RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 KIAA0232Q92628 1395 aa21.66■■□□□ 1.06
PTPRO-209ENST00000543886 HDAC1Q13547 482 aaPredicted RBP21.65■■□□□ 1.06
PTPRO-209ENST00000543886 KIF1AQ12756 1690 aa21.65■■□□□ 1.06
PTPRO-209ENST00000543886 PDZRN3Q9UPQ7 1066 aa21.64■■□□□ 1.05
PTPRO-209ENST00000543886 IP6K1Q92551 441 aa21.64■■□□□ 1.05
PTPRO-209ENST00000543886 API5Q9BZZ5 524 aaKnown RBP21.64■■□□□ 1.05
PTPRO-209ENST00000543886 BCL11AQ9H165 835 aa21.64■■□□□ 1.05
PTPRO-209ENST00000543886 VIRMAQ69YN4 1812 aaKnown RBP21.63■■□□□ 1.05
PTPRO-209ENST00000543886 ABCC4O15439 1325 aa21.62■■□□□ 1.05
PTPRO-209ENST00000543886 HTATSF1O43719 755 aaKnown RBP21.62■■□□□ 1.05
PTPRO-209ENST00000543886 PHRF1Q9P1Y6 1649 aaKnown RBP21.62■■□□□ 1.05
PTPRO-209ENST00000543886 C19orf44Q9H6X5 657 aa21.62■■□□□ 1.05
PTPRO-209ENST00000543886 ZBTB47Q9UFB7 747 aaPredicted RBP21.61■■□□□ 1.05
PTPRO-209ENST00000543886 LRRC37A3O60309 1634 aa21.61■■□□□ 1.05
PTPRO-209ENST00000543886 XPCQ01831 940 aaPredicted RBP21.6■■□□□ 1.05
PTPRO-209ENST00000543886 TSPYL4Q9UJ04 414 aa21.6■■□□□ 1.05
PTPRO-209ENST00000543886 C1orf167Q5SNV9 1468 aa21.6■■□□□ 1.05
PTPRO-209ENST00000543886 ZBTB7CA1YPR0 619 aa21.6■■□□□ 1.05
PTPRO-209ENST00000543886 GNAT3A8MTJ3 354 aa21.6■■□□□ 1.05
PTPRO-209ENST00000543886 KRT24Q2M2I5 525 aa21.6■■□□□ 1.05
PTPRO-209ENST00000543886 TRPM3Q9HCF6 1732 aaPredicted RBP21.6■■□□□ 1.05
PTPRO-209ENST00000543886 SLIT3O75094 1523 aa21.59■■□□□ 1.05
PTPRO-209ENST00000543886 MAP3K5Q99683 1374 aa21.58■■□□□ 1.05
PTPRO-209ENST00000543886 LMOD2Q6P5Q4 547 aa21.58■■□□□ 1.05
PTPRO-209ENST00000543886 ZBTB7BO15156 539 aaPredicted RBP21.57■■□□□ 1.04
PTPRO-209ENST00000543886 USHBP1Q8N6Y0 703 aa21.57■■□□□ 1.04
PTPRO-209ENST00000543886 MIS18AQ9NYP9 233 aa21.57■■□□□ 1.04
PTPRO-209ENST00000543886 KRT28Q7Z3Y7 464 aa21.56■■□□□ 1.04
PTPRO-209ENST00000543886 GCP02774 474 aa21.56■■□□□ 1.04
PTPRO-209ENST00000543886 ATF3P18847 181 aa21.56■■□□□ 1.04
PTPRO-209ENST00000543886 DDRGK1Q96HY6 314 aa21.56■■□□□ 1.04
PTPRO-209ENST00000543886 SMC5Q8IY18 1101 aa21.55■■□□□ 1.04
PTPRO-209ENST00000543886 TMEM94Q12767 1356 aa21.55■■□□□ 1.04
PTPRO-209ENST00000543886 STRCP1A6NGW2 1772 aa21.54■■□□□ 1.04
PTPRO-209ENST00000543886 MSH6P52701 1360 aa21.54■■□□□ 1.04
PTPRO-209ENST00000543886 DCCP43146 1447 aa21.53■■□□□ 1.04
PTPRO-209ENST00000543886 USP19O94966 1318 aa21.53■■□□□ 1.04
PTPRO-209ENST00000543886 PTPRCP08575 1304 aa21.53■■□□□ 1.04
PTPRO-209ENST00000543886 PLEKHG5O94827 1062 aa21.53■■□□□ 1.04
PTPRO-209ENST00000543886 NBPF6Q5VWK0 638 aa21.53■■□□□ 1.04
PTPRO-209ENST00000543886 NBPF4Q96M43 638 aa21.53■■□□□ 1.04
PTPRO-209ENST00000543886 NCOA3Q9Y6Q9 1424 aa21.52■■□□□ 1.04
PTPRO-209ENST00000543886 MST1RQ04912 1400 aa21.52■■□□□ 1.04
PTPRO-209ENST00000543886 ARHGEF25Q86VW2 580 aa21.52■■□□□ 1.04
PTPRO-209ENST00000543886 RGPD2P0DJD1 1756 aa21.51■■□□□ 1.03
PTPRO-209ENST00000543886 INTS3Q68E01 1043 aaKnown RBP21.5■■□□□ 1.03
PTPRO-209ENST00000543886 C1orf115Q9H7X2 142 aa21.5■■□□□ 1.03
PTPRO-209ENST00000543886 ALS2Q96Q42 1657 aa21.5■■□□□ 1.03
PTPRO-209ENST00000543886 RGS12O14924 1447 aa21.5■■□□□ 1.03
PTPRO-209ENST00000543886 IL17REQ8NFR9 667 aa21.49■■□□□ 1.03
PTPRO-209ENST00000543886 BABAM1Q9NWV8 329 aa21.49■■□□□ 1.03
PTPRO-209ENST00000543886 SLC4A2P04920 1241 aa21.49■■□□□ 1.03
PTPRO-209ENST00000543886 HSPA2P54652 639 aa21.48■■□□□ 1.03
PTPRO-209ENST00000543886 TAF7Q15545 349 aaPredicted RBP21.48■■□□□ 1.03
PTPRO-209ENST00000543886 LRRC59Q96AG4 307 aaKnown RBP21.48■■□□□ 1.03
PTPRO-209ENST00000543886 NUCB1Q02818 461 aa21.47■■□□□ 1.03
PTPRO-209ENST00000543886 GCC1Q96CN9 775 aa21.47■■□□□ 1.03
PTPRO-209ENST00000543886 STK31Q9BXU1 1019 aa21.47■■□□□ 1.03
PTPRO-209ENST00000543886 SOS1Q07889 1333 aaPredicted RBP21.46■■□□□ 1.03
PTPRO-209ENST00000543886 ANKRD24Q8TF21 1146 aa21.46■■□□□ 1.03
PTPRO-209ENST00000543886 CADPS2Q86UW7 1296 aa21.46■■□□□ 1.03
PTPRO-209ENST00000543886 FAM208AQ9UK61 1670 aaKnown RBP21.45■■□□□ 1.03
PTPRO-209ENST00000543886 LMO7Q8WWI1 1683 aa21.45■■□□□ 1.02
PTPRO-209ENST00000543886 PLEKHO1Q53GL0 409 aaPredicted RBP21.44■■□□□ 1.02
PTPRO-209ENST00000543886 NCAPD2Q15021 1401 aa21.44■■□□□ 1.02
PTPRO-209ENST00000543886 CEMIPQ8WUJ3 1361 aa21.44■■□□□ 1.02
PTPRO-209ENST00000543886 CCDC30Q5VVM6 783 aa21.44■■□□□ 1.02
PTPRO-209ENST00000543886 CHD1LQ86WJ1 897 aa21.44■■□□□ 1.02
PTPRO-209ENST00000543886 CAMTA1Q9Y6Y1 1673 aa21.44■■□□□ 1.02
PTPRO-209ENST00000543886 MED1Q15648 1581 aaPredicted RBP21.43■■□□□ 1.02
PTPRO-209ENST00000543886 AMOTQ4VCS5 1084 aa21.43■■□□□ 1.02
PTPRO-209ENST00000543886 ZNF530Q6P9A1 599 aaPredicted RBP21.43■■□□□ 1.02
PTPRO-209ENST00000543886 LNPKQ9C0E8 428 aa21.42■■□□□ 1.02
PTPRO-209ENST00000543886 NPHP3Q7Z494 1330 aa21.42■■□□□ 1.02
PTPRO-209ENST00000543886 AKAP4Q5JQC9 854 aa21.41■■□□□ 1.02
PTPRO-209ENST00000543886 SIRT2Q8IXJ6 389 aa21.41■■□□□ 1.02
PTPRO-209ENST00000543886 UPF2Q9HAU5 1272 aaKnown RBP21.41■■□□□ 1.02
PTPRO-209ENST00000543886 DAXXQ9UER7 740 aaPredicted RBP21.41■■□□□ 1.02
PTPRO-209ENST00000543886 RGPD5Q99666 1765 aa21.4■■□□□ 1.02
PTPRO-209ENST00000543886 SEC24BO95487 1268 aa21.4■■□□□ 1.02
PTPRO-209ENST00000543886 ANKRD45Q5TZF3 282 aa21.4■■□□□ 1.02
PTPRO-209ENST00000543886 G2E3Q7L622 706 aa21.4■■□□□ 1.02
PTPRO-209ENST00000543886 KDM4FA0A1W2PPD8 638 aa21.4■■□□□ 1.02
PTPRO-209ENST00000543886 ZC3H6P61129 1189 aaKnown RBP21.4■■□□□ 1.02
PTPRO-209ENST00000543886 DDX17Q92841 729 aaKnown RBP21.4■■□□□ 1.02
PTPRO-209ENST00000543886 AXIN2Q9Y2T1 843 aa21.4■■□□□ 1.02
PTPRO-209ENST00000543886 CCT4P50991 539 aaKnown RBP21.39■■□□□ 1.01
PTPRO-209ENST00000543886 C1orf141Q5JVX7 400 aa21.39■■□□□ 1.01
PTPRO-209ENST00000543886 CACNA1FO60840 1977 aa21.39■■□□□ 1.01
PTPRO-209ENST00000543886 TNS3Q68CZ2 1445 aa21.38■■□□□ 1.01
PTPRO-209ENST00000543886 SLC4A10Q6U841 1118 aa21.38■■□□□ 1.01
PTPRO-209ENST00000543886 LGR6Q9HBX8 967 aa21.38■■□□□ 1.01
PTPRO-209ENST00000543886 KDM3BQ7LBC6 1761 aa21.38■■□□□ 1.01
PTPRO-209ENST00000543886 TEFQ10587 303 aa21.37■■□□□ 1.01
PTPRO-209ENST00000543886 NECTIN2Q92692 538 aa21.37■■□□□ 1.01
PTPRO-209ENST00000543886 ERBB3P21860 1342 aa21.37■■□□□ 1.01
PTPRO-209ENST00000543886 XIRP1Q702N8 1843 aaKnown RBP21.37■■□□□ 1.01
PTPRO-209ENST00000543886 FLIIQ13045 1269 aa21.36■■□□□ 1.01
PTPRO-209ENST00000543886 RPAP2Q8IXW5 612 aaPredicted RBP21.36■■□□□ 1.01
PTPRO-209ENST00000543886 ATP10DQ9P241 1426 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms