RNA–Protein interactions for RNA: ENST00000543093.1

CSF1R-209, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best) BASIC

Gene CSF1R, Length 921 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-209ENST00000543093 TMF1P82094 1093 aa21.7■■□□□ 1.06
CSF1R-209ENST00000543093 SLC27A3Q5K4L6 730 aa21.7■■□□□ 1.06
CSF1R-209ENST00000543093 KIF20BQ96Q89 1820 aa21.7■■□□□ 1.06
CSF1R-209ENST00000543093 RTL1A6NKG5 1358 aa21.7■■□□□ 1.06
CSF1R-209ENST00000543093 RRS1Q15050 365 aaKnown RBP21.69■■□□□ 1.06
CSF1R-209ENST00000543093 ZCRB1Q8TBF4 217 aaKnown RBP21.69■■□□□ 1.06
CSF1R-209ENST00000543093 AKT1S1Q96B36 256 aa21.69■■□□□ 1.06
CSF1R-209ENST00000543093 GGNBP2Q9H3C7 697 aa21.69■■□□□ 1.06
CSF1R-209ENST00000543093 USP47Q96K76 1375 aa21.69■■□□□ 1.06
CSF1R-209ENST00000543093 FYB1O15117 783 aa21.68■■□□□ 1.06
CSF1R-209ENST00000543093 NSD2O96028 1365 aa21.67■■□□□ 1.06
CSF1R-209ENST00000543093 KCNQ4P56696 695 aa21.67■■□□□ 1.06
CSF1R-209ENST00000543093 NBPF6Q5VWK0 638 aa21.66■■□□□ 1.06
CSF1R-209ENST00000543093 USHBP1Q8N6Y0 703 aa21.66■■□□□ 1.06
CSF1R-209ENST00000543093 NBPF4Q96M43 638 aa21.66■■□□□ 1.06
CSF1R-209ENST00000543093 SMG6Q86US8 1419 aaKnown RBP21.65■■□□□ 1.06
CSF1R-209ENST00000543093 CHD4Q14839 1912 aa21.65■■□□□ 1.06
CSF1R-209ENST00000543093 PNPLA7Q6ZV29 1317 aa21.65■■□□□ 1.06
CSF1R-209ENST00000543093 COL24A1Q17RW2 1714 aa21.65■■□□□ 1.06
CSF1R-209ENST00000543093 MAP3K5Q99683 1374 aa21.64■■□□□ 1.06
CSF1R-209ENST00000543093 TFCP2L1Q9NZI6 479 aa21.64■■□□□ 1.05
CSF1R-209ENST00000543093 SLC16A10Q8TF71 515 aa21.63■■□□□ 1.05
CSF1R-209ENST00000543093 TIMELESSQ9UNS1 1208 aa21.63■■□□□ 1.05
CSF1R-209ENST00000543093 RAPGEF4Q8WZA2 1011 aa21.62■■□□□ 1.05
CSF1R-209ENST00000543093 CGNL1Q0VF96 1302 aa21.61■■□□□ 1.05
CSF1R-209ENST00000543093 KLHL34Q8N239 644 aa21.61■■□□□ 1.05
CSF1R-209ENST00000543093 CCNL1Q9UK58 526 aaPredicted RBP21.61■■□□□ 1.05
CSF1R-209ENST00000543093 INSRP06213 1382 aa21.61■■□□□ 1.05
CSF1R-209ENST00000543093 TATP17735 454 aaPredicted RBP21.6■■□□□ 1.05
CSF1R-209ENST00000543093 POLD1P28340 1107 aa21.6■■□□□ 1.05
CSF1R-209ENST00000543093 CDCA8Q53HL2 280 aa21.6■■□□□ 1.05
CSF1R-209ENST00000543093 HSP90AB2PQ58FF8 381 aa21.6■■□□□ 1.05
CSF1R-209ENST00000543093 ZNF784Q8NCA9 323 aaPredicted RBP21.59■■□□□ 1.05
CSF1R-209ENST00000543093 FLT4P35916 1363 aa21.59■■□□□ 1.05
CSF1R-209ENST00000543093 C5P01031 1676 aa21.57■■□□□ 1.04
CSF1R-209ENST00000543093 CCER1Q8TC90 406 aaPredicted RBP21.57■■□□□ 1.04
CSF1R-209ENST00000543093 GPR162Q16538 588 aa21.56■■□□□ 1.04
CSF1R-209ENST00000543093 CARD14Q9BXL6 1004 aa21.56■■□□□ 1.04
CSF1R-209ENST00000543093 KIF24Q5T7B8 1368 aa21.56■■□□□ 1.04
CSF1R-209ENST00000543093 PCDH11XQ9BZA7 1347 aa21.55■■□□□ 1.04
CSF1R-209ENST00000543093 PCDH11YQ9BZA8 1340 aa21.55■■□□□ 1.04
CSF1R-209ENST00000543093 NSD3Q9BZ95 1437 aa21.55■■□□□ 1.04
CSF1R-209ENST00000543093 MSH5O43196 834 aa21.54■■□□□ 1.04
CSF1R-209ENST00000543093 ITGB4P16144 1822 aa21.54■■□□□ 1.04
CSF1R-209ENST00000543093 TOGARAM1Q9Y4F4 1720 aa21.54■■□□□ 1.04
CSF1R-209ENST00000543093 TAF1LQ8IZX4 1826 aa21.53■■□□□ 1.04
CSF1R-209ENST00000543093 PKD1L3Q7Z443 1732 aa21.53■■□□□ 1.04
CSF1R-209ENST00000543093 EMILIN1Q9Y6C2 1016 aa21.53■■□□□ 1.04
CSF1R-209ENST00000543093 ANKRD26Q9UPS8 1709 aa21.52■■□□□ 1.04
CSF1R-209ENST00000543093 COL23A1Q86Y22 540 aaPredicted RBP21.52■■□□□ 1.04
CSF1R-209ENST00000543093 PELP1Q8IZL8 1130 aaKnown RBP21.52■■□□□ 1.04
CSF1R-209ENST00000543093 MPRIPQ6WCQ1 1025 aa21.51■■□□□ 1.03
CSF1R-209ENST00000543093 NLGN2Q8NFZ4 835 aa21.51■■□□□ 1.03
CSF1R-209ENST00000543093 MAP2P11137 1827 aaKnown RBP21.5■■□□□ 1.03
CSF1R-209ENST00000543093 PALLDQ8WX93 1383 aa21.5■■□□□ 1.03
CSF1R-209ENST00000543093 CYP27B1O15528 508 aa21.5■■□□□ 1.03
CSF1R-209ENST00000543093 UTRNP46939 3433 aa21.49■■□□□ 1.03
CSF1R-209ENST00000543093 PPM1GO15355 546 aaPredicted RBP21.49■■□□□ 1.03
CSF1R-209ENST00000543093 MSL1Q68DK7 614 aa21.48■■□□□ 1.03
CSF1R-209ENST00000543093 NCAPD2Q15021 1401 aa21.47■■□□□ 1.03
CSF1R-209ENST00000543093 C4BP0C0L5 1744 aa21.46■■□□□ 1.03
CSF1R-209ENST00000543093 HMGB2P26583 209 aaKnown RBP21.44■■□□□ 1.02
CSF1R-209ENST00000543093 SMARCC1Q92922 1105 aaPredicted RBP21.44■■□□□ 1.02
CSF1R-209ENST00000543093 WASHC2AQ641Q2 1341 aa21.44■■□□□ 1.02
CSF1R-209ENST00000543093 FLAD1Q8NFF5 587 aa21.43■■□□□ 1.02
CSF1R-209ENST00000543093 SPG7Q9UQ90 795 aa21.43■■□□□ 1.02
CSF1R-209ENST00000543093 UBR3Q6ZT12 1888 aa21.43■■□□□ 1.02
CSF1R-209ENST00000543093 PIGBQ92521 554 aa21.42■■□□□ 1.02
CSF1R-209ENST00000543093 EYA1Q99502 592 aa21.42■■□□□ 1.02
CSF1R-209ENST00000543093 POLR3GLQ9BT43 218 aa21.42■■□□□ 1.02
CSF1R-209ENST00000543093 YBX3P16989 372 aaKnown RBP eCLIP21.41■■□□□ 1.02
CSF1R-209ENST00000543093 NKX1-1Q15270 411 aaPredicted RBP21.41■■□□□ 1.02
CSF1R-209ENST00000543093 AK7Q96M32 723 aa21.41■■□□□ 1.02
CSF1R-209ENST00000543093 POLKQ9UBT6 870 aa21.4■■□□□ 1.02
CSF1R-209ENST00000543093 C1QTNF8P60827 252 aa21.39■■□□□ 1.01
CSF1R-209ENST00000543093 GRIN3BO60391 1043 aa21.38■■□□□ 1.01
CSF1R-209ENST00000543093 PHF14O94880 888 aa21.38■■□□□ 1.01
CSF1R-209ENST00000543093 AMIGO3Q86WK7 504 aa21.38■■□□□ 1.01
CSF1R-209ENST00000543093 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.38■■□□□ 1.01
CSF1R-209ENST00000543093 TNNT2P45379 298 aaPredicted RBP21.37■■□□□ 1.01
CSF1R-209ENST00000543093 SMIM5Q71RC9 77 aa21.37■■□□□ 1.01
CSF1R-209ENST00000543093 TMOD3Q9NYL9 352 aa21.37■■□□□ 1.01
CSF1R-209ENST00000543093 LOC102724428A0A0B4J2F2 783 aa21.36■■□□□ 1.01
CSF1R-209ENST00000543093 SIK1P57059 783 aa21.36■■□□□ 1.01
CSF1R-209ENST00000543093 CD2APQ9Y5K6 639 aa21.36■■□□□ 1.01
CSF1R-209ENST00000543093 SENP3-EIF4A1A0A087X0R7 540 aa21.35■■□□□ 1.01
CSF1R-209ENST00000543093 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.35■■□□□ 1.01
CSF1R-209ENST00000543093 PHKG2P15735 406 aa21.35■■□□□ 1.01
CSF1R-209ENST00000543093 EIF4A2Q14240 407 aaKnown RBP21.35■■□□□ 1.01
CSF1R-209ENST00000543093 IFNL2Q8IZJ0 200 aa21.35■■□□□ 1.01
CSF1R-209ENST00000543093 LINC00116Q8NCU8 138 aa21.35■■□□□ 1.01
CSF1R-209ENST00000543093 GIGYF1O75420 1035 aaPredicted RBP21.34■■□□□ 1.01
CSF1R-209ENST00000543093 ASAP1Q9ULH1 1129 aa21.34■■□□□ 1.01
CSF1R-209ENST00000543093 SSFA2P28290 1259 aa21.32■■□□□ 1
CSF1R-209ENST00000543093 EIF4G2P78344 907 aaKnown RBP eCLIP21.32■■□□□ 1
CSF1R-209ENST00000543093 ATP6V1AP38606 617 aa21.31■■□□□ 1
CSF1R-209ENST00000543093 ITPK1Q13572 414 aa21.31■■□□□ 1
CSF1R-209ENST00000543093 GNPATO15228 680 aa21.3■■□□□ 1
CSF1R-209ENST00000543093 ATG3Q9NT62 314 aa21.3■■□□□ 1
CSF1R-209ENST00000543093 GOLGB1Q14789 3259 aaKnown RBP21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms