RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 BCL11BQ9C0K0 894 aaPredicted RBP17.48■□□□□ 0.39
GCFC2-211ENST00000541687 CWC22Q9HCG8 908 aaKnown RBP17.48■□□□□ 0.39
GCFC2-211ENST00000541687 TTC37Q6PGP7 1564 aa17.47■□□□□ 0.39
GCFC2-211ENST00000541687 KDM5DQ9BY66 1539 aa17.47■□□□□ 0.39
GCFC2-211ENST00000541687 SDSP20132 328 aa17.47■□□□□ 0.39
GCFC2-211ENST00000541687 XRCC6P12956 609 aaKnown RBP eCLIP17.47■□□□□ 0.39
GCFC2-211ENST00000541687 FLIIQ13045 1269 aa17.47■□□□□ 0.39
GCFC2-211ENST00000541687 EIF4A2Q14240 407 aaKnown RBP17.47■□□□□ 0.39
GCFC2-211ENST00000541687 THEMISQ8N1K5 641 aaPredicted RBP17.47■□□□□ 0.39
GCFC2-211ENST00000541687 PLEKHO1Q53GL0 409 aaPredicted RBP17.46■□□□□ 0.39
GCFC2-211ENST00000541687 ADCY10Q96PN6 1610 aa17.46■□□□□ 0.39
GCFC2-211ENST00000541687 SYCE3A1L190 88 aa17.46■□□□□ 0.39
GCFC2-211ENST00000541687 RNF20Q5VTR2 975 aa17.46■□□□□ 0.39
GCFC2-211ENST00000541687 TTC22Q5TAA0 569 aa17.46■□□□□ 0.39
GCFC2-211ENST00000541687 DNAJC2Q99543 621 aaKnown RBP17.46■□□□□ 0.39
GCFC2-211ENST00000541687 GDPD2Q9HCC8 539 aa17.46■□□□□ 0.39
GCFC2-211ENST00000541687 MCM2P49736 904 aa17.46■□□□□ 0.38
GCFC2-211ENST00000541687 STK3Q13188 491 aa17.45■□□□□ 0.38
GCFC2-211ENST00000541687 MBD3O95983 291 aa17.45■□□□□ 0.38
GCFC2-211ENST00000541687 TAF7Q15545 349 aaPredicted RBP17.45■□□□□ 0.38
GCFC2-211ENST00000541687 BTBD11A6QL63 1104 aa17.45■□□□□ 0.38
GCFC2-211ENST00000541687 ZBTB7BO15156 539 aaPredicted RBP17.45■□□□□ 0.38
GCFC2-211ENST00000541687 ARHGAP45Q92619 1136 aa17.45■□□□□ 0.38
GCFC2-211ENST00000541687 PPIP5K1Q6PFW1 1433 aa17.45■□□□□ 0.38
GCFC2-211ENST00000541687 OTUD7AQ8TE49 926 aaPredicted RBP17.44■□□□□ 0.38
GCFC2-211ENST00000541687 ZC3H6P61129 1189 aaKnown RBP17.44■□□□□ 0.38
GCFC2-211ENST00000541687 ERVK-7P63135 1459 aa17.44■□□□□ 0.38
GCFC2-211ENST00000541687 INSRP06213 1382 aa17.44■□□□□ 0.38
GCFC2-211ENST00000541687 CCDC173Q0VFZ6 552 aa17.44■□□□□ 0.38
GCFC2-211ENST00000541687 MPRIPQ6WCQ1 1025 aa17.44■□□□□ 0.38
GCFC2-211ENST00000541687 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.44■□□□□ 0.38
GCFC2-211ENST00000541687 AACSQ86V21 672 aa17.43■□□□□ 0.38
GCFC2-211ENST00000541687 BAG4O95429 457 aaKnown RBP17.43■□□□□ 0.38
GCFC2-211ENST00000541687 TTC21BQ7Z4L5 1316 aa17.42■□□□□ 0.38
GCFC2-211ENST00000541687 NPATQ14207 1427 aa17.42■□□□□ 0.38
GCFC2-211ENST00000541687 CROCC2H7BZ55 1655 aa17.42■□□□□ 0.38
GCFC2-211ENST00000541687 BECN2A8MW95 431 aa17.42■□□□□ 0.38
GCFC2-211ENST00000541687 CDC42BPAQ5VT25 1732 aa17.42■□□□□ 0.38
GCFC2-211ENST00000541687 CEBPZQ03701 1054 aaKnown RBP17.42■□□□□ 0.38
GCFC2-211ENST00000541687 RBM10P98175 930 aaKnown RBP17.41■□□□□ 0.38
GCFC2-211ENST00000541687 JAKMIP1Q96N16 626 aaKnown RBP17.41■□□□□ 0.38
GCFC2-211ENST00000541687 PUS7Q96PZ0 661 aaKnown RBP17.41■□□□□ 0.38
GCFC2-211ENST00000541687 TSPY26PQ9H489 355 aa17.41■□□□□ 0.38
GCFC2-211ENST00000541687 RBM27Q9P2N5 1060 aaKnown RBP17.41■□□□□ 0.38
GCFC2-211ENST00000541687 YTHDC2Q9H6S0 1430 aaKnown RBP17.41■□□□□ 0.38
GCFC2-211ENST00000541687 GOLGA6L19H0YKK7 550 aa17.41■□□□□ 0.38
GCFC2-211ENST00000541687 KDM4AO75164 1064 aa17.41■□□□□ 0.38
GCFC2-211ENST00000541687 ANKRD44Q8N8A2 993 aa17.41■□□□□ 0.38
GCFC2-211ENST00000541687 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.4■□□□□ 0.38
GCFC2-211ENST00000541687 TNNT3P45378 269 aaPredicted RBP17.4■□□□□ 0.38
GCFC2-211ENST00000541687 FERMT3Q86UX7 667 aa17.4■□□□□ 0.38
GCFC2-211ENST00000541687 SPG7Q9UQ90 795 aa17.4■□□□□ 0.38
GCFC2-211ENST00000541687 APPP05067 770 aa17.4■□□□□ 0.38
GCFC2-211ENST00000541687 ZNF592Q92610 1267 aa17.4■□□□□ 0.38
GCFC2-211ENST00000541687 MTHFSDQ2M296 383 aaKnown RBP17.39■□□□□ 0.37
GCFC2-211ENST00000541687 SYTL4Q96C24 671 aaPredicted RBP17.39■□□□□ 0.37
GCFC2-211ENST00000541687 KIF3AQ9Y496 699 aa17.39■□□□□ 0.37
GCFC2-211ENST00000541687 PTPRCP08575 1304 aa17.39■□□□□ 0.37
GCFC2-211ENST00000541687 PLEKHM2Q8IWE5 1019 aa17.39■□□□□ 0.37
GCFC2-211ENST00000541687 CASTP20810 708 aaKnown RBP17.39■□□□□ 0.37
GCFC2-211ENST00000541687 CYP46A1Q9Y6A2 500 aa17.39■□□□□ 0.37
GCFC2-211ENST00000541687 EVA1CP58658 441 aa17.38■□□□□ 0.37
GCFC2-211ENST00000541687 ISY1Q9ULR0 285 aaKnown RBP17.38■□□□□ 0.37
GCFC2-211ENST00000541687 WDR33Q9C0J8 1336 aaKnown RBP17.38■□□□□ 0.37
GCFC2-211ENST00000541687 PROSER2Q86WR7 435 aaPredicted RBP17.38■□□□□ 0.37
GCFC2-211ENST00000541687 ERCC6L2Q5T890 1561 aa17.38■□□□□ 0.37
GCFC2-211ENST00000541687 PRDM15P57071 1507 aaPredicted RBP17.38■□□□□ 0.37
GCFC2-211ENST00000541687 G2E3Q7L622 706 aa17.38■□□□□ 0.37
GCFC2-211ENST00000541687 SPC24Q8NBT2 197 aa17.38■□□□□ 0.37
GCFC2-211ENST00000541687 PDE1AP54750 535 aa17.37■□□□□ 0.37
GCFC2-211ENST00000541687 DCTPP1Q9H773 170 aa17.37■□□□□ 0.37
GCFC2-211ENST00000541687 PI4KAP2A4QPH2 592 aa17.37■□□□□ 0.37
GCFC2-211ENST00000541687 IL13P35225 146 aa17.37■□□□□ 0.37
GCFC2-211ENST00000541687 WASHC4Q2M389 1173 aa17.37■□□□□ 0.37
GCFC2-211ENST00000541687 CEP85Q6P2H3 762 aa17.37■□□□□ 0.37
GCFC2-211ENST00000541687 PPP1R42Q7Z4L9 355 aa17.37■□□□□ 0.37
GCFC2-211ENST00000541687 CCDC83Q8IWF9 413 aa17.37■□□□□ 0.37
GCFC2-211ENST00000541687 PI4KAP1Q8N8J0 262 aa17.37■□□□□ 0.37
GCFC2-211ENST00000541687 RIMS2Q9UQ26 1411 aa17.37■□□□□ 0.37
GCFC2-211ENST00000541687 PRPF40BQ6NWY9 871 aaKnown RBP17.37■□□□□ 0.37
GCFC2-211ENST00000541687 ZGPATQ8N5A5 531 aaKnown RBP17.37■□□□□ 0.37
GCFC2-211ENST00000541687 KIF1BPQ96EK5 621 aa17.37■□□□□ 0.37
GCFC2-211ENST00000541687 ABCC1P33527 1531 aa17.37■□□□□ 0.37
GCFC2-211ENST00000541687 CCDC8Q9H0W5 538 aaPredicted RBP17.36■□□□□ 0.37
GCFC2-211ENST00000541687 CPLX1O14810 134 aa17.36■□□□□ 0.37
GCFC2-211ENST00000541687 BOLA2Q9H3K6 86 aa17.36■□□□□ 0.37
GCFC2-211ENST00000541687 CCDC39Q9UFE4 941 aa17.36■□□□□ 0.37
GCFC2-211ENST00000541687 ATF3P18847 181 aa17.35■□□□□ 0.37
GCFC2-211ENST00000541687 PSMA5P28066 241 aa17.35■□□□□ 0.37
GCFC2-211ENST00000541687 PDRG1Q9NUG6 133 aa17.35■□□□□ 0.37
GCFC2-211ENST00000541687 LARP1BQ659C4 914 aaKnown RBP17.35■□□□□ 0.37
GCFC2-211ENST00000541687 MYO5CQ9NQX4 1742 aa17.35■□□□□ 0.37
GCFC2-211ENST00000541687 SASS6Q6UVJ0 657 aa17.35■□□□□ 0.37
GCFC2-211ENST00000541687 CREBRFQ8IUR6 639 aa17.35■□□□□ 0.37
GCFC2-211ENST00000541687 DNAAF4Q8WXU2 420 aa17.34■□□□□ 0.37
GCFC2-211ENST00000541687 PREX2Q70Z35 1606 aa17.34■□□□□ 0.37
GCFC2-211ENST00000541687 JARID2Q92833 1246 aaPredicted RBP17.34■□□□□ 0.37
GCFC2-211ENST00000541687 SNX21Q969T3 373 aa17.34■□□□□ 0.37
GCFC2-211ENST00000541687 TMX3Q96JJ7 454 aa17.33■□□□□ 0.37
GCFC2-211ENST00000541687 CCDC85AQ96PX6 553 aaPredicted RBP17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms