RNA–Protein interactions for RNA: ENST00000542108.1

KNOP1P1-201, Transcript of lysine rich nucleolar protein 1 pseudogene 1, humanhuman

BASIC

Gene KNOP1P1, Length 989 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1P1-201ENST00000542108 SLC27A3Q5K4L6 730 aa18.36■□□□□ 0.53
KNOP1P1-201ENST00000542108 RAPGEF4Q8WZA2 1011 aa18.36■□□□□ 0.53
KNOP1P1-201ENST00000542108 DOT1LQ8TEK3 1739 aa18.35■□□□□ 0.53
KNOP1P1-201ENST00000542108 PDGFDQ9GZP0 370 aaPredicted RBP18.35■□□□□ 0.53
KNOP1P1-201ENST00000542108 ZBTB7AO95365 584 aa18.34■□□□□ 0.53
KNOP1P1-201ENST00000542108 HSP90AB2PQ58FF8 381 aa18.34■□□□□ 0.53
KNOP1P1-201ENST00000542108 MTFR1LQ9H019 292 aa18.34■□□□□ 0.53
KNOP1P1-201ENST00000542108 ANKRD26Q9UPS8 1709 aa18.34■□□□□ 0.53
KNOP1P1-201ENST00000542108 DCAF8L1A6NGE4 600 aa18.32■□□□□ 0.52
KNOP1P1-201ENST00000542108 TATP17735 454 aaPredicted RBP18.32■□□□□ 0.52
KNOP1P1-201ENST00000542108 PTGER2P43116 358 aa18.32■□□□□ 0.52
KNOP1P1-201ENST00000542108 PRIM1P49642 420 aaKnown RBP18.32■□□□□ 0.52
KNOP1P1-201ENST00000542108 EIF4G2P78344 907 aaKnown RBP eCLIP18.32■□□□□ 0.52
KNOP1P1-201ENST00000542108 SYTL4Q96C24 671 aaPredicted RBP18.32■□□□□ 0.52
KNOP1P1-201ENST00000542108 LRRC4BQ9NT99 713 aa18.32■□□□□ 0.52
KNOP1P1-201ENST00000542108 NSD2O96028 1365 aa18.31■□□□□ 0.52
KNOP1P1-201ENST00000542108 PCDH11XQ9BZA7 1347 aa18.31■□□□□ 0.52
KNOP1P1-201ENST00000542108 PCDH11YQ9BZA8 1340 aa18.31■□□□□ 0.52
KNOP1P1-201ENST00000542108 USHBP1Q8N6Y0 703 aa18.31■□□□□ 0.52
KNOP1P1-201ENST00000542108 QSER1Q2KHR3 1735 aa18.31■□□□□ 0.52
KNOP1P1-201ENST00000542108 NCAPD2Q15021 1401 aa18.31■□□□□ 0.52
KNOP1P1-201ENST00000542108 LY75O60449 1722 aa18.3■□□□□ 0.52
KNOP1P1-201ENST00000542108 ZNF827Q17R98 1081 aa18.3■□□□□ 0.52
KNOP1P1-201ENST00000542108 EMILIN1Q9Y6C2 1016 aa18.3■□□□□ 0.52
KNOP1P1-201ENST00000542108 CCER1Q8TC90 406 aaPredicted RBP18.29■□□□□ 0.52
KNOP1P1-201ENST00000542108 AKT1S1Q96B36 256 aa18.29■□□□□ 0.52
KNOP1P1-201ENST00000542108 ATF5Q9Y2D1 282 aaPredicted RBP18.29■□□□□ 0.52
KNOP1P1-201ENST00000542108 WASHC2AQ641Q2 1341 aa18.28■□□□□ 0.52
KNOP1P1-201ENST00000542108 HMGB2P26583 209 aaKnown RBP18.28■□□□□ 0.52
KNOP1P1-201ENST00000542108 SGIP1Q9BQI5 828 aa18.28■□□□□ 0.52
KNOP1P1-201ENST00000542108 PKD1L3Q7Z443 1732 aa18.27■□□□□ 0.52
KNOP1P1-201ENST00000542108 SLC16A10Q8TF71 515 aa18.27■□□□□ 0.52
KNOP1P1-201ENST00000542108 HSPA5P11021 654 aaKnown RBP18.26■□□□□ 0.51
KNOP1P1-201ENST00000542108 MAP2P11137 1827 aaKnown RBP18.26■□□□□ 0.51
KNOP1P1-201ENST00000542108 PPM1GO15355 546 aaPredicted RBP18.25■□□□□ 0.51
KNOP1P1-201ENST00000542108 POLR3GLQ9BT43 218 aa18.25■□□□□ 0.51
KNOP1P1-201ENST00000542108 PLEKHG2Q9H7P9 1386 aa18.25■□□□□ 0.51
KNOP1P1-201ENST00000542108 POLKQ9UBT6 870 aa18.24■□□□□ 0.51
KNOP1P1-201ENST00000542108 CCNL1Q9UK58 526 aaPredicted RBP18.24■□□□□ 0.51
KNOP1P1-201ENST00000542108 MAP3K5Q99683 1374 aa18.24■□□□□ 0.51
KNOP1P1-201ENST00000542108 CYP27B1O15528 508 aa18.23■□□□□ 0.51
KNOP1P1-201ENST00000542108 ARXQ96QS3 562 aa18.23■□□□□ 0.51
KNOP1P1-201ENST00000542108 FHDC1Q9C0D6 1143 aaPredicted RBP18.23■□□□□ 0.51
KNOP1P1-201ENST00000542108 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.23■□□□□ 0.51
KNOP1P1-201ENST00000542108 TFCP2L1Q9NZI6 479 aa18.23■□□□□ 0.51
KNOP1P1-201ENST00000542108 PNPLA7Q6ZV29 1317 aa18.23■□□□□ 0.51
KNOP1P1-201ENST00000542108 SYT17Q9BSW7 474 aa18.22■□□□□ 0.51
KNOP1P1-201ENST00000542108 SPG7Q9UQ90 795 aa18.22■□□□□ 0.51
KNOP1P1-201ENST00000542108 COL24A1Q17RW2 1714 aa18.21■□□□□ 0.51
KNOP1P1-201ENST00000542108 YY1P25490 414 aa18.21■□□□□ 0.51
KNOP1P1-201ENST00000542108 NKX1-1Q15270 411 aaPredicted RBP18.21■□□□□ 0.51
KNOP1P1-201ENST00000542108 EYA1Q99502 592 aa18.21■□□□□ 0.51
KNOP1P1-201ENST00000542108 TUBGCP6Q96RT7 1819 aa18.21■□□□□ 0.51
KNOP1P1-201ENST00000542108 PANK3Q9H999 370 aa18.2■□□□□ 0.5
KNOP1P1-201ENST00000542108 PALLDQ8WX93 1383 aa18.19■□□□□ 0.5
KNOP1P1-201ENST00000542108 POLD1P28340 1107 aa18.19■□□□□ 0.5
KNOP1P1-201ENST00000542108 KCNQ4P56696 695 aa18.19■□□□□ 0.5
KNOP1P1-201ENST00000542108 SMARCC1Q92922 1105 aaPredicted RBP18.19■□□□□ 0.5
KNOP1P1-201ENST00000542108 TOGARAM1Q9Y4F4 1720 aa18.19■□□□□ 0.5
KNOP1P1-201ENST00000542108 C5P01031 1676 aa18.18■□□□□ 0.5
KNOP1P1-201ENST00000542108 ITGB4P16144 1822 aa18.18■□□□□ 0.5
KNOP1P1-201ENST00000542108 EIF4A2Q14240 407 aaKnown RBP18.17■□□□□ 0.5
KNOP1P1-201ENST00000542108 MPRIPQ6WCQ1 1025 aa18.17■□□□□ 0.5
KNOP1P1-201ENST00000542108 TNNT2P45379 298 aaPredicted RBP18.16■□□□□ 0.5
KNOP1P1-201ENST00000542108 IGSF1Q8N6C5 1336 aa18.16■□□□□ 0.5
KNOP1P1-201ENST00000542108 TAF1LQ8IZX4 1826 aa18.15■□□□□ 0.5
KNOP1P1-201ENST00000542108 IFNL2Q8IZJ0 200 aa18.15■□□□□ 0.5
KNOP1P1-201ENST00000542108 FLAD1Q8NFF5 587 aa18.15■□□□□ 0.5
KNOP1P1-201ENST00000542108 PHKG2P15735 406 aa18.13■□□□□ 0.49
KNOP1P1-201ENST00000542108 PIGBQ92521 554 aa18.13■□□□□ 0.49
KNOP1P1-201ENST00000542108 KNSTRNQ9Y448 316 aa18.13■□□□□ 0.49
KNOP1P1-201ENST00000542108 MORC1Q86VD1 984 aa18.12■□□□□ 0.49
KNOP1P1-201ENST00000542108 COL23A1Q86Y22 540 aaPredicted RBP18.12■□□□□ 0.49
KNOP1P1-201ENST00000542108 TMOD3Q9NYL9 352 aa18.12■□□□□ 0.49
KNOP1P1-201ENST00000542108 C4BP0C0L5 1744 aa18.12■□□□□ 0.49
KNOP1P1-201ENST00000542108 MSH5O43196 834 aa18.1■□□□□ 0.49
KNOP1P1-201ENST00000542108 HSP90AB1P08238 724 aaKnown RBP18.1■□□□□ 0.49
KNOP1P1-201ENST00000542108 AK7Q96M32 723 aa18.09■□□□□ 0.49
KNOP1P1-201ENST00000542108 LOC102724428A0A0B4J2F2 783 aa18.08■□□□□ 0.48
KNOP1P1-201ENST00000542108 SIK1P57059 783 aa18.08■□□□□ 0.48
KNOP1P1-201ENST00000542108 AMOTQ4VCS5 1084 aa18.08■□□□□ 0.48
KNOP1P1-201ENST00000542108 PLEKHO1Q53GL0 409 aaPredicted RBP18.08■□□□□ 0.48
KNOP1P1-201ENST00000542108 KIF7Q2M1P5 1343 aa18.07■□□□□ 0.48
KNOP1P1-201ENST00000542108 KLHL34Q8N239 644 aa18.07■□□□□ 0.48
KNOP1P1-201ENST00000542108 DCAF5Q96JK2 942 aa18.07■□□□□ 0.48
KNOP1P1-201ENST00000542108 UTRNP46939 3433 aa18.07■□□□□ 0.48
KNOP1P1-201ENST00000542108 CHD4Q14839 1912 aa18.07■□□□□ 0.48
KNOP1P1-201ENST00000542108 UBR3Q6ZT12 1888 aa18.06■□□□□ 0.48
KNOP1P1-201ENST00000542108 ERVV-2B6SEH9 535 aa18.06■□□□□ 0.48
KNOP1P1-201ENST00000542108 AMER1Q5JTC6 1135 aaPredicted RBP18.06■□□□□ 0.48
KNOP1P1-201ENST00000542108 KDRP35968 1356 aa18.05■□□□□ 0.48
KNOP1P1-201ENST00000542108 SSFA2P28290 1259 aa18.05■□□□□ 0.48
KNOP1P1-201ENST00000542108 GPR162Q16538 588 aa18.05■□□□□ 0.48
KNOP1P1-201ENST00000542108 ASAP1Q9ULH1 1129 aa18.05■□□□□ 0.48
KNOP1P1-201ENST00000542108 ZNF831Q5JPB2 1677 aa18.05■□□□□ 0.48
KNOP1P1-201ENST00000542108 MSL1Q68DK7 614 aa18.03■□□□□ 0.48
KNOP1P1-201ENST00000542108 ZNF530Q6P9A1 599 aaPredicted RBP18.03■□□□□ 0.48
KNOP1P1-201ENST00000542108 LINC00116Q8NCU8 138 aa18.03■□□□□ 0.48
KNOP1P1-201ENST00000542108 ATG3Q9NT62 314 aa18.03■□□□□ 0.48
KNOP1P1-201ENST00000542108 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms