RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-213ENST00000543324 RAB3GAP2Q9H2M9 1393 aa9.52□□□□□ -0.88
CIT-213ENST00000543324 USP54Q70EL1 1684 aa9.52□□□□□ -0.89
CIT-213ENST00000543324 ADGRB1O14514 1584 aa9.52□□□□□ -0.89
CIT-213ENST00000543324 LY75O60449 1722 aa9.52□□□□□ -0.89
CIT-213ENST00000543324 PAK3O75914 559 aaPredicted RBP9.52□□□□□ -0.89
CIT-213ENST00000543324 BRCA1P38398 1863 aaKnown RBP9.52□□□□□ -0.89
CIT-213ENST00000543324 MPHOSPH9Q99550 1183 aa9.52□□□□□ -0.89
CIT-213ENST00000543324 STK26Q9P289 416 aa9.52□□□□□ -0.89
CIT-213ENST00000543324 BCS1LQ9Y276 419 aa9.52□□□□□ -0.89
CIT-213ENST00000543324 N4BP2Q86UW6 1770 aaPredicted RBP9.52□□□□□ -0.89
CIT-213ENST00000543324 ARFGEF1Q9Y6D6 1849 aa9.52□□□□□ -0.89
CIT-213ENST00000543324 COL6A3P12111 3177 aa9.51□□□□□ -0.89
CIT-213ENST00000543324 SBF1O95248 1867 aa9.51□□□□□ -0.89
CIT-213ENST00000543324 PRR36Q9H6K5 1346 aa9.51□□□□□ -0.89
CIT-213ENST00000543324 LTBP1Q14766 1721 aa9.51□□□□□ -0.89
CIT-213ENST00000543324 RNF181Q9P0P0 153 aa9.5□□□□□ -0.89
CIT-213ENST00000543324 MEGF6O75095 1541 aa9.5□□□□□ -0.89
CIT-213ENST00000543324 ABCC6O95255 1503 aa9.5□□□□□ -0.89
CIT-213ENST00000543324 ADGRF5Q8IZF2 1346 aa9.5□□□□□ -0.89
CIT-213ENST00000543324 KCNQ4P56696 695 aa9.49□□□□□ -0.89
CIT-213ENST00000543324 NBPF15Q8N660 670 aa9.49□□□□□ -0.89
CIT-213ENST00000543324 CASP8AP2Q9UKL3 1982 aa9.48□□□□□ -0.89
CIT-213ENST00000543324 EXOC5O00471 708 aa9.48□□□□□ -0.89
CIT-213ENST00000543324 DGKZQ13574 1117 aa9.48□□□□□ -0.89
CIT-213ENST00000543324 TOM1L2Q6ZVM7 507 aa9.48□□□□□ -0.89
CIT-213ENST00000543324 CNKSR2Q8WXI2 1034 aa9.48□□□□□ -0.89
CIT-213ENST00000543324 ZC3H4Q9UPT8 1303 aaKnown RBP9.48□□□□□ -0.89
CIT-213ENST00000543324 PASKQ96RG2 1323 aa9.47□□□□□ -0.89
CIT-213ENST00000543324 ITSN1Q15811 1721 aa9.47□□□□□ -0.89
CIT-213ENST00000543324 YTHDC2Q9H6S0 1430 aaKnown RBP9.47□□□□□ -0.89
CIT-213ENST00000543324 KAT6BQ8WYB5 2073 aa9.46□□□□□ -0.89
CIT-213ENST00000543324 GLTPD2A6NH11 291 aa9.46□□□□□ -0.9
CIT-213ENST00000543324 MNX1P50219 401 aaPredicted RBP9.46□□□□□ -0.9
CIT-213ENST00000543324 NUTM2GQ5VZR2 741 aa9.46□□□□□ -0.9
CIT-213ENST00000543324 SIRT1Q96EB6 747 aa9.46□□□□□ -0.9
CIT-213ENST00000543324 PCGF6Q9BYE7 350 aa9.46□□□□□ -0.9
CIT-213ENST00000543324 RASSF10A6NK89 507 aa9.45□□□□□ -0.9
CIT-213ENST00000543324 POTECB2RU33 542 aa9.45□□□□□ -0.9
CIT-213ENST00000543324 CHADLQ6NUI6 762 aa9.45□□□□□ -0.9
CIT-213ENST00000543324 ZNF219Q9P2Y4 722 aaPredicted RBP9.45□□□□□ -0.9
CIT-213ENST00000543324 WDR17Q8IZU2 1322 aa9.45□□□□□ -0.9
CIT-213ENST00000543324 WDR33Q9C0J8 1336 aaKnown RBP9.45□□□□□ -0.9
CIT-213ENST00000543324 TMEM88BA6NKF7 163 aa9.44□□□□□ -0.9
CIT-213ENST00000543324 FCHSD2O94868 740 aa9.44□□□□□ -0.9
CIT-213ENST00000543324 TGFB2P61812 414 aa9.44□□□□□ -0.9
CIT-213ENST00000543324 KDM6AO15550 1401 aaPredicted RBP9.43□□□□□ -0.9
CIT-213ENST00000543324 NGDNQ8NEJ9 315 aaKnown RBP9.43□□□□□ -0.9
CIT-213ENST00000543324 BEGAINQ9BUH8 593 aa9.43□□□□□ -0.9
CIT-213ENST00000543324 C14orf93Q9H972 538 aaKnown RBP9.43□□□□□ -0.9
CIT-213ENST00000543324 TSKSQ9UJT2 592 aa9.43□□□□□ -0.9
CIT-213ENST00000543324 TIAM2Q8IVF5 1701 aa9.42□□□□□ -0.9
CIT-213ENST00000543324 TOGARAM1Q9Y4F4 1720 aa9.42□□□□□ -0.9
CIT-213ENST00000543324 C5P01031 1676 aa9.42□□□□□ -0.9
CIT-213ENST00000543324 A0A0G2JLW4 131 aa9.42□□□□□ -0.9
CIT-213ENST00000543324 DEFB115Q30KQ5 88 aa9.42□□□□□ -0.9
CIT-213ENST00000543324 FLAD1Q8NFF5 587 aa9.42□□□□□ -0.9
CIT-213ENST00000543324 HOXD11P31277 338 aaPredicted RBP9.41□□□□□ -0.9
CIT-213ENST00000543324 ZEB1P37275 1124 aaPredicted RBP9.41□□□□□ -0.9
CIT-213ENST00000543324 RGL3Q3MIN7 710 aa9.41□□□□□ -0.9
CIT-213ENST00000543324 TMEM132EQ6IEE7 984 aa9.41□□□□□ -0.9
CIT-213ENST00000543324 MKI67P46013 3256 aaKnown RBP9.41□□□□□ -0.9
CIT-213ENST00000543324 PPIP5K1Q6PFW1 1433 aa9.4□□□□□ -0.9
CIT-213ENST00000543324 POTEIP0CG38 1075 aa9.4□□□□□ -0.9
CIT-213ENST00000543324 POTEJP0CG39 1038 aa9.4□□□□□ -0.9
CIT-213ENST00000543324 DCAF5Q96JK2 942 aa9.4□□□□□ -0.9
CIT-213ENST00000543324 CARD10Q9BWT7 1032 aa9.4□□□□□ -0.9
CIT-213ENST00000543324 CCNL1Q9UK58 526 aaPredicted RBP9.4□□□□□ -0.9
CIT-213ENST00000543324 CACNA1AO00555 2505 aa9.4□□□□□ -0.91
CIT-213ENST00000543324 EIF3AQ14152 1382 aaKnown RBP9.39□□□□□ -0.91
CIT-213ENST00000543324 ERBB3P21860 1342 aa9.39□□□□□ -0.91
CIT-213ENST00000543324 UNC80Q8N2C7 3258 aa9.39□□□□□ -0.91
CIT-213ENST00000543324 GCP02774 474 aa9.39□□□□□ -0.91
CIT-213ENST00000543324 TRIOBPQ9H2D6 2365 aa9.38□□□□□ -0.91
CIT-213ENST00000543324 TAF1LQ8IZX4 1826 aa9.38□□□□□ -0.91
CIT-213ENST00000543324 SLIT3O75094 1523 aa9.38□□□□□ -0.91
CIT-213ENST00000543324 DPEP1P16444 411 aa9.38□□□□□ -0.91
CIT-213ENST00000543324 SMIM5Q71RC9 77 aa9.38□□□□□ -0.91
CIT-213ENST00000543324 RNF216Q9NWF9 866 aaPredicted RBP9.38□□□□□ -0.91
CIT-213ENST00000543324 UBR3Q6ZT12 1888 aa9.37□□□□□ -0.91
CIT-213ENST00000543324 TRIM26Q12899 539 aaPredicted RBP9.37□□□□□ -0.91
CIT-213ENST00000543324 CFAP70Q5T0N1 1121 aa9.37□□□□□ -0.91
CIT-213ENST00000543324 STAC3Q96MF2 364 aa9.37□□□□□ -0.91
CIT-213ENST00000543324 NSD2O96028 1365 aa9.37□□□□□ -0.91
CIT-213ENST00000543324 CCDC7Q96M83 1385 aa9.37□□□□□ -0.91
CIT-213ENST00000543324 CA12O43570 354 aa9.36□□□□□ -0.91
CIT-213ENST00000543324 ITGBL1O95965 494 aaPredicted RBP9.36□□□□□ -0.91
CIT-213ENST00000543324 KCNA3P22001 575 aa9.36□□□□□ -0.91
CIT-213ENST00000543324 SAFB2Q14151 953 aaKnown RBP eCLIP9.36□□□□□ -0.91
CIT-213ENST00000543324 NCBP3Q53F19 620 aaKnown RBP9.36□□□□□ -0.91
CIT-213ENST00000543324 AXIN2Q9Y2T1 843 aa9.36□□□□□ -0.91
CIT-213ENST00000543324 RGPD5Q99666 1765 aa9.36□□□□□ -0.91
CIT-213ENST00000543324 AMIGO3Q86WK7 504 aa9.35□□□□□ -0.91
CIT-213ENST00000543324 ABTB2Q8N961 1025 aa9.35□□□□□ -0.91
CIT-213ENST00000543324 DOT1LQ8TEK3 1739 aa9.35□□□□□ -0.91
CIT-213ENST00000543324 PRAM1Q96QH2 718 aa9.35□□□□□ -0.91
CIT-213ENST00000543324 ZBTB7CA1YPR0 619 aa9.34□□□□□ -0.91
CIT-213ENST00000543324 CAPNS2Q96L46 248 aa9.34□□□□□ -0.91
CIT-213ENST00000543324 GPR101Q96P66 508 aaPredicted RBP9.34□□□□□ -0.91
CIT-213ENST00000543324 COL25A1Q9BXS0 654 aaPredicted RBP9.34□□□□□ -0.91
CIT-213ENST00000543324 CCDC88AQ3V6T2 1871 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms