RNA–Protein interactions for RNA: ENST00000542371.1

USP5-207, Transcript of ubiquitin specific peptidase 5, humanhuman

TSL 2

Gene USP5, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP5-207ENST00000542371 LAS1LQ9Y4W2 734 aaKnown RBP20.55■□□□□ 0.88
USP5-207ENST00000542371 LRRC37A3O60309 1634 aa20.54■□□□□ 0.88
USP5-207ENST00000542371 PLIN1O60240 522 aa20.54■□□□□ 0.88
USP5-207ENST00000542371 TOM1O60784 492 aa20.54■□□□□ 0.88
USP5-207ENST00000542371 HAP1P54257 671 aaPredicted RBP20.54■□□□□ 0.88
USP5-207ENST00000542371 DCTN1Q14203 1278 aa20.54■□□□□ 0.88
USP5-207ENST00000542371 PDE3AQ14432 1141 aa20.54■□□□□ 0.88
USP5-207ENST00000542371 MBIPQ9NS73 344 aa20.54■□□□□ 0.88
USP5-207ENST00000542371 BABAM1Q9NWV8 329 aa20.54■□□□□ 0.88
USP5-207ENST00000542371 COL22A1Q8NFW1 1626 aaPredicted RBP20.53■□□□□ 0.88
USP5-207ENST00000542371 ALDH1L2Q3SY69 923 aa20.53■□□□□ 0.88
USP5-207ENST00000542371 MCM10Q7L590 875 aa20.53■□□□□ 0.88
USP5-207ENST00000542371 PELP1Q8IZL8 1130 aaKnown RBP20.52■□□□□ 0.88
USP5-207ENST00000542371 PRDM11Q9NQV5 511 aa20.52■□□□□ 0.88
USP5-207ENST00000542371 CHRNA2Q15822 529 aa20.51■□□□□ 0.87
USP5-207ENST00000542371 CSB-PGBD3P0DP91 1061 aa20.5■□□□□ 0.87
USP5-207ENST00000542371 MS4A1P11836 297 aa20.5■□□□□ 0.87
USP5-207ENST00000542371 BRPF1P55201 1214 aaPredicted RBP20.5■□□□□ 0.87
USP5-207ENST00000542371 AKAP4Q5JQC9 854 aa20.5■□□□□ 0.87
USP5-207ENST00000542371 EXOC6Q8TAG9 804 aa20.5■□□□□ 0.87
USP5-207ENST00000542371 NLRP2Q9NX02 1062 aa20.5■□□□□ 0.87
USP5-207ENST00000542371 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.5■□□□□ 0.87
USP5-207ENST00000542371 OVOS2A0A0G2JMS6 1433 aa20.49■□□□□ 0.87
USP5-207ENST00000542371 VAMP4O75379 141 aa20.48■□□□□ 0.87
USP5-207ENST00000542371 CANXP27824 592 aaKnown RBP20.48■□□□□ 0.87
USP5-207ENST00000542371 AEBP2Q6ZN18 517 aaPredicted RBP20.48■□□□□ 0.87
USP5-207ENST00000542371 RAPGEF4Q8WZA2 1011 aa20.48■□□□□ 0.87
USP5-207ENST00000542371 CRBNQ96SW2 442 aa20.48■□□□□ 0.87
USP5-207ENST00000542371 WDR17Q8IZU2 1322 aa20.48■□□□□ 0.87
USP5-207ENST00000542371 TATP17735 454 aaPredicted RBP20.47■□□□□ 0.87
USP5-207ENST00000542371 IL17REQ8NFR9 667 aa20.47■□□□□ 0.87
USP5-207ENST00000542371 SMC4Q9NTJ3 1288 aa20.47■□□□□ 0.87
USP5-207ENST00000542371 PHLPP1O60346 1717 aa20.47■□□□□ 0.87
USP5-207ENST00000542371 CEMIPQ8WUJ3 1361 aa20.46■□□□□ 0.87
USP5-207ENST00000542371 COL5A2P05997 1499 aaPredicted RBP20.46■□□□□ 0.87
USP5-207ENST00000542371 TWISTNBQ3B726 338 aaPredicted RBP20.46■□□□□ 0.87
USP5-207ENST00000542371 C1orf141Q5JVX7 400 aa20.46■□□□□ 0.87
USP5-207ENST00000542371 C20orf194Q5TEA3 1177 aa20.46■□□□□ 0.87
USP5-207ENST00000542371 ZNF530Q6P9A1 599 aaPredicted RBP20.46■□□□□ 0.87
USP5-207ENST00000542371 SSH1Q8WYL5 1049 aa20.46■□□□□ 0.87
USP5-207ENST00000542371 KIF16BQ96L93 1317 aa20.46■□□□□ 0.87
USP5-207ENST00000542371 COL16A1Q07092 1604 aaPredicted RBP20.45■□□□□ 0.87
USP5-207ENST00000542371 TAF7Q15545 349 aaPredicted RBP20.45■□□□□ 0.86
USP5-207ENST00000542371 ZKSCAN2Q63HK3 967 aa20.45■□□□□ 0.86
USP5-207ENST00000542371 SOS1Q07889 1333 aaPredicted RBP20.45■□□□□ 0.86
USP5-207ENST00000542371 IPO8O15397 1037 aaKnown RBP20.44■□□□□ 0.86
USP5-207ENST00000542371 AAMPQ13685 434 aa20.44■□□□□ 0.86
USP5-207ENST00000542371 CCDC136Q96JN2 1154 aa20.44■□□□□ 0.86
USP5-207ENST00000542371 TSPYL4Q9UJ04 414 aa20.44■□□□□ 0.86
USP5-207ENST00000542371 SPG7Q9UQ90 795 aa20.44■□□□□ 0.86
USP5-207ENST00000542371 COL14A1Q05707 1796 aaKnown RBP20.44■□□□□ 0.86
USP5-207ENST00000542371 C8orf58Q8NAV2 365 aa20.43■□□□□ 0.86
USP5-207ENST00000542371 FRAT1Q92837 279 aaPredicted RBP20.43■□□□□ 0.86
USP5-207ENST00000542371 ADAMTS7Q9UKP4 1686 aa20.42■□□□□ 0.86
USP5-207ENST00000542371 B4GALNT3Q6L9W6 998 aa20.42■□□□□ 0.86
USP5-207ENST00000542371 TSPYL6Q8N831 410 aa20.42■□□□□ 0.86
USP5-207ENST00000542371 CARD10Q9BWT7 1032 aa20.42■□□□□ 0.86
USP5-207ENST00000542371 BCL2L13Q9BXK5 485 aa20.41■□□□□ 0.86
USP5-207ENST00000542371 PKD1L3Q7Z443 1732 aa20.41■□□□□ 0.86
USP5-207ENST00000542371 RNMTO43148 476 aaKnown RBP20.4■□□□□ 0.86
USP5-207ENST00000542371 MEGF6O75095 1541 aa20.4■□□□□ 0.86
USP5-207ENST00000542371 TOM1L2Q6ZVM7 507 aa20.4■□□□□ 0.86
USP5-207ENST00000542371 MRPL50Q8N5N7 158 aaKnown RBP20.4■□□□□ 0.86
USP5-207ENST00000542371 ARHGAP45Q92619 1136 aa20.4■□□□□ 0.86
USP5-207ENST00000542371 PARP4Q9UKK3 1724 aaKnown RBP20.4■□□□□ 0.86
USP5-207ENST00000542371 EVA1CP58658 441 aa20.39■□□□□ 0.85
USP5-207ENST00000542371 UBAP1LF5GYI3 381 aa20.38■□□□□ 0.85
USP5-207ENST00000542371 TEFQ10587 303 aa20.38■□□□□ 0.85
USP5-207ENST00000542371 ATF7IPQ6VMQ6 1270 aa20.38■□□□□ 0.85
USP5-207ENST00000542371 DZIP1LQ8IYY4 767 aaKnown RBP20.38■□□□□ 0.85
USP5-207ENST00000542371 IFNL2Q8IZJ0 200 aa20.37■□□□□ 0.85
USP5-207ENST00000542371 LGR6Q9HBX8 967 aa20.37■□□□□ 0.85
USP5-207ENST00000542371 NOB1Q9ULX3 412 aaKnown RBP20.37■□□□□ 0.85
USP5-207ENST00000542371 VIRMAQ69YN4 1812 aaKnown RBP20.37■□□□□ 0.85
USP5-207ENST00000542371 ELL2O00472 640 aaPredicted RBP20.36■□□□□ 0.85
USP5-207ENST00000542371 HSP90AB1P08238 724 aaKnown RBP20.36■□□□□ 0.85
USP5-207ENST00000542371 PHKG2P15735 406 aa20.36■□□□□ 0.85
USP5-207ENST00000542371 PIP4K2BP78356 416 aa20.36■□□□□ 0.85
USP5-207ENST00000542371 CHMP4AQ9BY43 222 aa20.36■□□□□ 0.85
USP5-207ENST00000542371 KDM3BQ7LBC6 1761 aa20.36■□□□□ 0.85
USP5-207ENST00000542371 MPRIPQ6WCQ1 1025 aa20.35■□□□□ 0.85
USP5-207ENST00000542371 FTSJ3Q8IY81 847 aaKnown RBP20.35■□□□□ 0.85
USP5-207ENST00000542371 PANK1Q8TE04 598 aa20.35■□□□□ 0.85
USP5-207ENST00000542371 MIS18AQ9NYP9 233 aa20.35■□□□□ 0.85
USP5-207ENST00000542371 TRIM27P14373 513 aa20.34■□□□□ 0.85
USP5-207ENST00000542371 SIPA1L3O60292 1781 aaPredicted RBP20.34■□□□□ 0.85
USP5-207ENST00000542371 SCN11AQ9UI33 1791 aa20.34■□□□□ 0.85
USP5-207ENST00000542371 IL2RBP14784 551 aa20.33■□□□□ 0.85
USP5-207ENST00000542371 MVPQ14764 893 aaKnown RBP20.33■□□□□ 0.85
USP5-207ENST00000542371 CERKQ8TCT0 537 aa20.33■□□□□ 0.85
USP5-207ENST00000542371 BTG4Q9NY30 223 aa20.33■□□□□ 0.85
USP5-207ENST00000542371 COG6Q9Y2V7 657 aa20.33■□□□□ 0.85
USP5-207ENST00000542371 HOXB7P09629 217 aa20.32■□□□□ 0.84
USP5-207ENST00000542371 RLBP1P12271 317 aa20.32■□□□□ 0.84
USP5-207ENST00000542371 LARP1Q6PKG0 1096 aaKnown RBP20.32■□□□□ 0.84
USP5-207ENST00000542371 DCAF5Q96JK2 942 aa20.32■□□□□ 0.84
USP5-207ENST00000542371 API5Q9BZZ5 524 aaKnown RBP20.32■□□□□ 0.84
USP5-207ENST00000542371 STRN4Q9NRL3 753 aa20.32■□□□□ 0.84
USP5-207ENST00000542371 BTBD11A6QL63 1104 aa20.31■□□□□ 0.84
USP5-207ENST00000542371 KRT24Q2M2I5 525 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms