RNA–Protein interactions for RNA: ENST00000543114.1

CACNA1C-230, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-230ENST00000543114 NBPF6Q5VWK0 638 aa27.39■■□□□ 1.98
CACNA1C-230ENST00000543114 USHBP1Q8N6Y0 703 aa27.39■■□□□ 1.98
CACNA1C-230ENST00000543114 NBPF4Q96M43 638 aa27.39■■□□□ 1.98
CACNA1C-230ENST00000543114 ANKRD26Q9UPS8 1709 aa27.38■■□□□ 1.97
CACNA1C-230ENST00000543114 FLT4P35916 1363 aa27.37■■□□□ 1.97
CACNA1C-230ENST00000543114 CARD14Q9BXL6 1004 aa27.37■■□□□ 1.97
CACNA1C-230ENST00000543114 MTFR1LQ9H019 292 aa27.37■■□□□ 1.97
CACNA1C-230ENST00000543114 INSRP06213 1382 aa27.36■■□□□ 1.97
CACNA1C-230ENST00000543114 ZCRB1Q8TBF4 217 aaKnown RBP27.36■■□□□ 1.97
CACNA1C-230ENST00000543114 SYTL4Q96C24 671 aaPredicted RBP27.36■■□□□ 1.97
CACNA1C-230ENST00000543114 TIMELESSQ9UNS1 1208 aa27.36■■□□□ 1.97
CACNA1C-230ENST00000543114 HSP90AB2PQ58FF8 381 aa27.35■■□□□ 1.97
CACNA1C-230ENST00000543114 SGIP1Q9BQI5 828 aa27.35■■□□□ 1.97
CACNA1C-230ENST00000543114 CLSPNQ9HAW4 1339 aa27.35■■□□□ 1.97
CACNA1C-230ENST00000543114 KIF24Q5T7B8 1368 aa27.35■■□□□ 1.97
CACNA1C-230ENST00000543114 PRIM1P49642 420 aaKnown RBP27.34■■□□□ 1.97
CACNA1C-230ENST00000543114 SLC27A3Q5K4L6 730 aa27.32■■□□□ 1.96
CACNA1C-230ENST00000543114 AKT1S1Q96B36 256 aa27.32■■□□□ 1.96
CACNA1C-230ENST00000543114 PCGF6Q9BYE7 350 aa27.32■■□□□ 1.96
CACNA1C-230ENST00000543114 CGNL1Q0VF96 1302 aa27.31■■□□□ 1.96
CACNA1C-230ENST00000543114 UTRNP46939 3433 aa27.31■■□□□ 1.96
CACNA1C-230ENST00000543114 PKD1L3Q7Z443 1732 aa27.3■■□□□ 1.96
CACNA1C-230ENST00000543114 KCNQ4P56696 695 aa27.3■■□□□ 1.96
CACNA1C-230ENST00000543114 RAPGEF4Q8WZA2 1011 aa27.3■■□□□ 1.96
CACNA1C-230ENST00000543114 EMILIN1Q9Y6C2 1016 aa27.3■■□□□ 1.96
CACNA1C-230ENST00000543114 YY1P25490 414 aa27.29■■□□□ 1.96
CACNA1C-230ENST00000543114 FHDC1Q9C0D6 1143 aaPredicted RBP27.29■■□□□ 1.96
CACNA1C-230ENST00000543114 COL24A1Q17RW2 1714 aa27.29■■□□□ 1.96
CACNA1C-230ENST00000543114 TOGARAM1Q9Y4F4 1720 aa27.29■■□□□ 1.96
CACNA1C-230ENST00000543114 MAP2P11137 1827 aaKnown RBP27.27■■□□□ 1.96
CACNA1C-230ENST00000543114 TATP17735 454 aaPredicted RBP27.27■■□□□ 1.96
CACNA1C-230ENST00000543114 NCAPD2Q15021 1401 aa27.26■■□□□ 1.95
CACNA1C-230ENST00000543114 PNPLA7Q6ZV29 1317 aa27.26■■□□□ 1.95
CACNA1C-230ENST00000543114 DCAF8L1A6NGE4 600 aa27.26■■□□□ 1.95
CACNA1C-230ENST00000543114 PCDH11XQ9BZA7 1347 aa27.25■■□□□ 1.95
CACNA1C-230ENST00000543114 PCDH11YQ9BZA8 1340 aa27.25■■□□□ 1.95
CACNA1C-230ENST00000543114 SYT17Q9BSW7 474 aa27.25■■□□□ 1.95
CACNA1C-230ENST00000543114 C5P01031 1676 aa27.24■■□□□ 1.95
CACNA1C-230ENST00000543114 ITGB4P16144 1822 aa27.23■■□□□ 1.95
CACNA1C-230ENST00000543114 ARXQ96QS3 562 aa27.23■■□□□ 1.95
CACNA1C-230ENST00000543114 CCNL1Q9UK58 526 aaPredicted RBP27.22■■□□□ 1.95
CACNA1C-230ENST00000543114 MAP3K5Q99683 1374 aa27.21■■□□□ 1.95
CACNA1C-230ENST00000543114 TAF1LQ8IZX4 1826 aa27.2■■□□□ 1.95
CACNA1C-230ENST00000543114 PPM1GO15355 546 aaPredicted RBP27.2■■□□□ 1.94
CACNA1C-230ENST00000543114 CYP27B1O15528 508 aa27.2■■□□□ 1.94
CACNA1C-230ENST00000543114 TFCP2L1Q9NZI6 479 aa27.2■■□□□ 1.94
CACNA1C-230ENST00000543114 POLR3GLQ9BT43 218 aa27.19■■□□□ 1.94
CACNA1C-230ENST00000543114 SLC16A10Q8TF71 515 aa27.18■■□□□ 1.94
CACNA1C-230ENST00000543114 WASHC2AQ641Q2 1341 aa27.16■■□□□ 1.94
CACNA1C-230ENST00000543114 PALLDQ8WX93 1383 aa27.15■■□□□ 1.94
CACNA1C-230ENST00000543114 POLKQ9UBT6 870 aa27.14■■□□□ 1.94
CACNA1C-230ENST00000543114 CHD4Q14839 1912 aa27.14■■□□□ 1.93
CACNA1C-230ENST00000543114 HSPA5P11021 654 aaKnown RBP27.13■■□□□ 1.93
CACNA1C-230ENST00000543114 EIF4G2P78344 907 aaKnown RBP eCLIP27.13■■□□□ 1.93
CACNA1C-230ENST00000543114 GOLGB1Q14789 3259 aaKnown RBP27.13■■□□□ 1.93
CACNA1C-230ENST00000543114 MPRIPQ6WCQ1 1025 aa27.12■■□□□ 1.93
CACNA1C-230ENST00000543114 EYA1Q99502 592 aa27.12■■□□□ 1.93
CACNA1C-230ENST00000543114 POLD1P28340 1107 aa27.11■■□□□ 1.93
CACNA1C-230ENST00000543114 C4BP0C0L5 1744 aa27.1■■□□□ 1.93
CACNA1C-230ENST00000543114 TNNT2P45379 298 aaPredicted RBP27.09■■□□□ 1.93
CACNA1C-230ENST00000543114 COL23A1Q86Y22 540 aaPredicted RBP27.08■■□□□ 1.93
CACNA1C-230ENST00000543114 KLHL34Q8N239 644 aa27.08■■□□□ 1.93
CACNA1C-230ENST00000543114 EIF4A2Q14240 407 aaKnown RBP27.07■■□□□ 1.92
CACNA1C-230ENST00000543114 NKX1-1Q15270 411 aaPredicted RBP27.07■■□□□ 1.92
CACNA1C-230ENST00000543114 SPG7Q9UQ90 795 aa27.07■■□□□ 1.92
CACNA1C-230ENST00000543114 UBR3Q6ZT12 1888 aa27.06■■□□□ 1.92
CACNA1C-230ENST00000543114 CCER1Q8TC90 406 aaPredicted RBP27.06■■□□□ 1.92
CACNA1C-230ENST00000543114 MSH5O43196 834 aa27.05■■□□□ 1.92
CACNA1C-230ENST00000543114 PIGBQ92521 554 aa27.05■■□□□ 1.92
CACNA1C-230ENST00000543114 PANK3Q9H999 370 aa27.05■■□□□ 1.92
CACNA1C-230ENST00000543114 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.04■■□□□ 1.92
CACNA1C-230ENST00000543114 MSL1Q68DK7 614 aa27.02■■□□□ 1.92
CACNA1C-230ENST00000543114 NLGN2Q8NFZ4 835 aa27.02■■□□□ 1.92
CACNA1C-230ENST00000543114 SMARCC1Q92922 1105 aaPredicted RBP27.02■■□□□ 1.92
CACNA1C-230ENST00000543114 IGSF1Q8N6C5 1336 aa27.01■■□□□ 1.91
CACNA1C-230ENST00000543114 PHKG2P15735 406 aa27■■□□□ 1.91
CACNA1C-230ENST00000543114 PLEKHG2Q9H7P9 1386 aa26.99■■□□□ 1.91
CACNA1C-230ENST00000543114 AMIGO3Q86WK7 504 aa26.99■■□□□ 1.91
CACNA1C-230ENST00000543114 ZNF784Q8NCA9 323 aaPredicted RBP26.99■■□□□ 1.91
CACNA1C-230ENST00000543114 GPR162Q16538 588 aa26.98■■□□□ 1.91
CACNA1C-230ENST00000543114 IFNL2Q8IZJ0 200 aa26.98■■□□□ 1.91
CACNA1C-230ENST00000543114 AK7Q96M32 723 aa26.97■■□□□ 1.91
CACNA1C-230ENST00000543114 TMOD3Q9NYL9 352 aa26.97■■□□□ 1.91
CACNA1C-230ENST00000543114 LOC102724428A0A0B4J2F2 783 aa26.95■■□□□ 1.9
CACNA1C-230ENST00000543114 HMGB2P26583 209 aaKnown RBP26.95■■□□□ 1.9
CACNA1C-230ENST00000543114 SIK1P57059 783 aa26.95■■□□□ 1.9
CACNA1C-230ENST00000543114 FLAD1Q8NFF5 587 aa26.95■■□□□ 1.9
CACNA1C-230ENST00000543114 ASAP1Q9ULH1 1129 aa26.95■■□□□ 1.9
CACNA1C-230ENST00000543114 SMIM5Q71RC9 77 aa26.94■■□□□ 1.9
CACNA1C-230ENST00000543114 PELP1Q8IZL8 1130 aaKnown RBP26.94■■□□□ 1.9
CACNA1C-230ENST00000543114 LINC00116Q8NCU8 138 aa26.94■■□□□ 1.9
CACNA1C-230ENST00000543114 PHF14O94880 888 aa26.93■■□□□ 1.9
CACNA1C-230ENST00000543114 ITPK1Q13572 414 aa26.91■■□□□ 1.9
CACNA1C-230ENST00000543114 MORC1Q86VD1 984 aa26.91■■□□□ 1.9
CACNA1C-230ENST00000543114 KDRP35968 1356 aa26.91■■□□□ 1.9
CACNA1C-230ENST00000543114 KDM6AO15550 1401 aaPredicted RBP26.9■■□□□ 1.9
CACNA1C-230ENST00000543114 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.9■■□□□ 1.9
CACNA1C-230ENST00000543114 ATG3Q9NT62 314 aa26.9■■□□□ 1.9
CACNA1C-230ENST00000543114 ZNF831Q5JPB2 1677 aa26.89■■□□□ 1.9
CACNA1C-230ENST00000543114 COL5A3P25940 1745 aaPredicted RBP26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms