RNA–Protein interactions for RNA: ENST00000544596.5

ABCA13-207, Transcript of ATP binding cassette subfamily A member 13, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene ABCA13, Length 7,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-207ENST00000544596 SPATA24Q86W54 205 aa9.51□□□□□ -0.89
ABCA13-207ENST00000544596 PUF60Q9UHX1 559 aaKnown RBP9.51□□□□□ -0.89
ABCA13-207ENST00000544596 FAM69CQ0P6D2 419 aa9.5□□□□□ -0.89
ABCA13-207ENST00000544596 FILIP1Q7Z7B0 1213 aa9.5□□□□□ -0.89
ABCA13-207ENST00000544596 IGHMBP2P38935 993 aaKnown RBP9.5□□□□□ -0.89
ABCA13-207ENST00000544596 CACNA2D4Q7Z3S7 1137 aa9.5□□□□□ -0.89
ABCA13-207ENST00000544596 MKNK2Q9HBH9 465 aa9.5□□□□□ -0.89
ABCA13-207ENST00000544596 ZWINTO95229 277 aa9.5□□□□□ -0.89
ABCA13-207ENST00000544596 LARP1BQ659C4 914 aaKnown RBP9.5□□□□□ -0.89
ABCA13-207ENST00000544596 SPTY2D1Q68D10 685 aaPredicted RBP9.5□□□□□ -0.89
ABCA13-207ENST00000544596 GAS2L2Q8NHY3 880 aa9.5□□□□□ -0.89
ABCA13-207ENST00000544596 MINDY4BA8MYZ0 360 aa9.5□□□□□ -0.89
ABCA13-207ENST00000544596 MBD3O95983 291 aa9.5□□□□□ -0.89
ABCA13-207ENST00000544596 USP8P40818 1118 aa9.5□□□□□ -0.89
ABCA13-207ENST00000544596 LMAN1P49257 510 aa9.5□□□□□ -0.89
ABCA13-207ENST00000544596 CCDC148Q8NFR7 591 aa9.5□□□□□ -0.89
ABCA13-207ENST00000544596 ANKIB1Q9P2G1 1089 aa9.5□□□□□ -0.89
ABCA13-207ENST00000544596 GNAI2P04899 355 aa9.49□□□□□ -0.89
ABCA13-207ENST00000544596 MRE11P49959 708 aa9.49□□□□□ -0.89
ABCA13-207ENST00000544596 SPA17Q15506 151 aa9.49□□□□□ -0.89
ABCA13-207ENST00000544596 HDGFL1Q5TGJ6 251 aa9.49□□□□□ -0.89
ABCA13-207ENST00000544596 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.49□□□□□ -0.89
ABCA13-207ENST00000544596 TRAK2O60296 914 aa9.49□□□□□ -0.89
ABCA13-207ENST00000544596 CDKL5O76039 1030 aa9.49□□□□□ -0.89
ABCA13-207ENST00000544596 KLHL10Q6JEL2 608 aa9.49□□□□□ -0.89
ABCA13-207ENST00000544596 ANKRD18BA2A2Z9 1011 aa9.49□□□□□ -0.89
ABCA13-207ENST00000544596 TMCO3Q6UWJ1 677 aa9.49□□□□□ -0.89
ABCA13-207ENST00000544596 LUZP1Q86V48 1076 aa9.49□□□□□ -0.89
ABCA13-207ENST00000544596 ZMYND15Q9H091 742 aa9.49□□□□□ -0.89
ABCA13-207ENST00000544596 FMN1Q68DA7 1419 aa9.49□□□□□ -0.89
ABCA13-207ENST00000544596 SMG6Q86US8 1419 aaKnown RBP9.49□□□□□ -0.89
ABCA13-207ENST00000544596 APBB1IPQ7Z5R6 666 aaPredicted RBP9.49□□□□□ -0.89
ABCA13-207ENST00000544596 RAB3IL1Q8TBN0 382 aa9.48□□□□□ -0.89
ABCA13-207ENST00000544596 CUL5Q93034 780 aa9.48□□□□□ -0.89
ABCA13-207ENST00000544596 TSNARE1Q96NA8 513 aa9.48□□□□□ -0.89
ABCA13-207ENST00000544596 CRACR2AQ9BSW2 395 aa9.48□□□□□ -0.89
ABCA13-207ENST00000544596 MTHFSP49914 203 aa9.48□□□□□ -0.89
ABCA13-207ENST00000544596 AACSQ86V21 672 aa9.48□□□□□ -0.89
ABCA13-207ENST00000544596 AIDAQ96BJ3 306 aa9.48□□□□□ -0.89
ABCA13-207ENST00000544596 FEZ1Q99689 392 aa9.48□□□□□ -0.89
ABCA13-207ENST00000544596 ANKRD1Q15327 319 aa9.48□□□□□ -0.89
ABCA13-207ENST00000544596 TSG101Q99816 390 aa9.48□□□□□ -0.89
ABCA13-207ENST00000544596 BMS1Q14692 1282 aaKnown RBP9.48□□□□□ -0.89
ABCA13-207ENST00000544596 LRSAM1Q6UWE0 723 aa9.48□□□□□ -0.89
ABCA13-207ENST00000544596 SLC4A2P04920 1241 aa9.48□□□□□ -0.89
ABCA13-207ENST00000544596 CFAP100Q494V2 611 aa9.48□□□□□ -0.89
ABCA13-207ENST00000544596 UPF3BQ9BZI7 483 aaKnown RBP9.48□□□□□ -0.89
ABCA13-207ENST00000544596 KRT85P78386 507 aa9.48□□□□□ -0.89
ABCA13-207ENST00000544596 MTERF4Q7Z6M4 381 aaKnown RBP9.48□□□□□ -0.89
ABCA13-207ENST00000544596 SPATA32Q96LK8 384 aa9.48□□□□□ -0.89
ABCA13-207ENST00000544596 OTUD6BQ8N6M0 293 aa9.47□□□□□ -0.89
ABCA13-207ENST00000544596 DDX11Q96FC9 970 aa9.47□□□□□ -0.89
ABCA13-207ENST00000544596 CEP126Q9P2H0 1117 aa9.47□□□□□ -0.89
ABCA13-207ENST00000544596 ZPR1O75312 459 aa9.47□□□□□ -0.89
ABCA13-207ENST00000544596 TMEM132EQ6IEE7 984 aa9.47□□□□□ -0.89
ABCA13-207ENST00000544596 TDRD9Q8NDG6 1382 aaKnown RBP9.47□□□□□ -0.89
ABCA13-207ENST00000544596 SPECC1Q5M775 1068 aa9.47□□□□□ -0.89
ABCA13-207ENST00000544596 CCDC82Q8N4S0 544 aa9.47□□□□□ -0.89
ABCA13-207ENST00000544596 BAZ1AQ9NRL2 1556 aaPredicted RBP9.47□□□□□ -0.89
ABCA13-207ENST00000544596 VPS36Q86VN1 386 aa9.47□□□□□ -0.89
ABCA13-207ENST00000544596 AEBP1Q8IUX7 1158 aa9.47□□□□□ -0.89
ABCA13-207ENST00000544596 SPG7Q9UQ90 795 aa9.47□□□□□ -0.89
ABCA13-207ENST00000544596 PRPF4BQ13523 1007 aaKnown RBP9.46□□□□□ -0.89
ABCA13-207ENST00000544596 FKBP15Q5T1M5 1219 aa9.46□□□□□ -0.89
ABCA13-207ENST00000544596 RNF187Q5TA31 235 aaPredicted RBP9.46□□□□□ -0.89
ABCA13-207ENST00000544596 TMX1Q9H3N1 280 aa9.46□□□□□ -0.89
ABCA13-207ENST00000544596 SAMM50Q9Y512 469 aa9.46□□□□□ -0.89
ABCA13-207ENST00000544596 GCOM1H8Y6P7 765 aaPredicted RBP9.46□□□□□ -0.89
ABCA13-207ENST00000544596 MYZAPP0CAP1 466 aa9.46□□□□□ -0.89
ABCA13-207ENST00000544596 ZNF530Q6P9A1 599 aaPredicted RBP9.46□□□□□ -0.89
ABCA13-207ENST00000544596 PRDM11Q9NQV5 511 aa9.46□□□□□ -0.89
ABCA13-207ENST00000544596 TDRD12Q587J7 1177 aaKnown RBP9.46□□□□□ -0.89
ABCA13-207ENST00000544596 PPP1R14CQ8TAE6 165 aa9.46□□□□□ -0.89
ABCA13-207ENST00000544596 MCM2P49736 904 aa9.46□□□□□ -0.9
ABCA13-207ENST00000544596 RBM25P49756 843 aaKnown RBP9.46□□□□□ -0.9
ABCA13-207ENST00000544596 BLOC1S2Q6QNY1 142 aa9.46□□□□□ -0.9
ABCA13-207ENST00000544596 CWC27Q6UX04 472 aaKnown RBP9.46□□□□□ -0.9
ABCA13-207ENST00000544596 SHTN1A0MZ66 631 aa9.46□□□□□ -0.9
ABCA13-207ENST00000544596 SH3BP5O60239 455 aa9.46□□□□□ -0.9
ABCA13-207ENST00000544596 TIGD1Q96MW7 591 aa9.46□□□□□ -0.9
ABCA13-207ENST00000544596 ZNF287Q9HBT7 754 aa9.46□□□□□ -0.9
ABCA13-207ENST00000544596 IMMTQ16891 758 aaKnown RBP9.46□□□□□ -0.9
ABCA13-207ENST00000544596 GIGYF2Q6Y7W6 1299 aaKnown RBP9.46□□□□□ -0.9
ABCA13-207ENST00000544596 DZIP1Q86YF9 867 aaKnown RBP9.46□□□□□ -0.9
ABCA13-207ENST00000544596 KIF20AO95235 890 aa9.45□□□□□ -0.9
ABCA13-207ENST00000544596 XPCQ01831 940 aaPredicted RBP9.45□□□□□ -0.9
ABCA13-207ENST00000544596 TWISTNBQ3B726 338 aaPredicted RBP9.45□□□□□ -0.9
ABCA13-207ENST00000544596 DHX57Q6P158 1386 aaKnown RBP9.45□□□□□ -0.9
ABCA13-207ENST00000544596 JAKMIP1Q96N16 626 aaKnown RBP9.45□□□□□ -0.9
ABCA13-207ENST00000544596 CEP131Q9UPN4 1083 aa9.45□□□□□ -0.9
ABCA13-207ENST00000544596 METTL24Q5JXM2 366 aa9.45□□□□□ -0.9
ABCA13-207ENST00000544596 TCERG1LQ5VWI1 586 aa9.45□□□□□ -0.9
ABCA13-207ENST00000544596 WASF1Q92558 559 aa9.45□□□□□ -0.9
ABCA13-207ENST00000544596 MMRN2Q9H8L6 949 aa9.45□□□□□ -0.9
ABCA13-207ENST00000544596 NDC80O14777 642 aa9.45□□□□□ -0.9
ABCA13-207ENST00000544596 PRKAR2BP31323 418 aa9.45□□□□□ -0.9
ABCA13-207ENST00000544596 TXNDC2Q86VQ3 553 aa9.45□□□□□ -0.9
ABCA13-207ENST00000544596 CFAP57Q96MR6 1250 aa9.45□□□□□ -0.9
ABCA13-207ENST00000544596 CLEC11AQ9Y240 323 aa9.45□□□□□ -0.9
ABCA13-207ENST00000544596 MIA2Q96PC5 1412 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms