RNA–Protein interactions for RNA: ENST00000544381.3

MDH1-216, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-216ENST00000544381 ANKRD36BQ8N2N9 1353 aa13.54□□□□□ -0.24
MDH1-216ENST00000544381 NUTM2FA1L443 756 aa13.54□□□□□ -0.24
MDH1-216ENST00000544381 ST18O60284 1047 aa13.54□□□□□ -0.24
MDH1-216ENST00000544381 NLRP13Q86W25 1043 aa13.54□□□□□ -0.24
MDH1-216ENST00000544381 UNC5CLQ8IV45 518 aa13.54□□□□□ -0.24
MDH1-216ENST00000544381 TERF2IPQ9NYB0 399 aa13.54□□□□□ -0.24
MDH1-216ENST00000544381 BRD4O60885 1362 aaPredicted RBP13.54□□□□□ -0.24
MDH1-216ENST00000544381 TRPM3Q9HCF6 1732 aaPredicted RBP13.53□□□□□ -0.24
MDH1-216ENST00000544381 NSD3Q9BZ95 1437 aa13.53□□□□□ -0.24
MDH1-216ENST00000544381 CRYBG1Q9Y4K1 1723 aa13.52□□□□□ -0.25
MDH1-216ENST00000544381 HDGFL2Q7Z4V5 671 aaPredicted RBP13.52□□□□□ -0.25
MDH1-216ENST00000544381 FAM9BQ8IZU0 186 aa13.52□□□□□ -0.25
MDH1-216ENST00000544381 TNS3Q68CZ2 1445 aa13.52□□□□□ -0.25
MDH1-216ENST00000544381 CGNL1Q0VF96 1302 aa13.51□□□□□ -0.25
MDH1-216ENST00000544381 ONECUT3O60422 494 aaPredicted RBP13.5□□□□□ -0.25
MDH1-216ENST00000544381 CABP1Q9NZU7 370 aa13.5□□□□□ -0.25
MDH1-216ENST00000544381 ADGRB2O60241 1585 aa13.5□□□□□ -0.25
MDH1-216ENST00000544381 TNS1Q9HBL0 1735 aaKnown RBP13.5□□□□□ -0.25
MDH1-216ENST00000544381 ALS2Q96Q42 1657 aa13.49□□□□□ -0.25
MDH1-216ENST00000544381 SEPT12Q8IYM1 358 aa13.49□□□□□ -0.25
MDH1-216ENST00000544381 NUDT16Q96DE0 195 aaKnown RBP13.49□□□□□ -0.25
MDH1-216ENST00000544381 A0A1W2PP64 1363 aa13.48□□□□□ -0.25
MDH1-216ENST00000544381 VPS72Q15906 364 aa13.48□□□□□ -0.25
MDH1-216ENST00000544381 TMEM92Q6UXU6 159 aa13.48□□□□□ -0.25
MDH1-216ENST00000544381 CABLES1Q8TDN4 633 aa13.48□□□□□ -0.25
MDH1-216ENST00000544381 PPIP5K1Q6PFW1 1433 aa13.47□□□□□ -0.25
MDH1-216ENST00000544381 PPP2R1AP30153 589 aa13.47□□□□□ -0.25
MDH1-216ENST00000544381 KRT28Q7Z3Y7 464 aa13.47□□□□□ -0.25
MDH1-216ENST00000544381 MORC1Q86VD1 984 aa13.47□□□□□ -0.25
MDH1-216ENST00000544381 THSD7AQ9UPZ6 1657 aa13.47□□□□□ -0.25
MDH1-216ENST00000544381 ATP7BP35670 1465 aa13.47□□□□□ -0.25
MDH1-216ENST00000544381 NSD2O96028 1365 aa13.46□□□□□ -0.25
MDH1-216ENST00000544381 HNRNPUQ00839 825 aaKnown RBP eCLIP13.46□□□□□ -0.25
MDH1-216ENST00000544381 PNISRQ8TF01 805 aaKnown RBP13.46□□□□□ -0.25
MDH1-216ENST00000544381 CD163L1Q9NR16 1453 aa13.46□□□□□ -0.25
MDH1-216ENST00000544381 RGPD1P0DJD0 1748 aa13.46□□□□□ -0.26
MDH1-216ENST00000544381 SBNO1A3KN83 1393 aa13.46□□□□□ -0.26
MDH1-216ENST00000544381 PPP1R37O75864 691 aa13.44□□□□□ -0.26
MDH1-216ENST00000544381 COL14A1Q05707 1796 aaKnown RBP13.44□□□□□ -0.26
MDH1-216ENST00000544381 PRR36Q9H6K5 1346 aa13.44□□□□□ -0.26
MDH1-216ENST00000544381 FAM83GA6ND36 823 aa13.43□□□□□ -0.26
MDH1-216ENST00000544381 PSDA5PKW4 1024 aaPredicted RBP13.42□□□□□ -0.26
MDH1-216ENST00000544381 NKX1-1Q15270 411 aaPredicted RBP13.42□□□□□ -0.26
MDH1-216ENST00000544381 KRT27Q7Z3Y8 459 aa13.42□□□□□ -0.26
MDH1-216ENST00000544381 ITSN1Q15811 1721 aa13.42□□□□□ -0.26
MDH1-216ENST00000544381 DISP2A7MBM2 1401 aa13.41□□□□□ -0.26
MDH1-216ENST00000544381 HOXB3P14651 431 aaPredicted RBP13.41□□□□□ -0.26
MDH1-216ENST00000544381 CPSF1Q10570 1443 aaKnown RBP13.41□□□□□ -0.26
MDH1-216ENST00000544381 EDC4Q6P2E9 1401 aaKnown RBP13.41□□□□□ -0.26
MDH1-216ENST00000544381 ANKARQ7Z5J8 1434 aa13.41□□□□□ -0.26
MDH1-216ENST00000544381 KIF20BQ96Q89 1820 aa13.41□□□□□ -0.26
MDH1-216ENST00000544381 PLEKHG3A1L390 1219 aa13.4□□□□□ -0.26
MDH1-216ENST00000544381 FYB1O15117 783 aa13.4□□□□□ -0.26
MDH1-216ENST00000544381 TNNT2P45379 298 aaPredicted RBP13.4□□□□□ -0.26
MDH1-216ENST00000544381 DOK7Q18PE1 504 aa13.4□□□□□ -0.26
MDH1-216ENST00000544381 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.4□□□□□ -0.26
MDH1-216ENST00000544381 GGNBP2Q9H3C7 697 aa13.4□□□□□ -0.26
MDH1-216ENST00000544381 AKAP12Q02952 1782 aa13.4□□□□□ -0.26
MDH1-216ENST00000544381 ARHGEF10O15013 1369 aa13.4□□□□□ -0.26
MDH1-216ENST00000544381 TOPAZ1Q8N9V7 1692 aa13.4□□□□□ -0.26
MDH1-216ENST00000544381 WDR43Q15061 677 aaKnown RBP eCLIP13.39□□□□□ -0.27
MDH1-216ENST00000544381 RYDENQ9NUL5 291 aaKnown RBP13.39□□□□□ -0.27
MDH1-216ENST00000544381 ANKRD26Q9UPS8 1709 aa13.39□□□□□ -0.27
MDH1-216ENST00000544381 RREB1Q92766 1687 aa13.39□□□□□ -0.27
MDH1-216ENST00000544381 MON2Q7Z3U7 1717 aa13.39□□□□□ -0.27
MDH1-216ENST00000544381 ACEP12821 1306 aa13.38□□□□□ -0.27
MDH1-216ENST00000544381 PHRF1Q9P1Y6 1649 aaKnown RBP13.38□□□□□ -0.27
MDH1-216ENST00000544381 FAM98CQ17RN3 349 aaKnown RBP13.38□□□□□ -0.27
MDH1-216ENST00000544381 FAM182BQ5T319 152 aa13.38□□□□□ -0.27
MDH1-216ENST00000544381 ZNF710Q8N1W2 664 aa13.38□□□□□ -0.27
MDH1-216ENST00000544381 MARVELD3Q96A59 401 aa13.38□□□□□ -0.27
MDH1-216ENST00000544381 CFAP53Q96M91 514 aa13.38□□□□□ -0.27
MDH1-216ENST00000544381 PCDH10Q9P2E7 1040 aa13.38□□□□□ -0.27
MDH1-216ENST00000544381 EN1Q05925 392 aaPredicted RBP13.37□□□□□ -0.27
MDH1-216ENST00000544381 NGDNQ8NEJ9 315 aaKnown RBP13.37□□□□□ -0.27
MDH1-216ENST00000544381 PMFBP1Q8TBY8 1022 aa13.37□□□□□ -0.27
MDH1-216ENST00000544381 NUP188Q5SRE5 1749 aa13.36□□□□□ -0.27
MDH1-216ENST00000544381 SPATA31A5Q5VU36 1347 aa13.36□□□□□ -0.27
MDH1-216ENST00000544381 SPATA31A7Q8IWB4 1347 aa13.36□□□□□ -0.27
MDH1-216ENST00000544381 POLR3AO14802 1390 aaPredicted RBP13.36□□□□□ -0.27
MDH1-216ENST00000544381 INSRP06213 1382 aa13.36□□□□□ -0.27
MDH1-216ENST00000544381 MTHFSP49914 203 aa13.36□□□□□ -0.27
MDH1-216ENST00000544381 PSME1Q06323 249 aa13.36□□□□□ -0.27
MDH1-216ENST00000544381 SF3B2Q13435 895 aaKnown RBP13.36□□□□□ -0.27
MDH1-216ENST00000544381 RTN4Q9NQC3 1192 aaKnown RBP13.36□□□□□ -0.27
MDH1-216ENST00000544381 BTG4Q9NY30 223 aa13.36□□□□□ -0.27
MDH1-216ENST00000544381 CCDC9Q9Y3X0 531 aaKnown RBP13.36□□□□□ -0.27
MDH1-216ENST00000544381 ZBED9Q6R2W3 1325 aa13.35□□□□□ -0.27
MDH1-216ENST00000544381 BAG6P46379 1132 aa13.35□□□□□ -0.27
MDH1-216ENST00000544381 HAP1P54257 671 aaPredicted RBP13.35□□□□□ -0.27
MDH1-216ENST00000544381 RIMBP2O15034 1052 aa13.34□□□□□ -0.27
MDH1-216ENST00000544381 NME9Q86XW9 330 aa13.34□□□□□ -0.27
MDH1-216ENST00000544381 COG3Q96JB2 828 aa13.34□□□□□ -0.27
MDH1-216ENST00000544381 ADAMTS8Q9UP79 889 aa13.34□□□□□ -0.27
MDH1-216ENST00000544381 USP6P35125 1406 aa13.34□□□□□ -0.27
MDH1-216ENST00000544381 TTC21BQ7Z4L5 1316 aa13.33□□□□□ -0.27
MDH1-216ENST00000544381 C2orf72A6NCS6 295 aa13.33□□□□□ -0.28
MDH1-216ENST00000544381 R3HDM1Q15032 1099 aaKnown RBP13.33□□□□□ -0.28
MDH1-216ENST00000544381 LMOD2Q6P5Q4 547 aa13.33□□□□□ -0.28
MDH1-216ENST00000544381 TMC2Q8TDI7 906 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms