RNA–Protein interactions for RNA: ENST00000542018.5

RAP1B-227, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-227ENST00000542018 ANKRD36BQ8N2N9 1353 aa26.82■■□□□ 1.88
RAP1B-227ENST00000542018 TERF2IPQ9NYB0 399 aa26.81■■□□□ 1.88
RAP1B-227ENST00000542018 KLHL34Q8N239 644 aa26.8■■□□□ 1.88
RAP1B-227ENST00000542018 MAP3K19Q56UN5 1328 aa26.8■■□□□ 1.88
RAP1B-227ENST00000542018 PUS7Q96PZ0 661 aaKnown RBP26.79■■□□□ 1.88
RAP1B-227ENST00000542018 TFCP2L1Q9NZI6 479 aa26.79■■□□□ 1.88
RAP1B-227ENST00000542018 MEGF6O75095 1541 aa26.79■■□□□ 1.88
RAP1B-227ENST00000542018 POLD1P28340 1107 aa26.78■■□□□ 1.88
RAP1B-227ENST00000542018 HOXC9P31274 260 aa26.78■■□□□ 1.88
RAP1B-227ENST00000542018 SYTL4Q96C24 671 aaPredicted RBP26.78■■□□□ 1.88
RAP1B-227ENST00000542018 TESK2Q96S53 571 aa26.75■■□□□ 1.87
RAP1B-227ENST00000542018 CEP350Q5VT06 3117 aa26.74■■□□□ 1.87
RAP1B-227ENST00000542018 YBX3P16989 372 aaKnown RBP eCLIP26.74■■□□□ 1.87
RAP1B-227ENST00000542018 PELP1Q8IZL8 1130 aaKnown RBP26.74■■□□□ 1.87
RAP1B-227ENST00000542018 ZCRB1Q8TBF4 217 aaKnown RBP26.74■■□□□ 1.87
RAP1B-227ENST00000542018 COL23A1Q86Y22 540 aaPredicted RBP26.72■■□□□ 1.87
RAP1B-227ENST00000542018 COG3Q96JB2 828 aa26.71■■□□□ 1.87
RAP1B-227ENST00000542018 CCNL1Q9UK58 526 aaPredicted RBP26.71■■□□□ 1.87
RAP1B-227ENST00000542018 GIGYF1O75420 1035 aaPredicted RBP26.69■■□□□ 1.86
RAP1B-227ENST00000542018 AMPHP49418 695 aa26.69■■□□□ 1.86
RAP1B-227ENST00000542018 NBPF6Q5VWK0 638 aa26.69■■□□□ 1.86
RAP1B-227ENST00000542018 NBPF4Q96M43 638 aa26.69■■□□□ 1.86
RAP1B-227ENST00000542018 C5P01031 1676 aa26.66■■□□□ 1.86
RAP1B-227ENST00000542018 RRS1Q15050 365 aaKnown RBP26.66■■□□□ 1.86
RAP1B-227ENST00000542018 USHBP1Q8N6Y0 703 aa26.66■■□□□ 1.86
RAP1B-227ENST00000542018 TAF1LQ8IZX4 1826 aa26.65■■□□□ 1.86
RAP1B-227ENST00000542018 ST20-MTHFSA0A0A6YYL1 179 aa26.65■■□□□ 1.86
RAP1B-227ENST00000542018 MSL1Q68DK7 614 aa26.65■■□□□ 1.86
RAP1B-227ENST00000542018 RTL1A6NKG5 1358 aa26.65■■□□□ 1.86
RAP1B-227ENST00000542018 USP47Q96K76 1375 aa26.64■■□□□ 1.86
RAP1B-227ENST00000542018 FYB1O15117 783 aa26.62■■□□□ 1.85
RAP1B-227ENST00000542018 MSH5O43196 834 aa26.62■■□□□ 1.85
RAP1B-227ENST00000542018 GRIN3BO60391 1043 aa26.61■■□□□ 1.85
RAP1B-227ENST00000542018 TOGARAM1Q9Y4F4 1720 aa26.6■■□□□ 1.85
RAP1B-227ENST00000542018 CGNL1Q0VF96 1302 aa26.6■■□□□ 1.85
RAP1B-227ENST00000542018 TONSLQ96HA7 1378 aa26.59■■□□□ 1.85
RAP1B-227ENST00000542018 AMIGO3Q86WK7 504 aa26.59■■□□□ 1.85
RAP1B-227ENST00000542018 GGNBP2Q9H3C7 697 aa26.59■■□□□ 1.85
RAP1B-227ENST00000542018 ITGB4P16144 1822 aa26.58■■□□□ 1.84
RAP1B-227ENST00000542018 ATP10DQ9P241 1426 aa26.56■■□□□ 1.84
RAP1B-227ENST00000542018 HSP90AB2PQ58FF8 381 aa26.56■■□□□ 1.84
RAP1B-227ENST00000542018 RAPGEF4Q8WZA2 1011 aa26.56■■□□□ 1.84
RAP1B-227ENST00000542018 PALLDQ8WX93 1383 aa26.56■■□□□ 1.84
RAP1B-227ENST00000542018 CD2APQ9Y5K6 639 aa26.55■■□□□ 1.84
RAP1B-227ENST00000542018 C4BP0C0L5 1744 aa26.55■■□□□ 1.84
RAP1B-227ENST00000542018 INSRP06213 1382 aa26.55■■□□□ 1.84
RAP1B-227ENST00000542018 CYP27B1O15528 508 aa26.54■■□□□ 1.84
RAP1B-227ENST00000542018 UBR3Q6ZT12 1888 aa26.53■■□□□ 1.84
RAP1B-227ENST00000542018 TATP17735 454 aaPredicted RBP26.53■■□□□ 1.84
RAP1B-227ENST00000542018 PCDH11XQ9BZA7 1347 aa26.53■■□□□ 1.84
RAP1B-227ENST00000542018 PCDH11YQ9BZA8 1340 aa26.53■■□□□ 1.84
RAP1B-227ENST00000542018 ADCY9O60503 1353 aa26.52■■□□□ 1.84
RAP1B-227ENST00000542018 SMIM5Q71RC9 77 aa26.52■■□□□ 1.84
RAP1B-227ENST00000542018 SMG6Q86US8 1419 aaKnown RBP26.52■■□□□ 1.84
RAP1B-227ENST00000542018 KIF20BQ96Q89 1820 aa26.52■■□□□ 1.84
RAP1B-227ENST00000542018 MAP2P11137 1827 aaKnown RBP26.51■■□□□ 1.83
RAP1B-227ENST00000542018 PKD1L3Q7Z443 1732 aa26.51■■□□□ 1.83
RAP1B-227ENST00000542018 MPRIPQ6WCQ1 1025 aa26.51■■□□□ 1.83
RAP1B-227ENST00000542018 IFFO2Q5TF58 517 aa26.49■■□□□ 1.83
RAP1B-227ENST00000542018 FLAD1Q8NFF5 587 aa26.49■■□□□ 1.83
RAP1B-227ENST00000542018 FLT4P35916 1363 aa26.48■■□□□ 1.83
RAP1B-227ENST00000542018 NCAPD2Q15021 1401 aa26.47■■□□□ 1.83
RAP1B-227ENST00000542018 SLC24A1O60721 1099 aa26.46■■□□□ 1.83
RAP1B-227ENST00000542018 PIGBQ92521 554 aa26.46■■□□□ 1.83
RAP1B-227ENST00000542018 KIF24Q5T7B8 1368 aa26.46■■□□□ 1.83
RAP1B-227ENST00000542018 CARD14Q9BXL6 1004 aa26.44■■□□□ 1.82
RAP1B-227ENST00000542018 NKX1-1Q15270 411 aaPredicted RBP26.43■■□□□ 1.82
RAP1B-227ENST00000542018 AK7Q96M32 723 aa26.43■■□□□ 1.82
RAP1B-227ENST00000542018 GPBP1L1Q9HC44 474 aaPredicted RBP26.43■■□□□ 1.82
RAP1B-227ENST00000542018 EMILIN1Q9Y6C2 1016 aa26.43■■□□□ 1.82
RAP1B-227ENST00000542018 IGSF1Q8N6C5 1336 aa26.42■■□□□ 1.82
RAP1B-227ENST00000542018 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.42■■□□□ 1.82
RAP1B-227ENST00000542018 PHF14O94880 888 aa26.42■■□□□ 1.82
RAP1B-227ENST00000542018 SMARCC1Q92922 1105 aaPredicted RBP26.42■■□□□ 1.82
RAP1B-227ENST00000542018 WWC3Q9ULE0 1092 aa26.42■■□□□ 1.82
RAP1B-227ENST00000542018 TMF1P82094 1093 aa26.41■■□□□ 1.82
RAP1B-227ENST00000542018 LINC00116Q8NCU8 138 aa26.41■■□□□ 1.82
RAP1B-227ENST00000542018 ANKRD26Q9UPS8 1709 aa26.41■■□□□ 1.82
RAP1B-227ENST00000542018 ZNF526Q8TF50 670 aaPredicted RBP26.4■■□□□ 1.82
RAP1B-227ENST00000542018 HMGB2P26583 209 aaKnown RBP26.39■■□□□ 1.82
RAP1B-227ENST00000542018 LOC102724428A0A0B4J2F2 783 aa26.37■■□□□ 1.81
RAP1B-227ENST00000542018 SIK1P57059 783 aa26.37■■□□□ 1.81
RAP1B-227ENST00000542018 ITPK1Q13572 414 aa26.37■■□□□ 1.81
RAP1B-227ENST00000542018 HSPA6P17066 643 aa26.36■■□□□ 1.81
RAP1B-227ENST00000542018 SSFA2P28290 1259 aa26.36■■□□□ 1.81
RAP1B-227ENST00000542018 KIAA1551Q9HCM1 1747 aa26.36■■□□□ 1.81
RAP1B-227ENST00000542018 NSD3Q9BZ95 1437 aa26.35■■□□□ 1.81
RAP1B-227ENST00000542018 ASAP1Q9ULH1 1129 aa26.35■■□□□ 1.81
RAP1B-227ENST00000542018 CICQ96RK0 1608 aaPredicted RBP26.35■■□□□ 1.81
RAP1B-227ENST00000542018 KIF13BQ9NQT8 1826 aa26.34■■□□□ 1.81
RAP1B-227ENST00000542018 EYA1Q99502 592 aa26.33■■□□□ 1.81
RAP1B-227ENST00000542018 KIF3CO14782 793 aa26.32■■□□□ 1.8
RAP1B-227ENST00000542018 WASHC2AQ641Q2 1341 aa26.32■■□□□ 1.8
RAP1B-227ENST00000542018 SPG7Q9UQ90 795 aa26.31■■□□□ 1.8
RAP1B-227ENST00000542018 GNPATO15228 680 aa26.3■■□□□ 1.8
RAP1B-227ENST00000542018 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.3■■□□□ 1.8
RAP1B-227ENST00000542018 PXDNLA1KZ92 1463 aa26.3■■□□□ 1.8
RAP1B-227ENST00000542018 N4BP2Q86UW6 1770 aaPredicted RBP26.29■■□□□ 1.8
RAP1B-227ENST00000542018 PPM1GO15355 546 aaPredicted RBP26.29■■□□□ 1.8
RAP1B-227ENST00000542018 PHKG2P15735 406 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms