RNA–Protein interactions for RNA: ENST00000543225.5

CCAR1-214, Transcript of cell division cycle and apoptosis regulator 1, humanhuman

TSL 1 (best)

Gene CCAR1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCAR1-214ENST00000543225 PCDHB15Q9Y5E8 787 aa8.43□□□□□ -1.06
CCAR1-214ENST00000543225 YTHDC2Q9H6S0 1430 aaKnown RBP8.43□□□□□ -1.06
CCAR1-214ENST00000543225 NINLQ9Y2I6 1382 aa8.42□□□□□ -1.06
CCAR1-214ENST00000543225 E9PSI1 815 aa8.42□□□□□ -1.06
CCAR1-214ENST00000543225 BRD2P25440 801 aaKnown RBP8.42□□□□□ -1.06
CCAR1-214ENST00000543225 GTF2E1P29083 439 aaPredicted RBP8.42□□□□□ -1.06
CCAR1-214ENST00000543225 PPP2R1AP30153 589 aa8.42□□□□□ -1.06
CCAR1-214ENST00000543225 BRWD3Q6RI45 1802 aa8.42□□□□□ -1.06
CCAR1-214ENST00000543225 SMC5Q8IY18 1101 aa8.42□□□□□ -1.06
CCAR1-214ENST00000543225 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.42□□□□□ -1.06
CCAR1-214ENST00000543225 CSPP1Q1MSJ5 1256 aa8.41□□□□□ -1.06
CCAR1-214ENST00000543225 SNX21Q969T3 373 aa8.41□□□□□ -1.06
CCAR1-214ENST00000543225 GJD4Q96KN9 370 aaPredicted RBP8.41□□□□□ -1.06
CCAR1-214ENST00000543225 STAC3Q96MF2 364 aa8.41□□□□□ -1.06
CCAR1-214ENST00000543225 SPATA31A3Q5VYP0 1347 aa8.41□□□□□ -1.06
CCAR1-214ENST00000543225 USP32Q8NFA0 1604 aa8.41□□□□□ -1.06
CCAR1-214ENST00000543225 SASS6Q6UVJ0 657 aa8.41□□□□□ -1.06
CCAR1-214ENST00000543225 CCDC146Q8IYE0 955 aa8.41□□□□□ -1.06
CCAR1-214ENST00000543225 ZRANB1Q9UGI0 708 aa8.41□□□□□ -1.06
CCAR1-214ENST00000543225 APAF1O14727 1248 aa8.4□□□□□ -1.06
CCAR1-214ENST00000543225 TNNT2P45379 298 aaPredicted RBP8.4□□□□□ -1.06
CCAR1-214ENST00000543225 PPP4R3BQ5MIZ7 849 aa8.4□□□□□ -1.06
CCAR1-214ENST00000543225 RWDD1Q9H446 243 aaPredicted RBP8.4□□□□□ -1.06
CCAR1-214ENST00000543225 KRT28Q7Z3Y7 464 aa8.4□□□□□ -1.07
CCAR1-214ENST00000543225 CCDC125Q86Z20 511 aa8.4□□□□□ -1.07
CCAR1-214ENST00000543225 SIRT1Q96EB6 747 aa8.4□□□□□ -1.07
CCAR1-214ENST00000543225 TESK2Q96S53 571 aa8.4□□□□□ -1.07
CCAR1-214ENST00000543225 GTPBP4Q9BZE4 634 aaKnown RBP8.4□□□□□ -1.07
CCAR1-214ENST00000543225 IBTKQ9P2D0 1353 aaPredicted RBP8.4□□□□□ -1.07
CCAR1-214ENST00000543225 NWD2Q9ULI1 1742 aa8.39□□□□□ -1.07
CCAR1-214ENST00000543225 GLI3P10071 1580 aa8.39□□□□□ -1.07
CCAR1-214ENST00000543225 SLIT2O94813 1529 aa8.39□□□□□ -1.07
CCAR1-214ENST00000543225 HSP90AB1P08238 724 aaKnown RBP8.39□□□□□ -1.07
CCAR1-214ENST00000543225 UNC5CLQ8IV45 518 aa8.39□□□□□ -1.07
CCAR1-214ENST00000543225 PDLIM2Q96JY6 352 aa8.39□□□□□ -1.07
CCAR1-214ENST00000543225 C14orf93Q9H972 538 aaKnown RBP8.39□□□□□ -1.07
CCAR1-214ENST00000543225 ZKSCAN5Q9Y2L8 839 aa8.39□□□□□ -1.07
CCAR1-214ENST00000543225 ABCA3Q99758 1704 aa8.39□□□□□ -1.07
CCAR1-214ENST00000543225 PLCH1Q4KWH8 1693 aa8.39□□□□□ -1.07
CCAR1-214ENST00000543225 KIF20AO95235 890 aa8.39□□□□□ -1.07
CCAR1-214ENST00000543225 HAP1P54257 671 aaPredicted RBP8.39□□□□□ -1.07
CCAR1-214ENST00000543225 KLHL40Q2TBA0 621 aa8.39□□□□□ -1.07
CCAR1-214ENST00000543225 NBPF1Q3BBV0 1214 aa8.39□□□□□ -1.07
CCAR1-214ENST00000543225 FBXO3Q9UK99 471 aa8.39□□□□□ -1.07
CCAR1-214ENST00000543225 PHF8Q9UPP1 1060 aa8.39□□□□□ -1.07
CCAR1-214ENST00000543225 DDX49Q9Y6V7 483 aaKnown RBP8.39□□□□□ -1.07
CCAR1-214ENST00000543225 NRXN1Q9ULB1 1477 aa8.39□□□□□ -1.07
CCAR1-214ENST00000543225 GOLGA6L22H0YM25 854 aa8.38□□□□□ -1.07
CCAR1-214ENST00000543225 MCM5P33992 734 aa8.38□□□□□ -1.07
CCAR1-214ENST00000543225 ZNF445P59923 1031 aa8.38□□□□□ -1.07
CCAR1-214ENST00000543225 PSME1Q06323 249 aa8.38□□□□□ -1.07
CCAR1-214ENST00000543225 CFAP70Q5T0N1 1121 aa8.38□□□□□ -1.07
CCAR1-214ENST00000543225 TNS3Q68CZ2 1445 aa8.38□□□□□ -1.07
CCAR1-214ENST00000543225 TMF1P82094 1093 aa8.38□□□□□ -1.07
CCAR1-214ENST00000543225 NAP1L2Q9ULW6 460 aaPredicted RBP8.38□□□□□ -1.07
CCAR1-214ENST00000543225 KNSTRNQ9Y448 316 aa8.38□□□□□ -1.07
CCAR1-214ENST00000543225 RBM25P49756 843 aaKnown RBP8.37□□□□□ -1.07
CCAR1-214ENST00000543225 SAFB2Q14151 953 aaKnown RBP eCLIP8.37□□□□□ -1.07
CCAR1-214ENST00000543225 DEFB132Q7Z7B7 95 aa8.37□□□□□ -1.07
CCAR1-214ENST00000543225 LETM1O95202 739 aaPredicted RBP8.37□□□□□ -1.07
CCAR1-214ENST00000543225 RLBP1P12271 317 aa8.37□□□□□ -1.07
CCAR1-214ENST00000543225 LMOD2Q6P5Q4 547 aa8.37□□□□□ -1.07
CCAR1-214ENST00000543225 PRAM1Q96QH2 718 aa8.37□□□□□ -1.07
CCAR1-214ENST00000543225 RBSNQ9H1K0 784 aa8.37□□□□□ -1.07
CCAR1-214ENST00000543225 DLC1Q96QB1 1528 aa8.36□□□□□ -1.07
CCAR1-214ENST00000543225 SSFA2P28290 1259 aa8.36□□□□□ -1.07
CCAR1-214ENST00000543225 CLEC17AQ6ZS10 378 aa8.36□□□□□ -1.07
CCAR1-214ENST00000543225 CABLES1Q8TDN4 633 aa8.36□□□□□ -1.07
CCAR1-214ENST00000543225 FOXD4L1Q9NU39 408 aa8.36□□□□□ -1.07
CCAR1-214ENST00000543225 TNNQ9UQP3 1299 aa8.36□□□□□ -1.07
CCAR1-214ENST00000543225 SBNO1A3KN83 1393 aa8.36□□□□□ -1.07
CCAR1-214ENST00000543225 ARHGEF10O15013 1369 aa8.36□□□□□ -1.07
CCAR1-214ENST00000543225 GPRASP1Q5JY77 1395 aa8.36□□□□□ -1.07
CCAR1-214ENST00000543225 ADGRB2O60241 1585 aa8.36□□□□□ -1.07
CCAR1-214ENST00000543225 RARSP54136 660 aaKnown RBP8.35□□□□□ -1.07
CCAR1-214ENST00000543225 CBX1P83916 185 aa8.35□□□□□ -1.07
CCAR1-214ENST00000543225 TRPM3Q9HCF6 1732 aaPredicted RBP8.35□□□□□ -1.07
CCAR1-214ENST00000543225 DCAF8L1A6NGE4 600 aa8.35□□□□□ -1.07
CCAR1-214ENST00000543225 BAG4O95429 457 aaKnown RBP8.35□□□□□ -1.07
CCAR1-214ENST00000543225 NGEFQ8N5V2 710 aa8.35□□□□□ -1.07
CCAR1-214ENST00000543225 MYRIPQ8NFW9 859 aa8.35□□□□□ -1.07
CCAR1-214ENST00000543225 TMEM51Q9NW97 253 aa8.35□□□□□ -1.07
CCAR1-214ENST00000543225 ANKARQ7Z5J8 1434 aa8.35□□□□□ -1.07
CCAR1-214ENST00000543225 ALS2Q96Q42 1657 aa8.34□□□□□ -1.07
CCAR1-214ENST00000543225 VPS72Q15906 364 aa8.34□□□□□ -1.07
CCAR1-214ENST00000543225 CCDC39Q9UFE4 941 aa8.34□□□□□ -1.07
CCAR1-214ENST00000543225 CCDC9Q9Y3X0 531 aaKnown RBP8.34□□□□□ -1.07
CCAR1-214ENST00000543225 ZSCAN23Q3MJ62 389 aa8.34□□□□□ -1.07
CCAR1-214ENST00000543225 CAVIN1Q6NZI2 390 aaKnown RBP8.34□□□□□ -1.07
CCAR1-214ENST00000543225 SEPT12Q8IYM1 358 aa8.34□□□□□ -1.07
CCAR1-214ENST00000543225 ZNF710Q8N1W2 664 aa8.34□□□□□ -1.07
CCAR1-214ENST00000543225 CHMP4BQ9H444 224 aaKnown RBP8.34□□□□□ -1.07
CCAR1-214ENST00000543225 ADGRB1O14514 1584 aa8.34□□□□□ -1.07
CCAR1-214ENST00000543225 NRAPQ86VF7 1730 aa8.34□□□□□ -1.08
CCAR1-214ENST00000543225 SF3B2Q13435 895 aaKnown RBP8.33□□□□□ -1.08
CCAR1-214ENST00000543225 ITSN1Q15811 1721 aa8.33□□□□□ -1.08
CCAR1-214ENST00000543225 PSDA5PKW4 1024 aaPredicted RBP8.33□□□□□ -1.08
CCAR1-214ENST00000543225 ONECUT3O60422 494 aaPredicted RBP8.33□□□□□ -1.08
CCAR1-214ENST00000543225 PRIM1P49642 420 aaKnown RBP8.33□□□□□ -1.08
CCAR1-214ENST00000543225 WWC1Q8IX03 1113 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms