RNA–Protein interactions for RNA: ENST00000544151.1

LDHB-210, Transcript of lactate dehydrogenase B, humanhuman

TSL 2

Gene LDHB, Length 544 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-210ENST00000544151 USHBP1Q8N6Y0 703 aa21.57■■□□□ 1.04
LDHB-210ENST00000544151 ACSBG1Q96GR2 724 aa21.57■■□□□ 1.04
LDHB-210ENST00000544151 PLSCR1O15162 318 aa21.55■■□□□ 1.04
LDHB-210ENST00000544151 NBPF6Q5VWK0 638 aa21.55■■□□□ 1.04
LDHB-210ENST00000544151 NBPF4Q96M43 638 aa21.55■■□□□ 1.04
LDHB-210ENST00000544151 PANK3Q9H999 370 aa21.55■■□□□ 1.04
LDHB-210ENST00000544151 PPM1GO15355 546 aaPredicted RBP21.54■■□□□ 1.04
LDHB-210ENST00000544151 KCNQ2O43526 872 aa21.54■■□□□ 1.04
LDHB-210ENST00000544151 PKD1L3Q7Z443 1732 aa21.53■■□□□ 1.04
LDHB-210ENST00000544151 NBPF14Q5TI25 921 aa21.53■■□□□ 1.04
LDHB-210ENST00000544151 DDX54Q8TDD1 881 aaKnown RBP21.53■■□□□ 1.04
LDHB-210ENST00000544151 NSD2O96028 1365 aa21.52■■□□□ 1.04
LDHB-210ENST00000544151 TNNT2P45379 298 aaPredicted RBP21.51■■□□□ 1.03
LDHB-210ENST00000544151 KIF7Q2M1P5 1343 aa21.51■■□□□ 1.03
LDHB-210ENST00000544151 RAPGEF4Q8WZA2 1011 aa21.5■■□□□ 1.03
LDHB-210ENST00000544151 NPM3O75607 178 aaKnown RBP21.49■■□□□ 1.03
LDHB-210ENST00000544151 ZCRB1Q8TBF4 217 aaKnown RBP21.49■■□□□ 1.03
LDHB-210ENST00000544151 CASZ1Q86V15 1759 aa21.48■■□□□ 1.03
LDHB-210ENST00000544151 PAPPAQ13219 1627 aa21.48■■□□□ 1.03
LDHB-210ENST00000544151 TATP17735 454 aaPredicted RBP21.48■■□□□ 1.03
LDHB-210ENST00000544151 ANO8Q9HCE9 1232 aaPredicted RBP21.48■■□□□ 1.03
LDHB-210ENST00000544151 WASHC2AQ641Q2 1341 aa21.48■■□□□ 1.03
LDHB-210ENST00000544151 NCAPD2Q15021 1401 aa21.47■■□□□ 1.03
LDHB-210ENST00000544151 TXNRD1Q16881 649 aa21.47■■□□□ 1.03
LDHB-210ENST00000544151 POLKQ9UBT6 870 aa21.47■■□□□ 1.03
LDHB-210ENST00000544151 TOGARAM1Q9Y4F4 1720 aa21.46■■□□□ 1.03
LDHB-210ENST00000544151 PROM2Q8N271 834 aa21.46■■□□□ 1.03
LDHB-210ENST00000544151 LY75O60449 1722 aa21.46■■□□□ 1.03
LDHB-210ENST00000544151 SYTL4Q96C24 671 aaPredicted RBP21.45■■□□□ 1.02
LDHB-210ENST00000544151 KNSTRNQ9Y448 316 aa21.45■■□□□ 1.02
LDHB-210ENST00000544151 PCDH11XQ9BZA7 1347 aa21.44■■□□□ 1.02
LDHB-210ENST00000544151 PCDH11YQ9BZA8 1340 aa21.44■■□□□ 1.02
LDHB-210ENST00000544151 ITGB4P16144 1822 aa21.43■■□□□ 1.02
LDHB-210ENST00000544151 MORC1Q86VD1 984 aa21.42■■□□□ 1.02
LDHB-210ENST00000544151 PRIM1P49642 420 aaKnown RBP21.4■■□□□ 1.02
LDHB-210ENST00000544151 EIF4A2Q14240 407 aaKnown RBP21.4■■□□□ 1.02
LDHB-210ENST00000544151 EYA1Q99502 592 aa21.4■■□□□ 1.02
LDHB-210ENST00000544151 STK32BQ9NY57 414 aa21.4■■□□□ 1.02
LDHB-210ENST00000544151 TUBGCP6Q96RT7 1819 aa21.4■■□□□ 1.02
LDHB-210ENST00000544151 QSER1Q2KHR3 1735 aa21.38■■□□□ 1.01
LDHB-210ENST00000544151 AMER1Q5JTC6 1135 aaPredicted RBP21.37■■□□□ 1.01
LDHB-210ENST00000544151 SLC15A2Q16348 729 aa21.36■■□□□ 1.01
LDHB-210ENST00000544151 IGSF1Q8N6C5 1336 aa21.35■■□□□ 1.01
LDHB-210ENST00000544151 C5P01031 1676 aa21.35■■□□□ 1.01
LDHB-210ENST00000544151 CYP27B1O15528 508 aa21.35■■□□□ 1.01
LDHB-210ENST00000544151 LRRC4BQ9NT99 713 aa21.34■■□□□ 1.01
LDHB-210ENST00000544151 SPG7Q9UQ90 795 aa21.34■■□□□ 1.01
LDHB-210ENST00000544151 PDGFDQ9GZP0 370 aaPredicted RBP21.33■■□□□ 1.01
LDHB-210ENST00000544151 SPON1Q9HCB6 807 aa21.33■■□□□ 1.01
LDHB-210ENST00000544151 TAF1LQ8IZX4 1826 aa21.33■■□□□ 1.01
LDHB-210ENST00000544151 SLC27A3Q5K4L6 730 aa21.32■■□□□ 1
LDHB-210ENST00000544151 ZNF827Q17R98 1081 aa21.31■■□□□ 1
LDHB-210ENST00000544151 CC2D1BQ5T0F9 858 aaKnown RBP21.31■■□□□ 1
LDHB-210ENST00000544151 PLEKHG2Q9H7P9 1386 aa21.31■■□□□ 1
LDHB-210ENST00000544151 PER1O15534 1290 aaPredicted RBP21.3■■□□□ 1
LDHB-210ENST00000544151 ZBTB7AO95365 584 aa21.29■■□□□ 1
LDHB-210ENST00000544151 KCNQ4P56696 695 aa21.29■■□□□ 1
LDHB-210ENST00000544151 MPRIPQ6WCQ1 1025 aa21.29■■□□□ 1
LDHB-210ENST00000544151 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.29■■□□□ 1
LDHB-210ENST00000544151 PPP1R1BQ9UD71 204 aaPredicted RBP21.29■■□□□ 1
LDHB-210ENST00000544151 PALLDQ8WX93 1383 aa21.28■■□□□ 1
LDHB-210ENST00000544151 CCNL1Q9UK58 526 aaPredicted RBP21.28■■□□□ 1
LDHB-210ENST00000544151 CNGB1Q14028 1251 aaPredicted RBP21.27■■□□□ 1
LDHB-210ENST00000544151 PHKG2P15735 406 aa21.26■□□□□ 0.99
LDHB-210ENST00000544151 IFNL2Q8IZJ0 200 aa21.26■□□□□ 0.99
LDHB-210ENST00000544151 VIRMAQ69YN4 1812 aaKnown RBP21.26■□□□□ 0.99
LDHB-210ENST00000544151 NPC1L1Q9UHC9 1359 aa21.25■□□□□ 0.99
LDHB-210ENST00000544151 NKX1-1Q15270 411 aaPredicted RBP21.25■□□□□ 0.99
LDHB-210ENST00000544151 AEBP1Q8IUX7 1158 aa21.25■□□□□ 0.99
LDHB-210ENST00000544151 AKT1S1Q96B36 256 aa21.25■□□□□ 0.99
LDHB-210ENST00000544151 ATF5Q9Y2D1 282 aaPredicted RBP21.24■□□□□ 0.99
LDHB-210ENST00000544151 C4BP0C0L5 1744 aa21.24■□□□□ 0.99
LDHB-210ENST00000544151 KDRP35968 1356 aa21.23■□□□□ 0.99
LDHB-210ENST00000544151 MTHFSP49914 203 aa21.23■□□□□ 0.99
LDHB-210ENST00000544151 MTFR1LQ9H019 292 aa21.23■□□□□ 0.99
LDHB-210ENST00000544151 IL13P35225 146 aa21.22■□□□□ 0.99
LDHB-210ENST00000544151 SULT6B1Q6IMI4 303 aa21.22■□□□□ 0.99
LDHB-210ENST00000544151 TMOD3Q9NYL9 352 aa21.22■□□□□ 0.99
LDHB-210ENST00000544151 SCN11AQ9UI33 1791 aa21.21■□□□□ 0.99
LDHB-210ENST00000544151 PIGBQ92521 554 aa21.21■□□□□ 0.99
LDHB-210ENST00000544151 TFCP2L1Q9NZI6 479 aa21.21■□□□□ 0.99
LDHB-210ENST00000544151 PNPLA7Q6ZV29 1317 aa21.21■□□□□ 0.99
LDHB-210ENST00000544151 COL24A1Q17RW2 1714 aa21.21■□□□□ 0.99
LDHB-210ENST00000544151 COL3A1P02461 1466 aaPredicted RBP21.2■□□□□ 0.98
LDHB-210ENST00000544151 PTGER2P43116 358 aa21.2■□□□□ 0.98
LDHB-210ENST00000544151 PLEKHO1Q53GL0 409 aaPredicted RBP21.2■□□□□ 0.98
LDHB-210ENST00000544151 ZNF530Q6P9A1 599 aaPredicted RBP21.2■□□□□ 0.98
LDHB-210ENST00000544151 SMARCC1Q92922 1105 aaPredicted RBP21.2■□□□□ 0.98
LDHB-210ENST00000544151 KDM6AO15550 1401 aaPredicted RBP21.2■□□□□ 0.98
LDHB-210ENST00000544151 UBR3Q6ZT12 1888 aa21.2■□□□□ 0.98
LDHB-210ENST00000544151 AMOTQ4VCS5 1084 aa21.18■□□□□ 0.98
LDHB-210ENST00000544151 HSP90AB1P08238 724 aaKnown RBP21.17■□□□□ 0.98
LDHB-210ENST00000544151 C1orf141Q5JVX7 400 aa21.16■□□□□ 0.98
LDHB-210ENST00000544151 DIAPH1O60610 1272 aaKnown RBP21.15■□□□□ 0.98
LDHB-210ENST00000544151 HMOX1P09601 288 aa21.15■□□□□ 0.98
LDHB-210ENST00000544151 DCAF5Q96JK2 942 aa21.15■□□□□ 0.98
LDHB-210ENST00000544151 SGIP1Q9BQI5 828 aa21.15■□□□□ 0.98
LDHB-210ENST00000544151 RNF216Q9NWF9 866 aaPredicted RBP21.15■□□□□ 0.98
LDHB-210ENST00000544151 COL5A3P25940 1745 aaPredicted RBP21.15■□□□□ 0.98
LDHB-210ENST00000544151 ASAP1Q9ULH1 1129 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms