RNA–Protein interactions for RNA: ENST00000543475.1

SMCR5-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 5, humanhuman

BASIC

Gene SMCR5, Length 2,844 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR5-201ENST00000543475 PRDM4Q9UKN5 801 aa15.32■□□□□ 0.04
SMCR5-201ENST00000543475 ZNF853P0CG23 659 aa15.32■□□□□ 0.04
SMCR5-201ENST00000543475 PDIA4P13667 645 aaKnown RBP15.31■□□□□ 0.04
SMCR5-201ENST00000543475 KIF24Q5T7B8 1368 aa15.31■□□□□ 0.04
SMCR5-201ENST00000543475 NEXMIFQ5QGS0 1516 aa15.31■□□□□ 0.04
SMCR5-201ENST00000543475 KIF20BQ96Q89 1820 aa15.31■□□□□ 0.04
SMCR5-201ENST00000543475 AEBP2Q6ZN18 517 aaPredicted RBP15.31■□□□□ 0.04
SMCR5-201ENST00000543475 ANKRD44Q8N8A2 993 aa15.31■□□□□ 0.04
SMCR5-201ENST00000543475 POLKQ9UBT6 870 aa15.31■□□□□ 0.04
SMCR5-201ENST00000543475 ERC2O15083 957 aa15.3■□□□□ 0.04
SMCR5-201ENST00000543475 SMARCA5O60264 1052 aaPredicted RBP15.3■□□□□ 0.04
SMCR5-201ENST00000543475 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.3■□□□□ 0.04
SMCR5-201ENST00000543475 KIAA2012Q0VF49 1180 aa15.3■□□□□ 0.04
SMCR5-201ENST00000543475 PRAM1Q96QH2 718 aa15.3■□□□□ 0.04
SMCR5-201ENST00000543475 TSPY26PQ9H489 355 aa15.3■□□□□ 0.04
SMCR5-201ENST00000543475 RPAP2Q8IXW5 612 aaPredicted RBP15.3■□□□□ 0.04
SMCR5-201ENST00000543475 NEK4P51957 841 aa15.29■□□□□ 0.04
SMCR5-201ENST00000543475 DNTTIP2Q5QJE6 756 aaKnown RBP15.29■□□□□ 0.04
SMCR5-201ENST00000543475 CABP1Q9NZU7 370 aa15.29■□□□□ 0.04
SMCR5-201ENST00000543475 SYAP1Q96A49 352 aaPredicted RBP15.29■□□□□ 0.04
SMCR5-201ENST00000543475 MAP2P11137 1827 aaKnown RBP15.28■□□□□ 0.04
SMCR5-201ENST00000543475 LMOD3Q0VAK6 560 aa15.28■□□□□ 0.04
SMCR5-201ENST00000543475 SMAP1Q8IYB5 467 aaPredicted RBP15.28■□□□□ 0.04
SMCR5-201ENST00000543475 TMX3Q96JJ7 454 aa15.28■□□□□ 0.04
SMCR5-201ENST00000543475 CEP85Q6P2H3 762 aa15.28■□□□□ 0.04
SMCR5-201ENST00000543475 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.27■□□□□ 0.04
SMCR5-201ENST00000543475 ATP10DQ9P241 1426 aa15.27■□□□□ 0.04
SMCR5-201ENST00000543475 YEATS2Q9ULM3 1422 aa15.27■□□□□ 0.04
SMCR5-201ENST00000543475 HECW2Q9P2P5 1572 aa15.27■□□□□ 0.04
SMCR5-201ENST00000543475 ABCC3O15438 1527 aa15.27■□□□□ 0.04
SMCR5-201ENST00000543475 ZBTB7CA1YPR0 619 aa15.27■□□□□ 0.03
SMCR5-201ENST00000543475 CDK19Q9BWU1 502 aa15.27■□□□□ 0.03
SMCR5-201ENST00000543475 DLG5Q8TDM6 1919 aa15.26■□□□□ 0.03
SMCR5-201ENST00000543475 PIK3C2BO00750 1634 aa15.26■□□□□ 0.03
SMCR5-201ENST00000543475 PTPRMP28827 1452 aa15.26■□□□□ 0.03
SMCR5-201ENST00000543475 BRD1O95696 1058 aa15.26■□□□□ 0.03
SMCR5-201ENST00000543475 YTHDC2Q9H6S0 1430 aaKnown RBP15.26■□□□□ 0.03
SMCR5-201ENST00000543475 SIGLEC1Q9BZZ2 1709 aa15.26■□□□□ 0.03
SMCR5-201ENST00000543475 FAM83GA6ND36 823 aa15.25■□□□□ 0.03
SMCR5-201ENST00000543475 MCM2P49736 904 aa15.25■□□□□ 0.03
SMCR5-201ENST00000543475 CLTCQ00610 1675 aaKnown RBP15.25■□□□□ 0.03
SMCR5-201ENST00000543475 PHF14O94880 888 aa15.25■□□□□ 0.03
SMCR5-201ENST00000543475 RIMS2Q9UQ26 1411 aa15.25■□□□□ 0.03
SMCR5-201ENST00000543475 EMILIN1Q9Y6C2 1016 aa15.25■□□□□ 0.03
SMCR5-201ENST00000543475 MYRIPQ8NFW9 859 aa15.24■□□□□ 0.03
SMCR5-201ENST00000543475 CCDC94Q9BW85 323 aaPredicted RBP15.24■□□□□ 0.03
SMCR5-201ENST00000543475 FRMPD1Q5SYB0 1578 aa15.24■□□□□ 0.03
SMCR5-201ENST00000543475 IL13P35225 146 aa15.24■□□□□ 0.03
SMCR5-201ENST00000543475 DCTN1Q14203 1278 aa15.24■□□□□ 0.03
SMCR5-201ENST00000543475 NOL8Q76FK4 1167 aaKnown RBP15.24■□□□□ 0.03
SMCR5-201ENST00000543475 RTL1A6NKG5 1358 aa15.23■□□□□ 0.03
SMCR5-201ENST00000543475 IDI1Q13907 227 aa15.23■□□□□ 0.03
SMCR5-201ENST00000543475 PRDM10Q9NQV6 1147 aa15.23■□□□□ 0.03
SMCR5-201ENST00000543475 MSH6P52701 1360 aa15.23■□□□□ 0.03
SMCR5-201ENST00000543475 FOXD4L6Q3SYB3 417 aaPredicted RBP15.23■□□□□ 0.03
SMCR5-201ENST00000543475 FOXD4L3Q6VB84 417 aaPredicted RBP15.23■□□□□ 0.03
SMCR5-201ENST00000543475 MPNDQ8N594 471 aa15.23■□□□□ 0.03
SMCR5-201ENST00000543475 MCCP23508 829 aa15.22■□□□□ 0.03
SMCR5-201ENST00000543475 MEIS3Q99687 375 aa15.22■□□□□ 0.03
SMCR5-201ENST00000543475 ASXL2Q76L83 1435 aa15.22■□□□□ 0.03
SMCR5-201ENST00000543475 HMMRO75330 724 aa15.22■□□□□ 0.03
SMCR5-201ENST00000543475 ARHGEF40Q8TER5 1519 aa15.22■□□□□ 0.03
SMCR5-201ENST00000543475 HAP1P54257 671 aaPredicted RBP15.21■□□□□ 0.03
SMCR5-201ENST00000543475 PDE1AP54750 535 aa15.21■□□□□ 0.03
SMCR5-201ENST00000543475 CUL4AQ13619 759 aa15.21■□□□□ 0.03
SMCR5-201ENST00000543475 PRIMPOLQ96LW4 560 aa15.21■□□□□ 0.03
SMCR5-201ENST00000543475 HMGN5P82970 282 aaKnown RBP15.21■□□□□ 0.03
SMCR5-201ENST00000543475 FAM184AQ8NB25 1140 aa15.21■□□□□ 0.03
SMCR5-201ENST00000543475 INTS4Q96HW7 963 aaKnown RBP15.21■□□□□ 0.03
SMCR5-201ENST00000543475 ZNF830Q96NB3 372 aaPredicted RBP15.21■□□□□ 0.03
SMCR5-201ENST00000543475 GDPD2Q9HCC8 539 aa15.21■□□□□ 0.03
SMCR5-201ENST00000543475 TCHHQ07283 1943 aa15.21■□□□□ 0.03
SMCR5-201ENST00000543475 PIBF1Q8WXW3 757 aa15.21■□□□□ 0.02
SMCR5-201ENST00000543475 GADD45BO75293 160 aaPredicted RBP15.2■□□□□ 0.02
SMCR5-201ENST00000543475 NOLC1Q14978 699 aaKnown RBP eCLIP15.2■□□□□ 0.02
SMCR5-201ENST00000543475 KRT24Q2M2I5 525 aa15.2■□□□□ 0.02
SMCR5-201ENST00000543475 OSBPL3Q9H4L5 887 aa15.2■□□□□ 0.02
SMCR5-201ENST00000543475 RGS12O14924 1447 aa15.2■□□□□ 0.02
SMCR5-201ENST00000543475 UVSSAQ2YD98 709 aa15.2■□□□□ 0.02
SMCR5-201ENST00000543475 USP25Q9UHP3 1055 aa15.2■□□□□ 0.02
SMCR5-201ENST00000543475 FGD1P98174 961 aa15.19■□□□□ 0.02
SMCR5-201ENST00000543475 ESYT1Q9BSJ8 1104 aa15.19■□□□□ 0.02
SMCR5-201ENST00000543475 MYO5BQ9ULV0 1848 aa15.19■□□□□ 0.02
SMCR5-201ENST00000543475 USP48Q86UV5 1035 aa15.19■□□□□ 0.02
SMCR5-201ENST00000543475 JARID2Q92833 1246 aaPredicted RBP15.19■□□□□ 0.02
SMCR5-201ENST00000543475 CPSF1Q10570 1443 aaKnown RBP15.18■□□□□ 0.02
SMCR5-201ENST00000543475 PTPRCP08575 1304 aa15.18■□□□□ 0.02
SMCR5-201ENST00000543475 TSC1Q92574 1164 aa15.18■□□□□ 0.02
SMCR5-201ENST00000543475 ANO2Q9NQ90 1003 aa15.18■□□□□ 0.02
SMCR5-201ENST00000543475 PALD1Q9ULE6 856 aa15.18■□□□□ 0.02
SMCR5-201ENST00000543475 POGZQ7Z3K3 1410 aa15.18■□□□□ 0.02
SMCR5-201ENST00000543475 MLH3Q9UHC1 1453 aa15.18■□□□□ 0.02
SMCR5-201ENST00000543475 WDR33Q9C0J8 1336 aaKnown RBP15.17■□□□□ 0.02
SMCR5-201ENST00000543475 ANAPC15P60006 121 aa15.17■□□□□ 0.02
SMCR5-201ENST00000543475 TSHZ3Q63HK5 1081 aa15.17■□□□□ 0.02
SMCR5-201ENST00000543475 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.17■□□□□ 0.02
SMCR5-201ENST00000543475 TTC12Q9H892 705 aaPredicted RBP15.17■□□□□ 0.02
SMCR5-201ENST00000543475 CDK12Q9NYV4 1490 aaPredicted RBP15.17■□□□□ 0.02
SMCR5-201ENST00000543475 ADCY5O95622 1261 aa15.17■□□□□ 0.02
SMCR5-201ENST00000543475 SLC52A1Q9NWF4 448 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms