RNA–Protein interactions for RNA: ENST00000542150.5

COPS7A-213, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 658 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-213ENST00000542150 NBPF6Q5VWK0 638 aa17.13■□□□□ 0.33
COPS7A-213ENST00000542150 NBPF4Q96M43 638 aa17.13■□□□□ 0.33
COPS7A-213ENST00000542150 RTL1A6NKG5 1358 aa17.12■□□□□ 0.33
COPS7A-213ENST00000542150 RRS1Q15050 365 aaKnown RBP17.11■□□□□ 0.33
COPS7A-213ENST00000542150 COL24A1Q17RW2 1714 aa17.1■□□□□ 0.33
COPS7A-213ENST00000542150 GOLGB1Q14789 3259 aaKnown RBP17.1■□□□□ 0.33
COPS7A-213ENST00000542150 SYTL4Q96C24 671 aaPredicted RBP17.1■□□□□ 0.33
COPS7A-213ENST00000542150 TFCP2L1Q9NZI6 479 aa17.1■□□□□ 0.33
COPS7A-213ENST00000542150 CGNL1Q0VF96 1302 aa17.1■□□□□ 0.33
COPS7A-213ENST00000542150 GGNBP2Q9H3C7 697 aa17.09■□□□□ 0.33
COPS7A-213ENST00000542150 QSER1Q2KHR3 1735 aa17.08■□□□□ 0.32
COPS7A-213ENST00000542150 SHANK3Q9BYB0 1731 aa17.08■□□□□ 0.32
COPS7A-213ENST00000542150 POLD1P28340 1107 aa17.08■□□□□ 0.32
COPS7A-213ENST00000542150 COL23A1Q86Y22 540 aaPredicted RBP17.07■□□□□ 0.32
COPS7A-213ENST00000542150 USHBP1Q8N6Y0 703 aa17.07■□□□□ 0.32
COPS7A-213ENST00000542150 CCNL1Q9UK58 526 aaPredicted RBP17.07■□□□□ 0.32
COPS7A-213ENST00000542150 INSRP06213 1382 aa17.06■□□□□ 0.32
COPS7A-213ENST00000542150 TMF1P82094 1093 aa17.06■□□□□ 0.32
COPS7A-213ENST00000542150 HSP90AB2PQ58FF8 381 aa17.06■□□□□ 0.32
COPS7A-213ENST00000542150 NLGN2Q8NFZ4 835 aa17.06■□□□□ 0.32
COPS7A-213ENST00000542150 LY75O60449 1722 aa17.06■□□□□ 0.32
COPS7A-213ENST00000542150 GPR162Q16538 588 aa17.05■□□□□ 0.32
COPS7A-213ENST00000542150 DOT1LQ8TEK3 1739 aa17.04■□□□□ 0.32
COPS7A-213ENST00000542150 KIF24Q5T7B8 1368 aa17.04■□□□□ 0.32
COPS7A-213ENST00000542150 USP47Q96K76 1375 aa17.04■□□□□ 0.32
COPS7A-213ENST00000542150 RAPGEF4Q8WZA2 1011 aa17.04■□□□□ 0.32
COPS7A-213ENST00000542150 CARD14Q9BXL6 1004 aa17.04■□□□□ 0.32
COPS7A-213ENST00000542150 KAT6BQ8WYB5 2073 aa17.03■□□□□ 0.32
COPS7A-213ENST00000542150 RGPD2P0DJD1 1756 aa17.03■□□□□ 0.32
COPS7A-213ENST00000542150 CYP27B1O15528 508 aa17.03■□□□□ 0.32
COPS7A-213ENST00000542150 C1QTNF8P60827 252 aa17.03■□□□□ 0.32
COPS7A-213ENST00000542150 TATP17735 454 aaPredicted RBP17.02■□□□□ 0.32
COPS7A-213ENST00000542150 TUBGCP6Q96RT7 1819 aa17.02■□□□□ 0.31
COPS7A-213ENST00000542150 FLT4P35916 1363 aa17.02■□□□□ 0.31
COPS7A-213ENST00000542150 SMG6Q86US8 1419 aaKnown RBP17.01■□□□□ 0.31
COPS7A-213ENST00000542150 PCDH11XQ9BZA7 1347 aa17■□□□□ 0.31
COPS7A-213ENST00000542150 PCDH11YQ9BZA8 1340 aa17■□□□□ 0.31
COPS7A-213ENST00000542150 YBX3P16989 372 aaKnown RBP eCLIP17■□□□□ 0.31
COPS7A-213ENST00000542150 NCAPD2Q15021 1401 aa17■□□□□ 0.31
COPS7A-213ENST00000542150 KLHL34Q8N239 644 aa17■□□□□ 0.31
COPS7A-213ENST00000542150 CHD4Q14839 1912 aa17■□□□□ 0.31
COPS7A-213ENST00000542150 PALLDQ8WX93 1383 aa16.99■□□□□ 0.31
COPS7A-213ENST00000542150 NKX1-1Q15270 411 aaPredicted RBP16.98■□□□□ 0.31
COPS7A-213ENST00000542150 CDCA8Q53HL2 280 aa16.98■□□□□ 0.31
COPS7A-213ENST00000542150 EMILIN1Q9Y6C2 1016 aa16.98■□□□□ 0.31
COPS7A-213ENST00000542150 GRIN3BO60391 1043 aa16.97■□□□□ 0.31
COPS7A-213ENST00000542150 MSL1Q68DK7 614 aa16.97■□□□□ 0.31
COPS7A-213ENST00000542150 MPRIPQ6WCQ1 1025 aa16.97■□□□□ 0.31
COPS7A-213ENST00000542150 AMIGO3Q86WK7 504 aa16.97■□□□□ 0.31
COPS7A-213ENST00000542150 MSH5O43196 834 aa16.96■□□□□ 0.31
COPS7A-213ENST00000542150 HMGB2P26583 209 aaKnown RBP16.96■□□□□ 0.31
COPS7A-213ENST00000542150 PELP1Q8IZL8 1130 aaKnown RBP16.96■□□□□ 0.31
COPS7A-213ENST00000542150 FLAD1Q8NFF5 587 aa16.96■□□□□ 0.31
COPS7A-213ENST00000542150 PIGBQ92521 554 aa16.96■□□□□ 0.31
COPS7A-213ENST00000542150 CD2APQ9Y5K6 639 aa16.96■□□□□ 0.31
COPS7A-213ENST00000542150 WASHC2AQ641Q2 1341 aa16.95■□□□□ 0.3
COPS7A-213ENST00000542150 SENP3-EIF4A1A0A087X0R7 540 aa16.94■□□□□ 0.3
COPS7A-213ENST00000542150 SMARCC1Q92922 1105 aaPredicted RBP16.94■□□□□ 0.3
COPS7A-213ENST00000542150 NSD3Q9BZ95 1437 aa16.94■□□□□ 0.3
COPS7A-213ENST00000542150 EYA1Q99502 592 aa16.93■□□□□ 0.3
COPS7A-213ENST00000542150 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.93■□□□□ 0.3
COPS7A-213ENST00000542150 SMIM5Q71RC9 77 aa16.92■□□□□ 0.3
COPS7A-213ENST00000542150 C5P01031 1676 aa16.91■□□□□ 0.3
COPS7A-213ENST00000542150 TOGARAM1Q9Y4F4 1720 aa16.91■□□□□ 0.3
COPS7A-213ENST00000542150 GIGYF1O75420 1035 aaPredicted RBP16.91■□□□□ 0.3
COPS7A-213ENST00000542150 POLKQ9UBT6 870 aa16.91■□□□□ 0.3
COPS7A-213ENST00000542150 PKD1L3Q7Z443 1732 aa16.9■□□□□ 0.3
COPS7A-213ENST00000542150 LOC102724428A0A0B4J2F2 783 aa16.9■□□□□ 0.3
COPS7A-213ENST00000542150 SIK1P57059 783 aa16.9■□□□□ 0.3
COPS7A-213ENST00000542150 SPG7Q9UQ90 795 aa16.9■□□□□ 0.3
COPS7A-213ENST00000542150 KIF20BQ96Q89 1820 aa16.89■□□□□ 0.29
COPS7A-213ENST00000542150 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.89■□□□□ 0.29
COPS7A-213ENST00000542150 LINC00116Q8NCU8 138 aa16.89■□□□□ 0.29
COPS7A-213ENST00000542150 AK7Q96M32 723 aa16.89■□□□□ 0.29
COPS7A-213ENST00000542150 TIMELESSQ9UNS1 1208 aa16.89■□□□□ 0.29
COPS7A-213ENST00000542150 C4BP0C0L5 1744 aa16.88■□□□□ 0.29
COPS7A-213ENST00000542150 PHKG2P15735 406 aa16.88■□□□□ 0.29
COPS7A-213ENST00000542150 SSFA2P28290 1259 aa16.88■□□□□ 0.29
COPS7A-213ENST00000542150 TRIM26Q12899 539 aaPredicted RBP16.88■□□□□ 0.29
COPS7A-213ENST00000542150 ITPK1Q13572 414 aa16.88■□□□□ 0.29
COPS7A-213ENST00000542150 ASAP1Q9ULH1 1129 aa16.88■□□□□ 0.29
COPS7A-213ENST00000542150 ANKRD26Q9UPS8 1709 aa16.87■□□□□ 0.29
COPS7A-213ENST00000542150 MAP2P11137 1827 aaKnown RBP16.87■□□□□ 0.29
COPS7A-213ENST00000542150 TAF1LQ8IZX4 1826 aa16.87■□□□□ 0.29
COPS7A-213ENST00000542150 PPM1GO15355 546 aaPredicted RBP16.87■□□□□ 0.29
COPS7A-213ENST00000542150 ADCY9O60503 1353 aa16.87■□□□□ 0.29
COPS7A-213ENST00000542150 IFNL2Q8IZJ0 200 aa16.86■□□□□ 0.29
COPS7A-213ENST00000542150 ATP10DQ9P241 1426 aa16.86■□□□□ 0.29
COPS7A-213ENST00000542150 CEP350Q5VT06 3117 aa16.85■□□□□ 0.29
COPS7A-213ENST00000542150 ITGB4P16144 1822 aa16.85■□□□□ 0.29
COPS7A-213ENST00000542150 PHF14O94880 888 aa16.85■□□□□ 0.29
COPS7A-213ENST00000542150 EIF4A2Q14240 407 aaKnown RBP16.85■□□□□ 0.29
COPS7A-213ENST00000542150 ATG3Q9NT62 314 aa16.85■□□□□ 0.29
COPS7A-213ENST00000542150 TMOD3Q9NYL9 352 aa16.85■□□□□ 0.29
COPS7A-213ENST00000542150 PLEKHG2Q9H7P9 1386 aa16.85■□□□□ 0.29
COPS7A-213ENST00000542150 UBR3Q6ZT12 1888 aa16.83■□□□□ 0.28
COPS7A-213ENST00000542150 IGSF1Q8N6C5 1336 aa16.83■□□□□ 0.28
COPS7A-213ENST00000542150 SLC4A9Q96Q91 983 aa16.83■□□□□ 0.28
COPS7A-213ENST00000542150 KDRP35968 1356 aa16.82■□□□□ 0.28
COPS7A-213ENST00000542150 ATP6V1AP38606 617 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms