RNA–Protein interactions for RNA: ENST00000544140.5

MRPL48-213, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 2

Gene MRPL48, Length 996 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-213ENST00000544140 SHANK3Q9BYB0 1731 aa17.02■□□□□ 0.32
MRPL48-213ENST00000544140 KAT6BQ8WYB5 2073 aa17.02■□□□□ 0.32
MRPL48-213ENST00000544140 COG3Q96JB2 828 aa17.02■□□□□ 0.32
MRPL48-213ENST00000544140 RTL1A6NKG5 1358 aa17.02■□□□□ 0.31
MRPL48-213ENST00000544140 NSD2O96028 1365 aa17.02■□□□□ 0.31
MRPL48-213ENST00000544140 SLC16A10Q8TF71 515 aa17.01■□□□□ 0.31
MRPL48-213ENST00000544140 LY75O60449 1722 aa17■□□□□ 0.31
MRPL48-213ENST00000544140 ARXQ96QS3 562 aa17■□□□□ 0.31
MRPL48-213ENST00000544140 MEGF6O75095 1541 aa17■□□□□ 0.31
MRPL48-213ENST00000544140 FBLN1P23142 703 aa16.99■□□□□ 0.31
MRPL48-213ENST00000544140 DDX54Q8TDD1 881 aaKnown RBP16.99■□□□□ 0.31
MRPL48-213ENST00000544140 RGPD2P0DJD1 1756 aa16.99■□□□□ 0.31
MRPL48-213ENST00000544140 FYB1O15117 783 aa16.98■□□□□ 0.31
MRPL48-213ENST00000544140 ZCRB1Q8TBF4 217 aaKnown RBP16.98■□□□□ 0.31
MRPL48-213ENST00000544140 LTV1Q96GA3 475 aaPredicted RBP16.98■□□□□ 0.31
MRPL48-213ENST00000544140 DOT1LQ8TEK3 1739 aa16.98■□□□□ 0.31
MRPL48-213ENST00000544140 CGNL1Q0VF96 1302 aa16.97■□□□□ 0.31
MRPL48-213ENST00000544140 PNPLA7Q6ZV29 1317 aa16.97■□□□□ 0.31
MRPL48-213ENST00000544140 AMPHP49418 695 aa16.97■□□□□ 0.31
MRPL48-213ENST00000544140 PRIM1P49642 420 aaKnown RBP16.97■□□□□ 0.31
MRPL48-213ENST00000544140 CHD4Q14839 1912 aa16.96■□□□□ 0.31
MRPL48-213ENST00000544140 NBPF6Q5VWK0 638 aa16.96■□□□□ 0.31
MRPL48-213ENST00000544140 ZNF784Q8NCA9 323 aaPredicted RBP16.96■□□□□ 0.31
MRPL48-213ENST00000544140 NBPF4Q96M43 638 aa16.96■□□□□ 0.31
MRPL48-213ENST00000544140 TUBGCP6Q96RT7 1819 aa16.96■□□□□ 0.3
MRPL48-213ENST00000544140 KIF24Q5T7B8 1368 aa16.95■□□□□ 0.3
MRPL48-213ENST00000544140 INSRP06213 1382 aa16.93■□□□□ 0.3
MRPL48-213ENST00000544140 USP47Q96K76 1375 aa16.93■□□□□ 0.3
MRPL48-213ENST00000544140 TMF1P82094 1093 aa16.93■□□□□ 0.3
MRPL48-213ENST00000544140 RRS1Q15050 365 aaKnown RBP16.93■□□□□ 0.3
MRPL48-213ENST00000544140 GGNBP2Q9H3C7 697 aa16.92■□□□□ 0.3
MRPL48-213ENST00000544140 KCNQ4P56696 695 aa16.91■□□□□ 0.3
MRPL48-213ENST00000544140 SYTL4Q96C24 671 aaPredicted RBP16.91■□□□□ 0.3
MRPL48-213ENST00000544140 TFCP2L1Q9NZI6 479 aa16.91■□□□□ 0.3
MRPL48-213ENST00000544140 FLT4P35916 1363 aa16.9■□□□□ 0.3
MRPL48-213ENST00000544140 NCAPD2Q15021 1401 aa16.9■□□□□ 0.3
MRPL48-213ENST00000544140 SMG6Q86US8 1419 aaKnown RBP16.9■□□□□ 0.3
MRPL48-213ENST00000544140 POLD1P28340 1107 aa16.89■□□□□ 0.29
MRPL48-213ENST00000544140 HSP90AB2PQ58FF8 381 aa16.89■□□□□ 0.29
MRPL48-213ENST00000544140 CCNL1Q9UK58 526 aaPredicted RBP16.89■□□□□ 0.29
MRPL48-213ENST00000544140 KIF20BQ96Q89 1820 aa16.89■□□□□ 0.29
MRPL48-213ENST00000544140 CDCA8Q53HL2 280 aa16.88■□□□□ 0.29
MRPL48-213ENST00000544140 USHBP1Q8N6Y0 703 aa16.88■□□□□ 0.29
MRPL48-213ENST00000544140 RAPGEF4Q8WZA2 1011 aa16.88■□□□□ 0.29
MRPL48-213ENST00000544140 CARD14Q9BXL6 1004 aa16.87■□□□□ 0.29
MRPL48-213ENST00000544140 PCDH11XQ9BZA7 1347 aa16.87■□□□□ 0.29
MRPL48-213ENST00000544140 PCDH11YQ9BZA8 1340 aa16.87■□□□□ 0.29
MRPL48-213ENST00000544140 TATP17735 454 aaPredicted RBP16.86■□□□□ 0.29
MRPL48-213ENST00000544140 COL23A1Q86Y22 540 aaPredicted RBP16.86■□□□□ 0.29
MRPL48-213ENST00000544140 RNF39Q9H2S5 420 aa16.86■□□□□ 0.29
MRPL48-213ENST00000544140 ANKRD26Q9UPS8 1709 aa16.86■□□□□ 0.29
MRPL48-213ENST00000544140 C5P01031 1676 aa16.85■□□□□ 0.29
MRPL48-213ENST00000544140 PKD1L3Q7Z443 1732 aa16.85■□□□□ 0.29
MRPL48-213ENST00000544140 CYP27B1O15528 508 aa16.85■□□□□ 0.29
MRPL48-213ENST00000544140 HMGB2P26583 209 aaKnown RBP16.85■□□□□ 0.29
MRPL48-213ENST00000544140 TAF1LQ8IZX4 1826 aa16.84■□□□□ 0.29
MRPL48-213ENST00000544140 GPR162Q16538 588 aa16.84■□□□□ 0.29
MRPL48-213ENST00000544140 NLGN2Q8NFZ4 835 aa16.84■□□□□ 0.29
MRPL48-213ENST00000544140 CEP350Q5VT06 3117 aa16.84■□□□□ 0.29
MRPL48-213ENST00000544140 TOGARAM1Q9Y4F4 1720 aa16.84■□□□□ 0.29
MRPL48-213ENST00000544140 NKX1-1Q15270 411 aaPredicted RBP16.83■□□□□ 0.28
MRPL48-213ENST00000544140 PALLDQ8WX93 1383 aa16.83■□□□□ 0.28
MRPL48-213ENST00000544140 TIMELESSQ9UNS1 1208 aa16.83■□□□□ 0.28
MRPL48-213ENST00000544140 EMILIN1Q9Y6C2 1016 aa16.82■□□□□ 0.28
MRPL48-213ENST00000544140 NSD3Q9BZ95 1437 aa16.81■□□□□ 0.28
MRPL48-213ENST00000544140 WASHC2AQ641Q2 1341 aa16.81■□□□□ 0.28
MRPL48-213ENST00000544140 FLAD1Q8NFF5 587 aa16.81■□□□□ 0.28
MRPL48-213ENST00000544140 ITGB4P16144 1822 aa16.81■□□□□ 0.28
MRPL48-213ENST00000544140 TRIM26Q12899 539 aaPredicted RBP16.8■□□□□ 0.28
MRPL48-213ENST00000544140 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.8■□□□□ 0.28
MRPL48-213ENST00000544140 MAP2P11137 1827 aaKnown RBP16.8■□□□□ 0.28
MRPL48-213ENST00000544140 PLEKHG2Q9H7P9 1386 aa16.79■□□□□ 0.28
MRPL48-213ENST00000544140 YBX3P16989 372 aaKnown RBP eCLIP16.79■□□□□ 0.282e-7■■■■□ 20.4
MRPL48-213ENST00000544140 C1QTNF8P60827 252 aa16.79■□□□□ 0.28
MRPL48-213ENST00000544140 SMARCC1Q92922 1105 aaPredicted RBP16.79■□□□□ 0.28
MRPL48-213ENST00000544140 C4BP0C0L5 1744 aa16.79■□□□□ 0.28
MRPL48-213ENST00000544140 MPRIPQ6WCQ1 1025 aa16.78■□□□□ 0.28
MRPL48-213ENST00000544140 KLHL34Q8N239 644 aa16.78■□□□□ 0.28
MRPL48-213ENST00000544140 CD2APQ9Y5K6 639 aa16.78■□□□□ 0.28
MRPL48-213ENST00000544140 GRIN3BO60391 1043 aa16.77■□□□□ 0.28
MRPL48-213ENST00000544140 AMIGO3Q86WK7 504 aa16.77■□□□□ 0.28
MRPL48-213ENST00000544140 PIGBQ92521 554 aa16.77■□□□□ 0.28
MRPL48-213ENST00000544140 UBR3Q6ZT12 1888 aa16.77■□□□□ 0.27
MRPL48-213ENST00000544140 EYA1Q99502 592 aa16.76■□□□□ 0.27
MRPL48-213ENST00000544140 POLKQ9UBT6 870 aa16.76■□□□□ 0.27
MRPL48-213ENST00000544140 MSL1Q68DK7 614 aa16.75■□□□□ 0.27
MRPL48-213ENST00000544140 SPG7Q9UQ90 795 aa16.75■□□□□ 0.27
MRPL48-213ENST00000544140 CLSPNQ9HAW4 1339 aa16.74■□□□□ 0.27
MRPL48-213ENST00000544140 LOC102724428A0A0B4J2F2 783 aa16.72■□□□□ 0.27
MRPL48-213ENST00000544140 PHKG2P15735 406 aa16.72■□□□□ 0.27
MRPL48-213ENST00000544140 SSFA2P28290 1259 aa16.72■□□□□ 0.27
MRPL48-213ENST00000544140 SIK1P57059 783 aa16.72■□□□□ 0.27
MRPL48-213ENST00000544140 PELP1Q8IZL8 1130 aaKnown RBP16.72■□□□□ 0.27
MRPL48-213ENST00000544140 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.71■□□□□ 0.27
MRPL48-213ENST00000544140 IFNL2Q8IZJ0 200 aa16.71■□□□□ 0.27
MRPL48-213ENST00000544140 LINC00116Q8NCU8 138 aa16.71■□□□□ 0.27
MRPL48-213ENST00000544140 AK7Q96M32 723 aa16.71■□□□□ 0.27
MRPL48-213ENST00000544140 ZNF831Q5JPB2 1677 aa16.7■□□□□ 0.26
MRPL48-213ENST00000544140 ADCY9O60503 1353 aa16.7■□□□□ 0.26
MRPL48-213ENST00000544140 PPM1GO15355 546 aaPredicted RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms