RNA–Protein interactions for RNA: ENST00000542766.5

IFT43-203, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-203ENST00000542766 ZNF827Q17R98 1081 aa29.03■■■□□ 2.24
IFT43-203ENST00000542766 PCGF6Q9BYE7 350 aa29.03■■■□□ 2.24
IFT43-203ENST00000542766 NSD2O96028 1365 aa29.02■■■□□ 2.24
IFT43-203ENST00000542766 CDCA8Q53HL2 280 aa29.02■■■□□ 2.24
IFT43-203ENST00000542766 HSP90AB2PQ58FF8 381 aa29.02■■■□□ 2.24
IFT43-203ENST00000542766 TIMELESSQ9UNS1 1208 aa29.02■■■□□ 2.24
IFT43-203ENST00000542766 NSD3Q9BZ95 1437 aa29.02■■■□□ 2.24
IFT43-203ENST00000542766 ANKRD26Q9UPS8 1709 aa29.01■■■□□ 2.23
IFT43-203ENST00000542766 ZCRB1Q8TBF4 217 aaKnown RBP29.01■■■□□ 2.23
IFT43-203ENST00000542766 INSRP06213 1382 aa29■■■□□ 2.23
IFT43-203ENST00000542766 PRIM1P49642 420 aaKnown RBP28.99■■■□□ 2.23
IFT43-203ENST00000542766 SGIP1Q9BQI5 828 aa28.98■■■□□ 2.23
IFT43-203ENST00000542766 CLSPNQ9HAW4 1339 aa28.97■■■□□ 2.23
IFT43-203ENST00000542766 KCNQ4P56696 695 aa28.97■■■□□ 2.23
IFT43-203ENST00000542766 SYTL4Q96C24 671 aaPredicted RBP28.97■■■□□ 2.23
IFT43-203ENST00000542766 FLT4P35916 1363 aa28.97■■■□□ 2.23
IFT43-203ENST00000542766 MTFR1LQ9H019 292 aa28.96■■■□□ 2.23
IFT43-203ENST00000542766 EMILIN1Q9Y6C2 1016 aa28.96■■■□□ 2.23
IFT43-203ENST00000542766 SMG6Q86US8 1419 aaKnown RBP28.95■■■□□ 2.23
IFT43-203ENST00000542766 AKT1S1Q96B36 256 aa28.95■■■□□ 2.22
IFT43-203ENST00000542766 COL24A1Q17RW2 1714 aa28.94■■■□□ 2.22
IFT43-203ENST00000542766 ITGB4P16144 1822 aa28.94■■■□□ 2.22
IFT43-203ENST00000542766 TOGARAM1Q9Y4F4 1720 aa28.94■■■□□ 2.22
IFT43-203ENST00000542766 KIF24Q5T7B8 1368 aa28.93■■■□□ 2.22
IFT43-203ENST00000542766 PKD1L3Q7Z443 1732 aa28.93■■■□□ 2.22
IFT43-203ENST00000542766 SLC27A3Q5K4L6 730 aa28.91■■■□□ 2.22
IFT43-203ENST00000542766 RAPGEF4Q8WZA2 1011 aa28.91■■■□□ 2.22
IFT43-203ENST00000542766 UTRNP46939 3433 aa28.91■■■□□ 2.22
IFT43-203ENST00000542766 FHDC1Q9C0D6 1143 aaPredicted RBP28.9■■■□□ 2.22
IFT43-203ENST00000542766 CGNL1Q0VF96 1302 aa28.9■■■□□ 2.22
IFT43-203ENST00000542766 TAF1LQ8IZX4 1826 aa28.9■■■□□ 2.22
IFT43-203ENST00000542766 TATP17735 454 aaPredicted RBP28.89■■■□□ 2.22
IFT43-203ENST00000542766 PNPLA7Q6ZV29 1317 aa28.88■■■□□ 2.21
IFT43-203ENST00000542766 NCAPD2Q15021 1401 aa28.87■■■□□ 2.21
IFT43-203ENST00000542766 YY1P25490 414 aa28.87■■■□□ 2.21
IFT43-203ENST00000542766 SYT17Q9BSW7 474 aa28.87■■■□□ 2.21
IFT43-203ENST00000542766 CYP27B1O15528 508 aa28.85■■■□□ 2.21
IFT43-203ENST00000542766 C5P01031 1676 aa28.85■■■□□ 2.21
IFT43-203ENST00000542766 POLR3GLQ9BT43 218 aa28.84■■■□□ 2.21
IFT43-203ENST00000542766 CHD4Q14839 1912 aa28.83■■■□□ 2.21
IFT43-203ENST00000542766 PPM1GO15355 546 aaPredicted RBP28.83■■■□□ 2.21
IFT43-203ENST00000542766 PCDH11XQ9BZA7 1347 aa28.83■■■□□ 2.21
IFT43-203ENST00000542766 PCDH11YQ9BZA8 1340 aa28.83■■■□□ 2.21
IFT43-203ENST00000542766 ARXQ96QS3 562 aa28.82■■■□□ 2.2
IFT43-203ENST00000542766 CCNL1Q9UK58 526 aaPredicted RBP28.82■■■□□ 2.2
IFT43-203ENST00000542766 WASHC2AQ641Q2 1341 aa28.81■■■□□ 2.2
IFT43-203ENST00000542766 HSPA5P11021 654 aaKnown RBP28.81■■■□□ 2.2
IFT43-203ENST00000542766 TFCP2L1Q9NZI6 479 aa28.8■■■□□ 2.2
IFT43-203ENST00000542766 POLKQ9UBT6 870 aa28.8■■■□□ 2.2
IFT43-203ENST00000542766 DCAF8L1A6NGE4 600 aa28.79■■■□□ 2.2
IFT43-203ENST00000542766 SLC16A10Q8TF71 515 aa28.77■■■□□ 2.2
IFT43-203ENST00000542766 EYA1Q99502 592 aa28.77■■■□□ 2.2
IFT43-203ENST00000542766 MAP3K5Q99683 1374 aa28.76■■■□□ 2.2
IFT43-203ENST00000542766 EIF4G2P78344 907 aaKnown RBP eCLIP28.76■■■□□ 2.19
IFT43-203ENST00000542766 MPRIPQ6WCQ1 1025 aa28.75■■■□□ 2.19
IFT43-203ENST00000542766 TNNT2P45379 298 aaPredicted RBP28.74■■■□□ 2.19
IFT43-203ENST00000542766 PALLDQ8WX93 1383 aa28.74■■■□□ 2.19
IFT43-203ENST00000542766 COL23A1Q86Y22 540 aaPredicted RBP28.72■■■□□ 2.19
IFT43-203ENST00000542766 UBR3Q6ZT12 1888 aa28.72■■■□□ 2.19
IFT43-203ENST00000542766 C4BP0C0L5 1744 aa28.72■■■□□ 2.19
IFT43-203ENST00000542766 CCER1Q8TC90 406 aaPredicted RBP28.71■■■□□ 2.19
IFT43-203ENST00000542766 PANK3Q9H999 370 aa28.71■■■□□ 2.19
IFT43-203ENST00000542766 GOLGB1Q14789 3259 aaKnown RBP28.7■■■□□ 2.19
IFT43-203ENST00000542766 EIF4A2Q14240 407 aaKnown RBP28.7■■■□□ 2.18
IFT43-203ENST00000542766 NKX1-1Q15270 411 aaPredicted RBP28.7■■■□□ 2.18
IFT43-203ENST00000542766 PIGBQ92521 554 aa28.69■■■□□ 2.18
IFT43-203ENST00000542766 SPG7Q9UQ90 795 aa28.67■■■□□ 2.18
IFT43-203ENST00000542766 POLD1P28340 1107 aa28.66■■■□□ 2.18
IFT43-203ENST00000542766 KLHL34Q8N239 644 aa28.66■■■□□ 2.18
IFT43-203ENST00000542766 AMIGO3Q86WK7 504 aa28.65■■■□□ 2.18
IFT43-203ENST00000542766 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.64■■■□□ 2.18
IFT43-203ENST00000542766 MSH5O43196 834 aa28.63■■■□□ 2.17
IFT43-203ENST00000542766 MSL1Q68DK7 614 aa28.63■■■□□ 2.17
IFT43-203ENST00000542766 NLGN2Q8NFZ4 835 aa28.63■■■□□ 2.17
IFT43-203ENST00000542766 PHKG2P15735 406 aa28.62■■■□□ 2.17
IFT43-203ENST00000542766 IGSF1Q8N6C5 1336 aa28.62■■■□□ 2.17
IFT43-203ENST00000542766 SMIM5Q71RC9 77 aa28.61■■■□□ 2.17
IFT43-203ENST00000542766 SMARCC1Q92922 1105 aaPredicted RBP28.61■■■□□ 2.17
IFT43-203ENST00000542766 IFNL2Q8IZJ0 200 aa28.59■■■□□ 2.17
IFT43-203ENST00000542766 ASAP1Q9ULH1 1129 aa28.58■■■□□ 2.17
IFT43-203ENST00000542766 ZNF784Q8NCA9 323 aaPredicted RBP28.57■■■□□ 2.16
IFT43-203ENST00000542766 GPR162Q16538 588 aa28.56■■■□□ 2.16
IFT43-203ENST00000542766 LINC00116Q8NCU8 138 aa28.56■■■□□ 2.16
IFT43-203ENST00000542766 TMOD3Q9NYL9 352 aa28.56■■■□□ 2.16
IFT43-203ENST00000542766 LOC102724428A0A0B4J2F2 783 aa28.55■■■□□ 2.16
IFT43-203ENST00000542766 SIK1P57059 783 aa28.55■■■□□ 2.16
IFT43-203ENST00000542766 ITPK1Q13572 414 aa28.54■■■□□ 2.16
IFT43-203ENST00000542766 PLEKHG2Q9H7P9 1386 aa28.53■■■□□ 2.16
IFT43-203ENST00000542766 MORC1Q86VD1 984 aa28.53■■■□□ 2.16
IFT43-203ENST00000542766 AK7Q96M32 723 aa28.53■■■□□ 2.16
IFT43-203ENST00000542766 AEBP1Q8IUX7 1158 aa28.52■■■□□ 2.16
IFT43-203ENST00000542766 FLAD1Q8NFF5 587 aa28.52■■■□□ 2.16
IFT43-203ENST00000542766 ATG3Q9NT62 314 aa28.52■■■□□ 2.16
IFT43-203ENST00000542766 PHF14O94880 888 aa28.51■■■□□ 2.15
IFT43-203ENST00000542766 PELP1Q8IZL8 1130 aaKnown RBP28.51■■■□□ 2.15
IFT43-203ENST00000542766 COL5A3P25940 1745 aaPredicted RBP28.51■■■□□ 2.15
IFT43-203ENST00000542766 KDM6AO15550 1401 aaPredicted RBP28.51■■■□□ 2.15
IFT43-203ENST00000542766 VIRMAQ69YN4 1812 aaKnown RBP28.5■■■□□ 2.15
IFT43-203ENST00000542766 MYH14Q7Z406 1995 aaKnown RBP28.5■■■□□ 2.15
IFT43-203ENST00000542766 ZNF831Q5JPB2 1677 aa28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms