RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 PURBQ96QR8 312 aaKnown RBP8.07□□□□□ -1.12
MDM2-229ENST00000543046 PPP1R12CQ9BZL4 782 aa8.07□□□□□ -1.12
MDM2-229ENST00000543046 OSBPL3Q9H4L5 887 aa8.07□□□□□ -1.12
MDM2-229ENST00000543046 TFIP11Q9UBB9 837 aaKnown RBP8.07□□□□□ -1.12
MDM2-229ENST00000543046 PALM3A6NDB9 673 aaPredicted RBP8.06□□□□□ -1.12
MDM2-229ENST00000543046 LZTS3O60299 673 aaPredicted RBP8.06□□□□□ -1.12
MDM2-229ENST00000543046 BMP2P12643 396 aa8.06□□□□□ -1.12
MDM2-229ENST00000543046 RELBQ01201 579 aa8.06□□□□□ -1.12
MDM2-229ENST00000543046 NCOA4Q13772 614 aa8.06□□□□□ -1.12
MDM2-229ENST00000543046 EML3Q32P44 896 aa8.06□□□□□ -1.12
MDM2-229ENST00000543046 C6orf118Q5T5N4 469 aa8.06□□□□□ -1.12
MDM2-229ENST00000543046 CYP2U1Q7Z449 544 aa8.06□□□□□ -1.12
MDM2-229ENST00000543046 DEPDC4Q8N2C3 294 aa8.06□□□□□ -1.12
MDM2-229ENST00000543046 GMPR2Q9P2T1 348 aaKnown RBP8.06□□□□□ -1.12
MDM2-229ENST00000543046 USP17L3A6NCW0 530 aa8.05□□□□□ -1.12
MDM2-229ENST00000543046 USP17L4A6NCW7 530 aa8.05□□□□□ -1.12
MDM2-229ENST00000543046 ATP5J2-PTCD1G3V325 749 aa8.05□□□□□ -1.12
MDM2-229ENST00000543046 USP17L2Q6R6M4 530 aa8.05□□□□□ -1.12
MDM2-229ENST00000543046 USP17L1Q7RTZ2 530 aa8.05□□□□□ -1.12
MDM2-229ENST00000543046 PLEKHM2Q8IWE5 1019 aa8.05□□□□□ -1.12
MDM2-229ENST00000543046 KDF1Q8NAX2 398 aaPredicted RBP8.05□□□□□ -1.12
MDM2-229ENST00000543046 ZFP42Q96MM3 310 aa8.05□□□□□ -1.12
MDM2-229ENST00000543046 MAFBQ9Y5Q3 323 aaPredicted RBP8.05□□□□□ -1.12
MDM2-229ENST00000543046 PTGIRP43119 386 aa8.04□□□□□ -1.12
MDM2-229ENST00000543046 ZNF395Q9H8N7 513 aaPredicted RBP8.04□□□□□ -1.12
MDM2-229ENST00000543046 SENP2Q9HC62 589 aa8.04□□□□□ -1.12
MDM2-229ENST00000543046 SPINT1O43278 529 aa8.03□□□□□ -1.12
MDM2-229ENST00000543046 NOD1Q9Y239 953 aa8.03□□□□□ -1.12
MDM2-229ENST00000543046 POTECB2RU33 542 aa8.02□□□□□ -1.13
MDM2-229ENST00000543046 LMOD1P29536 600 aaPredicted RBP8.02□□□□□ -1.13
MDM2-229ENST00000543046 KIFC2Q96AC6 838 aa8.02□□□□□ -1.13
MDM2-229ENST00000543046 TRIM47Q96LD4 638 aa8.02□□□□□ -1.13
MDM2-229ENST00000543046 C1orf115Q9H7X2 142 aa8.02□□□□□ -1.13
MDM2-229ENST00000543046 GNRH1P01148 92 aa8.01□□□□□ -1.13
MDM2-229ENST00000543046 CFAP70Q5T0N1 1121 aa8.01□□□□□ -1.13
MDM2-229ENST00000543046 CCDC97Q96F63 343 aaPredicted RBP8.01□□□□□ -1.13
MDM2-229ENST00000543046 INSM2Q96T92 566 aaPredicted RBP8.01□□□□□ -1.13
MDM2-229ENST00000543046 ARHGEF10LQ9HCE6 1279 aa8.01□□□□□ -1.13
MDM2-229ENST00000543046 A0A1W2PRU2 124 aa8□□□□□ -1.13
MDM2-229ENST00000543046 C11orf95C9JLR9 678 aaPredicted RBP8□□□□□ -1.13
MDM2-229ENST00000543046 SUPT5HO00267 1087 aaKnown RBP8□□□□□ -1.13
MDM2-229ENST00000543046 GTF2IP78347 998 aa8□□□□□ -1.13
MDM2-229ENST00000543046 CCDC82Q8N4S0 544 aa8□□□□□ -1.13
MDM2-229ENST00000543046 POLMQ9NP87 494 aaPredicted RBP8□□□□□ -1.13
MDM2-229ENST00000543046 RAB6BQ9NRW1 208 aa8□□□□□ -1.13
MDM2-229ENST00000543046 MKRN1Q9UHC7 482 aaKnown RBP8□□□□□ -1.13
MDM2-229ENST00000543046 SERPINA10Q9UK55 444 aa8□□□□□ -1.13
MDM2-229ENST00000543046 PCDHGA11Q9Y5H2 935 aa8□□□□□ -1.13
MDM2-229ENST00000543046 SOS2Q07890 1332 aaPredicted RBP8□□□□□ -1.13
MDM2-229ENST00000543046 MEN1O00255 615 aa7.99□□□□□ -1.13
MDM2-229ENST00000543046 CTSOP43234 321 aaPredicted RBP7.99□□□□□ -1.13
MDM2-229ENST00000543046 ZNF787Q6DD87 383 aa7.99□□□□□ -1.13
MDM2-229ENST00000543046 TRIM50Q86XT4 487 aa7.99□□□□□ -1.13
MDM2-229ENST00000543046 TTLL8A6PVC2 850 aa7.98□□□□□ -1.13
MDM2-229ENST00000543046 STAU1O95793 577 aaKnown RBP7.98□□□□□ -1.13
MDM2-229ENST00000543046 SNRPBP14678 240 aaKnown RBP7.98□□□□□ -1.13
MDM2-229ENST00000543046 RFX1P22670 979 aa7.98□□□□□ -1.13
MDM2-229ENST00000543046 CLN3Q13286 438 aa7.98□□□□□ -1.13
MDM2-229ENST00000543046 IL2RAP01589 272 aa7.97□□□□□ -1.13
MDM2-229ENST00000543046 ATP1A2P50993 1020 aa7.97□□□□□ -1.13
MDM2-229ENST00000543046 SCNN1DP51172 638 aa7.97□□□□□ -1.13
MDM2-229ENST00000543046 CLDN10P78369 228 aa7.97□□□□□ -1.13
MDM2-229ENST00000543046 PSME1Q06323 249 aa7.97□□□□□ -1.13
MDM2-229ENST00000543046 ESCO1Q5FWF5 840 aa7.97□□□□□ -1.13
MDM2-229ENST00000543046 KANK4Q5T7N3 995 aaPredicted RBP7.97□□□□□ -1.13
MDM2-229ENST00000543046 FOXD4L5Q5VV16 416 aaPredicted RBP7.97□□□□□ -1.13
MDM2-229ENST00000543046 OGFOD1Q8N543 542 aa7.97□□□□□ -1.13
MDM2-229ENST00000543046 CNKSR1Q969H4 720 aa7.97□□□□□ -1.13
MDM2-229ENST00000543046 NLRP3Q96P20 1036 aa7.97□□□□□ -1.13
MDM2-229ENST00000543046 ETNK1Q9HBU6 452 aa7.97□□□□□ -1.13
MDM2-229ENST00000543046 SOBPA7XYQ1 873 aa7.96□□□□□ -1.14
MDM2-229ENST00000543046 GDF10P55107 478 aa7.96□□□□□ -1.14
MDM2-229ENST00000543046 ESYT1Q9BSJ8 1104 aa7.96□□□□□ -1.14
MDM2-229ENST00000543046 VRTNQ9H8Y1 702 aa7.96□□□□□ -1.14
MDM2-229ENST00000543046 DNAAF2Q9NVR5 837 aaKnown RBP7.96□□□□□ -1.14
MDM2-229ENST00000543046 DNMT3LQ9UJW3 386 aa7.96□□□□□ -1.14
MDM2-229ENST00000543046 KIAA1024Q9UPX6 916 aa7.96□□□□□ -1.14
MDM2-229ENST00000543046 FIGNL2A6NMB9 653 aa7.95□□□□□ -1.14
MDM2-229ENST00000543046 TMEM229AB2RXF0 380 aa7.95□□□□□ -1.14
MDM2-229ENST00000543046 ZBTB7BO15156 539 aaPredicted RBP7.95□□□□□ -1.14
MDM2-229ENST00000543046 MAN1A2O60476 641 aa7.95□□□□□ -1.14
MDM2-229ENST00000543046 INHAP05111 366 aa7.95□□□□□ -1.14
MDM2-229ENST00000543046 RASA1P20936 1047 aa7.95□□□□□ -1.14
MDM2-229ENST00000543046 GPC1P35052 558 aa7.95□□□□□ -1.14
MDM2-229ENST00000543046 RNF144AP50876 292 aaPredicted RBP7.95□□□□□ -1.14
MDM2-229ENST00000543046 RNF217Q8TC41 542 aa7.95□□□□□ -1.14
MDM2-229ENST00000543046 XAGE2Q96GT9 111 aa7.95□□□□□ -1.14
MDM2-229ENST00000543046 WASLO00401 505 aaPredicted RBP7.94□□□□□ -1.14
MDM2-229ENST00000543046 CCDC102BQ68D86 513 aa7.94□□□□□ -1.14
MDM2-229ENST00000543046 LARGE2Q8N3Y3 721 aa7.94□□□□□ -1.14
MDM2-229ENST00000543046 HRH3Q9Y5N1 445 aa7.94□□□□□ -1.14
MDM2-229ENST00000543046 CENPCQ03188 943 aa7.93□□□□□ -1.14
MDM2-229ENST00000543046 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.93□□□□□ -1.14
MDM2-229ENST00000543046 CRTC2Q53ET0 693 aaPredicted RBP7.93□□□□□ -1.14
MDM2-229ENST00000543046 CDCA8Q53HL2 280 aa7.93□□□□□ -1.14
MDM2-229ENST00000543046 LARP1Q6PKG0 1096 aaKnown RBP7.93□□□□□ -1.14
MDM2-229ENST00000543046 SIX5Q8N196 739 aa7.93□□□□□ -1.14
MDM2-229ENST00000543046 TPCN2Q8NHX9 752 aa7.93□□□□□ -1.14
MDM2-229ENST00000543046 ZNF594Q96JF6 807 aaPredicted RBP7.93□□□□□ -1.14
MDM2-229ENST00000543046 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms