RNA–Protein interactions for RNA: ENST00000542277.5

PTPN6-216, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 3

Gene PTPN6, Length 664 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-216ENST00000542277 SLC16A10Q8TF71 515 aa25.08■■□□□ 1.61
PTPN6-216ENST00000542277 PNPLA7Q6ZV29 1317 aa25.08■■□□□ 1.6
PTPN6-216ENST00000542277 MYOM1P52179 1685 aa25.07■■□□□ 1.6
PTPN6-216ENST00000542277 ZNF784Q8NCA9 323 aaPredicted RBP25.05■■□□□ 1.6
PTPN6-216ENST00000542277 CARD14Q9BXL6 1004 aa25.05■■□□□ 1.6
PTPN6-216ENST00000542277 NSD2O96028 1365 aa25.05■■□□□ 1.6
PTPN6-216ENST00000542277 TRIM26Q12899 539 aaPredicted RBP25.04■■□□□ 1.6
PTPN6-216ENST00000542277 RAPGEF4Q8WZA2 1011 aa25.04■■□□□ 1.6
PTPN6-216ENST00000542277 BTAF1O14981 1849 aa25.04■■□□□ 1.6
PTPN6-216ENST00000542277 USP47Q96K76 1375 aa25.04■■□□□ 1.6
PTPN6-216ENST00000542277 MEGF6O75095 1541 aa25.03■■□□□ 1.6
PTPN6-216ENST00000542277 CCNL1Q9UK58 526 aaPredicted RBP25.03■■□□□ 1.6
PTPN6-216ENST00000542277 PAPPAQ13219 1627 aa25.02■■□□□ 1.6
PTPN6-216ENST00000542277 POLD1P28340 1107 aa25.02■■□□□ 1.6
PTPN6-216ENST00000542277 TATP17735 454 aaPredicted RBP25.01■■□□□ 1.59
PTPN6-216ENST00000542277 KLHL34Q8N239 644 aa25.01■■□□□ 1.59
PTPN6-216ENST00000542277 CGNL1Q0VF96 1302 aa25.01■■□□□ 1.59
PTPN6-216ENST00000542277 GPR162Q16538 588 aa25■■□□□ 1.59
PTPN6-216ENST00000542277 CDCA8Q53HL2 280 aa25■■□□□ 1.59
PTPN6-216ENST00000542277 RTL1A6NKG5 1358 aa25■■□□□ 1.59
PTPN6-216ENST00000542277 MAP3K5Q99683 1374 aa25■■□□□ 1.59
PTPN6-216ENST00000542277 COL23A1Q86Y22 540 aaPredicted RBP24.99■■□□□ 1.59
PTPN6-216ENST00000542277 INSRP06213 1382 aa24.98■■□□□ 1.59
PTPN6-216ENST00000542277 MSH5O43196 834 aa24.97■■□□□ 1.59
PTPN6-216ENST00000542277 CYP27B1O15528 508 aa24.96■■□□□ 1.59
PTPN6-216ENST00000542277 EMILIN1Q9Y6C2 1016 aa24.96■■□□□ 1.59
PTPN6-216ENST00000542277 MPRIPQ6WCQ1 1025 aa24.95■■□□□ 1.58
PTPN6-216ENST00000542277 NLGN2Q8NFZ4 835 aa24.94■■□□□ 1.58
PTPN6-216ENST00000542277 FAM208AQ9UK61 1670 aaKnown RBP24.94■■□□□ 1.58
PTPN6-216ENST00000542277 PPM1GO15355 546 aaPredicted RBP24.93■■□□□ 1.58
PTPN6-216ENST00000542277 FLT4P35916 1363 aa24.93■■□□□ 1.58
PTPN6-216ENST00000542277 PELP1Q8IZL8 1130 aaKnown RBP24.92■■□□□ 1.58
PTPN6-216ENST00000542277 SMG6Q86US8 1419 aaKnown RBP24.92■■□□□ 1.58
PTPN6-216ENST00000542277 RGPD2P0DJD1 1756 aa24.9■■□□□ 1.58
PTPN6-216ENST00000542277 PCDH11XQ9BZA7 1347 aa24.9■■□□□ 1.58
PTPN6-216ENST00000542277 PCDH11YQ9BZA8 1340 aa24.9■■□□□ 1.58
PTPN6-216ENST00000542277 MSL1Q68DK7 614 aa24.9■■□□□ 1.58
PTPN6-216ENST00000542277 KIF24Q5T7B8 1368 aa24.89■■□□□ 1.57
PTPN6-216ENST00000542277 PIGBQ92521 554 aa24.88■■□□□ 1.57
PTPN6-216ENST00000542277 GOLGB1Q14789 3259 aaKnown RBP24.88■■□□□ 1.57
PTPN6-216ENST00000542277 EYA1Q99502 592 aa24.87■■□□□ 1.57
PTPN6-216ENST00000542277 TIMELESSQ9UNS1 1208 aa24.87■■□□□ 1.57
PTPN6-216ENST00000542277 WASHC2AQ641Q2 1341 aa24.86■■□□□ 1.57
PTPN6-216ENST00000542277 NSD3Q9BZ95 1437 aa24.86■■□□□ 1.57
PTPN6-216ENST00000542277 NKX1-1Q15270 411 aaPredicted RBP24.86■■□□□ 1.57
PTPN6-216ENST00000542277 SMIM5Q71RC9 77 aa24.86■■□□□ 1.57
PTPN6-216ENST00000542277 PALLDQ8WX93 1383 aa24.85■■□□□ 1.57
PTPN6-216ENST00000542277 POLKQ9UBT6 870 aa24.85■■□□□ 1.57
PTPN6-216ENST00000542277 YBX3P16989 372 aaKnown RBP eCLIP24.84■■□□□ 1.57
PTPN6-216ENST00000542277 AMIGO3Q86WK7 504 aa24.84■■□□□ 1.57
PTPN6-216ENST00000542277 SMARCC1Q92922 1105 aaPredicted RBP24.84■■□□□ 1.57
PTPN6-216ENST00000542277 DOT1LQ8TEK3 1739 aa24.83■■□□□ 1.57
PTPN6-216ENST00000542277 FLAD1Q8NFF5 587 aa24.83■■□□□ 1.57
PTPN6-216ENST00000542277 SPG7Q9UQ90 795 aa24.83■■□□□ 1.57
PTPN6-216ENST00000542277 SHANK3Q9BYB0 1731 aa24.83■■□□□ 1.57
PTPN6-216ENST00000542277 POLR3GLQ9BT43 218 aa24.82■■□□□ 1.56
PTPN6-216ENST00000542277 HMGB2P26583 209 aaKnown RBP24.81■■□□□ 1.56
PTPN6-216ENST00000542277 C1QTNF8P60827 252 aa24.81■■□□□ 1.56
PTPN6-216ENST00000542277 PCGF6Q9BYE7 350 aa24.81■■□□□ 1.56
PTPN6-216ENST00000542277 LY75O60449 1722 aa24.81■■□□□ 1.56
PTPN6-216ENST00000542277 GRIN3BO60391 1043 aa24.79■■□□□ 1.56
PTPN6-216ENST00000542277 TNNT2P45379 298 aaPredicted RBP24.79■■□□□ 1.56
PTPN6-216ENST00000542277 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.79■■□□□ 1.56
PTPN6-216ENST00000542277 AK7Q96M32 723 aa24.78■■□□□ 1.56
PTPN6-216ENST00000542277 ASAP1Q9ULH1 1129 aa24.78■■□□□ 1.56
PTPN6-216ENST00000542277 CD2APQ9Y5K6 639 aa24.78■■□□□ 1.56
PTPN6-216ENST00000542277 QSER1Q2KHR3 1735 aa24.76■■□□□ 1.55
PTPN6-216ENST00000542277 LOC102724428A0A0B4J2F2 783 aa24.76■■□□□ 1.55
PTPN6-216ENST00000542277 PHF14O94880 888 aa24.76■■□□□ 1.55
PTPN6-216ENST00000542277 SIK1P57059 783 aa24.76■■□□□ 1.55
PTPN6-216ENST00000542277 EIF4A2Q14240 407 aaKnown RBP24.76■■□□□ 1.55
PTPN6-216ENST00000542277 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.75■■□□□ 1.55
PTPN6-216ENST00000542277 PHKG2P15735 406 aa24.75■■□□□ 1.55
PTPN6-216ENST00000542277 IFNL2Q8IZJ0 200 aa24.75■■□□□ 1.55
PTPN6-216ENST00000542277 LINC00116Q8NCU8 138 aa24.75■■□□□ 1.55
PTPN6-216ENST00000542277 NCAPD2Q15021 1401 aa24.75■■□□□ 1.55
PTPN6-216ENST00000542277 COL24A1Q17RW2 1714 aa24.75■■□□□ 1.55
PTPN6-216ENST00000542277 TMOD3Q9NYL9 352 aa24.74■■□□□ 1.55
PTPN6-216ENST00000542277 TUBGCP6Q96RT7 1819 aa24.74■■□□□ 1.55
PTPN6-216ENST00000542277 SENP3-EIF4A1A0A087X0R7 540 aa24.73■■□□□ 1.55
PTPN6-216ENST00000542277 ITPK1Q13572 414 aa24.73■■□□□ 1.55
PTPN6-216ENST00000542277 ATG3Q9NT62 314 aa24.73■■□□□ 1.55
PTPN6-216ENST00000542277 CHD4Q14839 1912 aa24.71■■□□□ 1.55
PTPN6-216ENST00000542277 ATP6V1AP38606 617 aa24.71■■□□□ 1.55
PTPN6-216ENST00000542277 PANK3Q9H999 370 aa24.71■■□□□ 1.55
PTPN6-216ENST00000542277 GIGYF1O75420 1035 aaPredicted RBP24.69■■□□□ 1.54
PTPN6-216ENST00000542277 HSPA5P11021 654 aaKnown RBP24.69■■□□□ 1.54
PTPN6-216ENST00000542277 SSFA2P28290 1259 aa24.69■■□□□ 1.54
PTPN6-216ENST00000542277 CLSPNQ9HAW4 1339 aa24.67■■□□□ 1.54
PTPN6-216ENST00000542277 EIF4G2P78344 907 aaKnown RBP eCLIP24.67■■□□□ 1.54
PTPN6-216ENST00000542277 WWC3Q9ULE0 1092 aa24.67■■□□□ 1.54
PTPN6-216ENST00000542277 KIF20BQ96Q89 1820 aa24.67■■□□□ 1.54
PTPN6-216ENST00000542277 GNPATO15228 680 aa24.66■■□□□ 1.54
PTPN6-216ENST00000542277 SLC4A9Q96Q91 983 aa24.66■■□□□ 1.54
PTPN6-216ENST00000542277 ERVV-2B6SEH9 535 aa24.63■■□□□ 1.53
PTPN6-216ENST00000542277 PLEKHO1Q53GL0 409 aaPredicted RBP24.63■■□□□ 1.53
PTPN6-216ENST00000542277 TOGARAM1Q9Y4F4 1720 aa24.63■■□□□ 1.53
PTPN6-216ENST00000542277 IGSF1Q8N6C5 1336 aa24.62■■□□□ 1.53
PTPN6-216ENST00000542277 RBM42Q9BTD8 480 aaKnown RBP24.62■■□□□ 1.53
PTPN6-216ENST00000542277 C5P01031 1676 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms