RNA–Protein interactions for RNA: ENST00000541681.1

VEGFB-203, Transcript of vascular endothelial growth factor B, humanhuman

TSL 3

Gene VEGFB, Length 225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-203ENST00000541681 PPP4R2Q9NY27 417 aa8.62□□□□□ -1.03
VEGFB-203ENST00000541681 USP54Q70EL1 1684 aa8.62□□□□□ -1.03
VEGFB-203ENST00000541681 RGPD3A6NKT7 1758 aaPredicted RBP8.61□□□□□ -1.03
VEGFB-203ENST00000541681 RGPD4Q7Z3J3 1758 aa8.61□□□□□ -1.03
VEGFB-203ENST00000541681 ABCC6O95255 1503 aa8.61□□□□□ -1.03
VEGFB-203ENST00000541681 NLRP2Q9NX02 1062 aa8.61□□□□□ -1.03
VEGFB-203ENST00000541681 SALL2Q9Y467 1007 aaPredicted RBP8.61□□□□□ -1.03
VEGFB-203ENST00000541681 COL3A1P02461 1466 aaPredicted RBP8.61□□□□□ -1.03
VEGFB-203ENST00000541681 TNS2Q63HR2 1409 aa8.61□□□□□ -1.03
VEGFB-203ENST00000541681 GOLGA2Q08379 1002 aa8.6□□□□□ -1.03
VEGFB-203ENST00000541681 TRMT2AQ8IZ69 625 aaKnown RBP8.6□□□□□ -1.03
VEGFB-203ENST00000541681 RUNDC1Q96C34 613 aa8.6□□□□□ -1.03
VEGFB-203ENST00000541681 LTV1Q96GA3 475 aaPredicted RBP8.6□□□□□ -1.03
VEGFB-203ENST00000541681 CARD10Q9BWT7 1032 aa8.6□□□□□ -1.03
VEGFB-203ENST00000541681 GGNBP2Q9H3C7 697 aa8.6□□□□□ -1.03
VEGFB-203ENST00000541681 PPP1R1BQ9UD71 204 aaPredicted RBP8.6□□□□□ -1.03
VEGFB-203ENST00000541681 RCAN3Q9UKA8 241 aa8.6□□□□□ -1.03
VEGFB-203ENST00000541681 APAF1O14727 1248 aa8.59□□□□□ -1.03
VEGFB-203ENST00000541681 TNNT2P45379 298 aaPredicted RBP8.59□□□□□ -1.03
VEGFB-203ENST00000541681 SLFN5Q08AF3 891 aa8.59□□□□□ -1.03
VEGFB-203ENST00000541681 PTF1AQ7RTS3 328 aa8.59□□□□□ -1.03
VEGFB-203ENST00000541681 MARCH10Q8NA82 808 aaPredicted RBP8.59□□□□□ -1.03
VEGFB-203ENST00000541681 CDCA7LQ96GN5 454 aa8.59□□□□□ -1.03
VEGFB-203ENST00000541681 CDCA7Q9BWT1 371 aaPredicted RBP8.59□□□□□ -1.03
VEGFB-203ENST00000541681 BCL11BQ9C0K0 894 aaPredicted RBP8.59□□□□□ -1.03
VEGFB-203ENST00000541681 USP31Q70CQ4 1352 aa8.59□□□□□ -1.03
VEGFB-203ENST00000541681 NHSQ6T4R5 1651 aa8.59□□□□□ -1.03
VEGFB-203ENST00000541681 SENP3-EIF4A1A0A087X0R7 540 aa8.58□□□□□ -1.04
VEGFB-203ENST00000541681 IRX6P78412 446 aaPredicted RBP8.58□□□□□ -1.04
VEGFB-203ENST00000541681 ANKRD24Q8TF21 1146 aa8.58□□□□□ -1.04
VEGFB-203ENST00000541681 ACSBG1Q96GR2 724 aa8.58□□□□□ -1.04
VEGFB-203ENST00000541681 PNNQ9H307 717 aaKnown RBP8.58□□□□□ -1.04
VEGFB-203ENST00000541681 FAM208AQ9UK61 1670 aaKnown RBP8.58□□□□□ -1.04
VEGFB-203ENST00000541681 ERBB3P21860 1342 aa8.57□□□□□ -1.04
VEGFB-203ENST00000541681 EXOC5O00471 708 aa8.57□□□□□ -1.04
VEGFB-203ENST00000541681 CCDC27Q2M243 656 aa8.57□□□□□ -1.04
VEGFB-203ENST00000541681 DUSP27Q5VZP5 1158 aa8.57□□□□□ -1.04
VEGFB-203ENST00000541681 CCDC146Q8IYE0 955 aa8.57□□□□□ -1.04
VEGFB-203ENST00000541681 ANO8Q9HCE9 1232 aaPredicted RBP8.57□□□□□ -1.04
VEGFB-203ENST00000541681 BTAF1O14981 1849 aa8.57□□□□□ -1.04
VEGFB-203ENST00000541681 CASZ1Q86V15 1759 aa8.56□□□□□ -1.04
VEGFB-203ENST00000541681 E9PSI1 815 aa8.56□□□□□ -1.04
VEGFB-203ENST00000541681 DIAPH1O60610 1272 aaKnown RBP8.56□□□□□ -1.04
VEGFB-203ENST00000541681 IL2RBP14784 551 aa8.56□□□□□ -1.04
VEGFB-203ENST00000541681 RRP1P56182 461 aaKnown RBP8.56□□□□□ -1.04
VEGFB-203ENST00000541681 WDR63Q8IWG1 891 aa8.56□□□□□ -1.04
VEGFB-203ENST00000541681 COG3Q96JB2 828 aa8.56□□□□□ -1.04
VEGFB-203ENST00000541681 SPON1Q9HCB6 807 aa8.56□□□□□ -1.04
VEGFB-203ENST00000541681 KAT6BQ8WYB5 2073 aa8.56□□□□□ -1.04
VEGFB-203ENST00000541681 CACNA1FO60840 1977 aa8.55□□□□□ -1.04
VEGFB-203ENST00000541681 DOT1LQ8TEK3 1739 aa8.55□□□□□ -1.04
VEGFB-203ENST00000541681 KCNQ2O43526 872 aa8.55□□□□□ -1.04
VEGFB-203ENST00000541681 ZBTB7AO95365 584 aa8.55□□□□□ -1.04
VEGFB-203ENST00000541681 U2AF1L5P0DN76 240 aaPredicted RBP8.55□□□□□ -1.04
VEGFB-203ENST00000541681 U2AF1Q01081 240 aaKnown RBP eCLIP8.55□□□□□ -1.04
VEGFB-203ENST00000541681 WWC1Q8IX03 1113 aa8.55□□□□□ -1.04
VEGFB-203ENST00000541681 STK32BQ9NY57 414 aa8.55□□□□□ -1.04
VEGFB-203ENST00000541681 POLKQ9UBT6 870 aa8.55□□□□□ -1.04
VEGFB-203ENST00000541681 RGPD2P0DJD1 1756 aa8.55□□□□□ -1.04
VEGFB-203ENST00000541681 FCHSD2O94868 740 aa8.54□□□□□ -1.04
VEGFB-203ENST00000541681 AMPHP49418 695 aa8.54□□□□□ -1.04
VEGFB-203ENST00000541681 TXNRD1Q16881 649 aa8.54□□□□□ -1.04
VEGFB-203ENST00000541681 VIRMAQ69YN4 1812 aaKnown RBP8.54□□□□□ -1.04
VEGFB-203ENST00000541681 PLSCR1O15162 318 aa8.53□□□□□ -1.04
VEGFB-203ENST00000541681 FBLN1P23142 703 aa8.53□□□□□ -1.04
VEGFB-203ENST00000541681 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.53□□□□□ -1.04
VEGFB-203ENST00000541681 DDX54Q8TDD1 881 aaKnown RBP8.53□□□□□ -1.04
VEGFB-203ENST00000541681 SYTL4Q96C24 671 aaPredicted RBP8.53□□□□□ -1.04
VEGFB-203ENST00000541681 PLEKHF1Q96S99 279 aa8.53□□□□□ -1.04
VEGFB-203ENST00000541681 PDGFDQ9GZP0 370 aaPredicted RBP8.53□□□□□ -1.04
VEGFB-203ENST00000541681 BCL9O00512 1426 aa8.53□□□□□ -1.04
VEGFB-203ENST00000541681 MAP3K19Q56UN5 1328 aa8.53□□□□□ -1.04
VEGFB-203ENST00000541681 PAPPAQ13219 1627 aa8.52□□□□□ -1.05
VEGFB-203ENST00000541681 DCAF8L1A6NGE4 600 aa8.52□□□□□ -1.05
VEGFB-203ENST00000541681 U2SURPO15042 1029 aaKnown RBP8.52□□□□□ -1.05
VEGFB-203ENST00000541681 RRS1Q15050 365 aaKnown RBP8.52□□□□□ -1.05
VEGFB-203ENST00000541681 USHBP1Q8N6Y0 703 aa8.52□□□□□ -1.05
VEGFB-203ENST00000541681 IP6K1Q92551 441 aa8.52□□□□□ -1.05
VEGFB-203ENST00000541681 ATF5Q9Y2D1 282 aaPredicted RBP8.52□□□□□ -1.05
VEGFB-203ENST00000541681 SHANK3Q9BYB0 1731 aa8.51□□□□□ -1.05
VEGFB-203ENST00000541681 MEGF6O75095 1541 aa8.51□□□□□ -1.05
VEGFB-203ENST00000541681 HOXC9P31274 260 aa8.51□□□□□ -1.05
VEGFB-203ENST00000541681 TMPOP42166 694 aaKnown RBP8.51□□□□□ -1.05
VEGFB-203ENST00000541681 PROM2Q8N271 834 aa8.51□□□□□ -1.05
VEGFB-203ENST00000541681 IL16Q14005 1332 aa8.51□□□□□ -1.05
VEGFB-203ENST00000541681 MAPK8IP3Q9UPT6 1336 aa8.51□□□□□ -1.05
VEGFB-203ENST00000541681 RTL1A6NKG5 1358 aa8.5□□□□□ -1.05
VEGFB-203ENST00000541681 NEFMP07197 916 aa8.5□□□□□ -1.05
VEGFB-203ENST00000541681 IL13P35225 146 aa8.5□□□□□ -1.05
VEGFB-203ENST00000541681 SLC15A2Q16348 729 aa8.5□□□□□ -1.05
VEGFB-203ENST00000541681 KLHL34Q8N239 644 aa8.5□□□□□ -1.05
VEGFB-203ENST00000541681 CCDC136Q96JN2 1154 aa8.5□□□□□ -1.05
VEGFB-203ENST00000541681 SPINK5Q9NQ38 1064 aaPredicted RBP8.5□□□□□ -1.05
VEGFB-203ENST00000541681 CT47B1P0C2W7 299 aaPredicted RBP8.49□□□□□ -1.05
VEGFB-203ENST00000541681 YY1P25490 414 aa8.49□□□□□ -1.05
VEGFB-203ENST00000541681 NEUROD2Q15784 382 aa8.49□□□□□ -1.05
VEGFB-203ENST00000541681 B4GALNT3Q6L9W6 998 aa8.49□□□□□ -1.05
VEGFB-203ENST00000541681 RSPH6AQ9H0K4 717 aa8.49□□□□□ -1.05
VEGFB-203ENST00000541681 MYH16Q9H6N6 1097 aa8.49□□□□□ -1.05
VEGFB-203ENST00000541681 EMILIN1Q9Y6C2 1016 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms