RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-219ENST00000542848 CDCA8Q53HL2 280 aa16.59■□□□□ 0.25
PTPN6-219ENST00000542848 SYT17Q9BSW7 474 aa16.58■□□□□ 0.24
PTPN6-219ENST00000542848 MAP2P11137 1827 aaKnown RBP16.58■□□□□ 0.24
PTPN6-219ENST00000542848 CGNL1Q0VF96 1302 aa16.57■□□□□ 0.24
PTPN6-219ENST00000542848 PRIM1P49642 420 aaKnown RBP16.57■□□□□ 0.24
PTPN6-219ENST00000542848 ZNF827Q17R98 1081 aa16.57■□□□□ 0.24
PTPN6-219ENST00000542848 FHDC1Q9C0D6 1143 aaPredicted RBP16.57■□□□□ 0.24
PTPN6-219ENST00000542848 GGNBP2Q9H3C7 697 aa16.57■□□□□ 0.24
PTPN6-219ENST00000542848 UTRNP46939 3433 aa16.57■□□□□ 0.24
PTPN6-219ENST00000542848 MEGF6O75095 1541 aa16.56■□□□□ 0.24
PTPN6-219ENST00000542848 RRS1Q15050 365 aaKnown RBP16.56■□□□□ 0.24
PTPN6-219ENST00000542848 NBPF6Q5VWK0 638 aa16.56■□□□□ 0.24
PTPN6-219ENST00000542848 SLC16A10Q8TF71 515 aa16.56■□□□□ 0.24
PTPN6-219ENST00000542848 AKT1S1Q96B36 256 aa16.56■□□□□ 0.24
PTPN6-219ENST00000542848 NBPF4Q96M43 638 aa16.56■□□□□ 0.24
PTPN6-219ENST00000542848 ARXQ96QS3 562 aa16.56■□□□□ 0.24
PTPN6-219ENST00000542848 SYTL4Q96C24 671 aaPredicted RBP16.55■□□□□ 0.24
PTPN6-219ENST00000542848 SMG6Q86US8 1419 aaKnown RBP16.54■□□□□ 0.24
PTPN6-219ENST00000542848 ITGB4P16144 1822 aa16.54■□□□□ 0.24
PTPN6-219ENST00000542848 KIF24Q5T7B8 1368 aa16.54■□□□□ 0.24
PTPN6-219ENST00000542848 NSD2O96028 1365 aa16.53■□□□□ 0.24
PTPN6-219ENST00000542848 INSRP06213 1382 aa16.53■□□□□ 0.24
PTPN6-219ENST00000542848 MAP3K5Q99683 1374 aa16.53■□□□□ 0.24
PTPN6-219ENST00000542848 RAPGEF4Q8WZA2 1011 aa16.53■□□□□ 0.24
PTPN6-219ENST00000542848 TIMELESSQ9UNS1 1208 aa16.53■□□□□ 0.24
PTPN6-219ENST00000542848 TAF1LQ8IZX4 1826 aa16.53■□□□□ 0.24
PTPN6-219ENST00000542848 HSP90AB2PQ58FF8 381 aa16.52■□□□□ 0.24
PTPN6-219ENST00000542848 FLT4P35916 1363 aa16.51■□□□□ 0.23
PTPN6-219ENST00000542848 TATP17735 454 aaPredicted RBP16.51■□□□□ 0.23
PTPN6-219ENST00000542848 USHBP1Q8N6Y0 703 aa16.51■□□□□ 0.23
PTPN6-219ENST00000542848 TFCP2L1Q9NZI6 479 aa16.51■□□□□ 0.23
PTPN6-219ENST00000542848 ANKRD26Q9UPS8 1709 aa16.5■□□□□ 0.23
PTPN6-219ENST00000542848 PNPLA7Q6ZV29 1317 aa16.5■□□□□ 0.23
PTPN6-219ENST00000542848 CARD14Q9BXL6 1004 aa16.5■□□□□ 0.23
PTPN6-219ENST00000542848 PKD1L3Q7Z443 1732 aa16.5■□□□□ 0.23
PTPN6-219ENST00000542848 C5P01031 1676 aa16.5■□□□□ 0.23
PTPN6-219ENST00000542848 HMGB2P26583 209 aaKnown RBP16.49■□□□□ 0.23
PTPN6-219ENST00000542848 POLD1P28340 1107 aa16.49■□□□□ 0.23
PTPN6-219ENST00000542848 KCNQ4P56696 695 aa16.49■□□□□ 0.23
PTPN6-219ENST00000542848 CCNL1Q9UK58 526 aaPredicted RBP16.49■□□□□ 0.23
PTPN6-219ENST00000542848 PCDH11XQ9BZA7 1347 aa16.47■□□□□ 0.23
PTPN6-219ENST00000542848 PCDH11YQ9BZA8 1340 aa16.47■□□□□ 0.23
PTPN6-219ENST00000542848 NSD3Q9BZ95 1437 aa16.46■□□□□ 0.23
PTPN6-219ENST00000542848 TOGARAM1Q9Y4F4 1720 aa16.46■□□□□ 0.23
PTPN6-219ENST00000542848 GOLGB1Q14789 3259 aaKnown RBP16.46■□□□□ 0.22
PTPN6-219ENST00000542848 CLSPNQ9HAW4 1339 aa16.45■□□□□ 0.22
PTPN6-219ENST00000542848 EMILIN1Q9Y6C2 1016 aa16.45■□□□□ 0.22
PTPN6-219ENST00000542848 NCAPD2Q15021 1401 aa16.44■□□□□ 0.22
PTPN6-219ENST00000542848 CYP27B1O15528 508 aa16.43■□□□□ 0.22
PTPN6-219ENST00000542848 COL23A1Q86Y22 540 aaPredicted RBP16.43■□□□□ 0.22
PTPN6-219ENST00000542848 ZNF784Q8NCA9 323 aaPredicted RBP16.43■□□□□ 0.22
PTPN6-219ENST00000542848 WASHC2AQ641Q2 1341 aa16.43■□□□□ 0.22
PTPN6-219ENST00000542848 UBR3Q6ZT12 1888 aa16.42■□□□□ 0.22
PTPN6-219ENST00000542848 GPR162Q16538 588 aa16.42■□□□□ 0.22
PTPN6-219ENST00000542848 MPRIPQ6WCQ1 1025 aa16.42■□□□□ 0.22
PTPN6-219ENST00000542848 PPM1GO15355 546 aaPredicted RBP16.41■□□□□ 0.22
PTPN6-219ENST00000542848 MSH5O43196 834 aa16.41■□□□□ 0.22
PTPN6-219ENST00000542848 NKX1-1Q15270 411 aaPredicted RBP16.41■□□□□ 0.22
PTPN6-219ENST00000542848 KLHL34Q8N239 644 aa16.41■□□□□ 0.22
PTPN6-219ENST00000542848 FLAD1Q8NFF5 587 aa16.41■□□□□ 0.22
PTPN6-219ENST00000542848 SMARCC1Q92922 1105 aaPredicted RBP16.41■□□□□ 0.22
PTPN6-219ENST00000542848 C4BP0C0L5 1744 aa16.41■□□□□ 0.22
PTPN6-219ENST00000542848 PALLDQ8WX93 1383 aa16.4■□□□□ 0.22
PTPN6-219ENST00000542848 SPG7Q9UQ90 795 aa16.4■□□□□ 0.22
PTPN6-219ENST00000542848 EYA1Q99502 592 aa16.39■□□□□ 0.21
PTPN6-219ENST00000542848 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.39■□□□□ 0.21
PTPN6-219ENST00000542848 POLKQ9UBT6 870 aa16.39■□□□□ 0.21
PTPN6-219ENST00000542848 NLGN2Q8NFZ4 835 aa16.37■□□□□ 0.21
PTPN6-219ENST00000542848 PIGBQ92521 554 aa16.37■□□□□ 0.21
PTPN6-219ENST00000542848 PCGF6Q9BYE7 350 aa16.37■□□□□ 0.21
PTPN6-219ENST00000542848 IFNL2Q8IZJ0 200 aa16.35■□□□□ 0.21
PTPN6-219ENST00000542848 PELP1Q8IZL8 1130 aaKnown RBP16.35■□□□□ 0.21
PTPN6-219ENST00000542848 PLEKHG2Q9H7P9 1386 aa16.35■□□□□ 0.21
PTPN6-219ENST00000542848 GRIN3BO60391 1043 aa16.34■□□□□ 0.21
PTPN6-219ENST00000542848 EIF4G2P78344 907 aaKnown RBP eCLIP16.34■□□□□ 0.21
PTPN6-219ENST00000542848 MSL1Q68DK7 614 aa16.34■□□□□ 0.21
PTPN6-219ENST00000542848 AK7Q96M32 723 aa16.34■□□□□ 0.21
PTPN6-219ENST00000542848 POLR3GLQ9BT43 218 aa16.34■□□□□ 0.21
PTPN6-219ENST00000542848 EIF4A2Q14240 407 aaKnown RBP16.33■□□□□ 0.2
PTPN6-219ENST00000542848 TMOD3Q9NYL9 352 aa16.33■□□□□ 0.2
PTPN6-219ENST00000542848 CD2APQ9Y5K6 639 aa16.33■□□□□ 0.2
PTPN6-219ENST00000542848 LOC102724428A0A0B4J2F2 783 aa16.32■□□□□ 0.2
PTPN6-219ENST00000542848 PHKG2P15735 406 aa16.32■□□□□ 0.2
PTPN6-219ENST00000542848 SIK1P57059 783 aa16.32■□□□□ 0.2
PTPN6-219ENST00000542848 ZNF831Q5JPB2 1677 aa16.32■□□□□ 0.2
PTPN6-219ENST00000542848 TNNT2P45379 298 aaPredicted RBP16.31■□□□□ 0.2
PTPN6-219ENST00000542848 HSPA5P11021 654 aaKnown RBP16.3■□□□□ 0.2
PTPN6-219ENST00000542848 YBX3P16989 372 aaKnown RBP eCLIP16.3■□□□□ 0.2
PTPN6-219ENST00000542848 SSFA2P28290 1259 aa16.3■□□□□ 0.2
PTPN6-219ENST00000542848 PANK3Q9H999 370 aa16.3■□□□□ 0.2
PTPN6-219ENST00000542848 ASAP1Q9ULH1 1129 aa16.3■□□□□ 0.2
PTPN6-219ENST00000542848 IGSF1Q8N6C5 1336 aa16.29■□□□□ 0.2
PTPN6-219ENST00000542848 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.29■□□□□ 0.2
PTPN6-219ENST00000542848 AMIGO3Q86WK7 504 aa16.29■□□□□ 0.2
PTPN6-219ENST00000542848 LINC00116Q8NCU8 138 aa16.29■□□□□ 0.2
PTPN6-219ENST00000542848 ERVV-2B6SEH9 535 aa16.28■□□□□ 0.2
PTPN6-219ENST00000542848 PHF14O94880 888 aa16.28■□□□□ 0.2
PTPN6-219ENST00000542848 ATP6V1AP38606 617 aa16.28■□□□□ 0.2
PTPN6-219ENST00000542848 C1QTNF8P60827 252 aa16.28■□□□□ 0.2
PTPN6-219ENST00000542848 ATG3Q9NT62 314 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms