34
BPTF-208ENST00000544778 ZPR1O75312 459 aa23.41■■□□□ 1.34
BPTF-208ENST00000544778 ARHGAP29Q52LW3 1261 aa23.41■■□□□ 1.34
BPTF-208ENST00000544778 LARP1Q6PKG0 1096 aaKnown RBP23.41■■□□□ 1.34
BPTF-208ENST00000544778 SRCIN1Q9C0H9 1055 aa23.41■■□□□ 1.34
BPTF-208ENST00000544778 FANCIQ9NVI1 1328 aa23.41■■□□□ 1.34
BPTF-208ENST00000544778 GIMAP7Q8NHV1 300 aa23.41■■□□□ 1.34
BPTF-208ENST00000544778 IMMTQ16891 758 aaKnown RBP23.41■■□□□ 1.34
BPTF-208ENST00000544778 CCDC96Q2M329 555 aa23.41■■□□□ 1.34
BPTF-208ENST00000544778 TRMT1LQ7Z2T5 733 aaKnown RBP23.41■■□□□ 1.34
BPTF-208ENST00000544778 CACNA2D4Q7Z3S7 1137 aa23.41■■□□□ 1.34
BPTF-208ENST00000544778 FILIP1Q7Z7B0 1213 aa23.41■■□□□ 1.34
BPTF-208ENST00000544778 CFAP100Q494V2 611 aa23.41■■□□□ 1.34
BPTF-208ENST00000544778 ZNF219Q9P2Y4 722 aaPredicted RBP23.41■■□□□ 1.34
BPTF-208ENST00000544778 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.4■■□□□ 1.34
BPTF-208ENST00000544778 ZNF287Q9HBT7 754 aa23.4■■□□□ 1.34
BPTF-208ENST00000544778 CTNNA2P26232 953 aa23.4■■□□□ 1.34
BPTF-208ENST00000544778 KLHL10Q6JEL2 608 aa23.4■■□□□ 1.34
BPTF-208ENST00000544778 METTL24Q5JXM2 366 aa23.39■■□□□ 1.34
BPTF-208ENST00000544778 SRGAP3O43295 1099 aa23.39■■□□□ 1.34
BPTF-208ENST00000544778 PNISRQ8TF01 805 aaKnown RBP23.39■■□□□ 1.34
BPTF-208ENST00000544778 CAMK4Q16566 473 aa23.39■■□□□ 1.34
BPTF-208ENST00000544778 HOOK3Q86VS8 718 aa23.39■■□□□ 1.34
BPTF-208ENST00000544778 XPCQ01831 940 aaPredicted RBP23.39■■□□□ 1.33
BPTF-208ENST00000544778 CUL5Q93034 780 aa23.39■■□□□ 1.33
BPTF-208ENST00000544778 NUP62CLQ9H1M0 184 aa23.39■■□□□ 1.33
BPTF-208ENST00000544778 PPM1EQ8WY54 764 aa23.39■■□□□ 1.33
BPTF-208ENST00000544778 IFFO1Q0D2I5 559 aa23.38■■□□□ 1.33
BPTF-208ENST00000544778 RRBP1Q9P2E9 1410 aaKnown RBP23.38■■□□□ 1.33
BPTF-208ENST00000544778 CAVIN4Q5BKX8 364 aa23.38■■□□□ 1.33
BPTF-208ENST00000544778 FKBP15Q5T1M5 1219 aa23.37■■□□□ 1.33
BPTF-208ENST00000544778 PABPN1LA6NDY0 278 aaKnown RBP23.37■■□□□ 1.33
BPTF-208ENST00000544778 UQCRHLA0A096LP55 91 aa23.37■■□□□ 1.33
BPTF-208ENST00000544778 UQCRHP07919 91 aa23.37■■□□□ 1.33
BPTF-208ENST00000544778 CASQ1P31415 396 aa23.37■■□□□ 1.33
BPTF-208ENST00000544778 PRDM11Q9NQV5 511 aa23.37■■□□□ 1.33
BPTF-208ENST00000544778 K7ELQ4 463 aaPredicted RBP23.37■■□□□ 1.33
BPTF-208ENST00000544778 CRACR2AQ9BSW2 395 aa23.37■■□□□ 1.33
BPTF-208ENST00000544778 CDK19Q9BWU1 502 aa23.37■■□□□ 1.33
BPTF-208ENST00000544778 CASTP20810 708 aaKnown RBP23.36■■□□□ 1.33
BPTF-208ENST00000544778 DZIP1Q86YF9 867 aaKnown RBP23.36■■□□□ 1.33
BPTF-208ENST00000544778 DDX23Q9BUQ8 820 aaKnown RBP23.36■■□□□ 1.33
BPTF-208ENST00000544778 TMCO3Q6UWJ1 677 aa23.36■■□□□ 1.33
BPTF-208ENST00000544778 ARHGAP5Q13017 1502 aa23.36■■□□□ 1.33
BPTF-208ENST00000544778 STARD3NLO95772 234 aa23.35■■□□□ 1.33
BPTF-208ENST00000544778 TICAM2Q86XR7 235 aa23.35■■□□□ 1.33
BPTF-208ENST00000544778 USP8P40818 1118 aa23.35■■□□□ 1.33
BPTF-208ENST00000544778 ZNF652Q9Y2D9 606 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms