RNA–Protein interactions for RNA: ENST00000541600.5

EPHA4-214, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 558 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-214ENST00000541600 PANK3Q9H999 370 aa8.9□□□□□ -0.98
EPHA4-214ENST00000541600 NLRP1Q9C000 1473 aa8.89□□□□□ -0.99
EPHA4-214ENST00000541600 PIK3C2GO75747 1445 aa8.89□□□□□ -0.99
EPHA4-214ENST00000541600 KIF1BO60333 1816 aa8.89□□□□□ -0.99
EPHA4-214ENST00000541600 EIF3AQ14152 1382 aaKnown RBP8.89□□□□□ -0.99
EPHA4-214ENST00000541600 MAP3K7O43318 606 aa8.89□□□□□ -0.99
EPHA4-214ENST00000541600 PHF14O94880 888 aa8.89□□□□□ -0.99
EPHA4-214ENST00000541600 AEBP1Q8IUX7 1158 aa8.89□□□□□ -0.99
EPHA4-214ENST00000541600 NGEFQ8N5V2 710 aa8.89□□□□□ -0.99
EPHA4-214ENST00000541600 L3MBTL3Q96JM7 780 aaPredicted RBP8.89□□□□□ -0.99
EPHA4-214ENST00000541600 PUS7Q96PZ0 661 aaKnown RBP8.89□□□□□ -0.99
EPHA4-214ENST00000541600 SNRKQ9NRH2 765 aa8.89□□□□□ -0.99
EPHA4-214ENST00000541600 DIP2AQ14689 1571 aa8.89□□□□□ -0.99
EPHA4-214ENST00000541600 LRP5O75197 1615 aa8.88□□□□□ -0.99
EPHA4-214ENST00000541600 RPGRIP1LQ68CZ1 1315 aa8.88□□□□□ -0.99
EPHA4-214ENST00000541600 CLK2P49760 499 aaKnown RBP8.88□□□□□ -0.99
EPHA4-214ENST00000541600 ATN1P54259 1190 aaPredicted RBP8.88□□□□□ -0.99
EPHA4-214ENST00000541600 RETREG2Q8NC44 543 aa8.88□□□□□ -0.99
EPHA4-214ENST00000541600 POLR3GLQ9BT43 218 aa8.88□□□□□ -0.99
EPHA4-214ENST00000541600 ZNF330Q9Y3S2 320 aaPredicted RBP8.88□□□□□ -0.99
EPHA4-214ENST00000541600 ARHGAP23Q9P227 1491 aa8.88□□□□□ -0.99
EPHA4-214ENST00000541600 ASXL1Q8IXJ9 1541 aa8.87□□□□□ -0.99
EPHA4-214ENST00000541600 OATP04181 439 aa8.87□□□□□ -0.99
EPHA4-214ENST00000541600 KCNA6P17658 529 aa8.87□□□□□ -0.99
EPHA4-214ENST00000541600 RFC5P40937 340 aa8.87□□□□□ -0.99
EPHA4-214ENST00000541600 POTEHQ6S545 545 aa8.87□□□□□ -0.99
EPHA4-214ENST00000541600 DEFB132Q7Z7B7 95 aa8.87□□□□□ -0.99
EPHA4-214ENST00000541600 METTL3Q86U44 580 aaKnown RBP8.87□□□□□ -0.99
EPHA4-214ENST00000541600 TXNDC2Q86VQ3 553 aa8.87□□□□□ -0.99
EPHA4-214ENST00000541600 ATAD2Q6PL18 1390 aa8.86□□□□□ -0.99
EPHA4-214ENST00000541600 ADGRB3O60242 1522 aa8.86□□□□□ -0.99
EPHA4-214ENST00000541600 KIF3BO15066 747 aa8.86□□□□□ -0.99
EPHA4-214ENST00000541600 KDM5AP29375 1690 aaKnown RBP8.85□□□□□ -0.99
EPHA4-214ENST00000541600 MYOM1P52179 1685 aa8.85□□□□□ -0.99
EPHA4-214ENST00000541600 BCL9LQ86UU0 1499 aa8.85□□□□□ -0.99
EPHA4-214ENST00000541600 PLCG2P16885 1265 aa8.85□□□□□ -0.99
EPHA4-214ENST00000541600 YY1P25490 414 aa8.85□□□□□ -0.99
EPHA4-214ENST00000541600 RRP1P56182 461 aaKnown RBP8.85□□□□□ -0.99
EPHA4-214ENST00000541600 IRX6P78412 446 aaPredicted RBP8.85□□□□□ -0.99
EPHA4-214ENST00000541600 TMEM259Q4ZIN3 620 aa8.85□□□□□ -0.99
EPHA4-214ENST00000541600 SHPRHQ149N8 1683 aa8.85□□□□□ -0.99
EPHA4-214ENST00000541600 PSDA5PKW4 1024 aaPredicted RBP8.84□□□□□ -0.99
EPHA4-214ENST00000541600 PPP2R1AP30153 589 aa8.84□□□□□ -0.99
EPHA4-214ENST00000541600 ARHGAP31Q2M1Z3 1444 aa8.84□□□□□ -0.99
EPHA4-214ENST00000541600 TSR1Q2NL82 804 aaKnown RBP8.84□□□□□ -0.99
EPHA4-214ENST00000541600 B4GALNT3Q6L9W6 998 aa8.84□□□□□ -0.99
EPHA4-214ENST00000541600 SLAIN1Q8ND83 568 aa8.84□□□□□ -0.99
EPHA4-214ENST00000541600 SLC26A8Q96RN1 970 aa8.84□□□□□ -0.99
EPHA4-214ENST00000541600 TBC1D2Q9BYX2 928 aa8.84□□□□□ -0.99
EPHA4-214ENST00000541600 RCAN3Q9UKA8 241 aa8.84□□□□□ -0.99
EPHA4-214ENST00000541600 KNSTRNQ9Y448 316 aa8.84□□□□□ -0.99
EPHA4-214ENST00000541600 PCDHGA10Q9Y5H3 936 aa8.84□□□□□ -0.99
EPHA4-214ENST00000541600 ZNF521Q96K83 1311 aa8.83□□□□□ -1
EPHA4-214ENST00000541600 NOS1P29475 1434 aa8.83□□□□□ -1
EPHA4-214ENST00000541600 ATMINO43313 823 aaPredicted RBP8.83□□□□□ -1
EPHA4-214ENST00000541600 SLC34A2O95436 690 aa8.83□□□□□ -1
EPHA4-214ENST00000541600 DIXDC1Q155Q3 683 aa8.83□□□□□ -1
EPHA4-214ENST00000541600 FAM161AQ3B820 660 aa8.83□□□□□ -1
EPHA4-214ENST00000541600 PPP2R2DQ66LE6 453 aa8.83□□□□□ -1
EPHA4-214ENST00000541600 PXYLP1Q8TE99 480 aa8.83□□□□□ -1
EPHA4-214ENST00000541600 NLRP7Q8WX94 980 aa8.83□□□□□ -1
EPHA4-214ENST00000541600 C8orf37Q96NL8 207 aa8.83□□□□□ -1
EPHA4-214ENST00000541600 C14orf93Q9H972 538 aaKnown RBP8.83□□□□□ -1
EPHA4-214ENST00000541600 SLIT1O75093 1534 aa8.83□□□□□ -1
EPHA4-214ENST00000541600 PPLO60437 1756 aa8.83□□□□□ -1
EPHA4-214ENST00000541600 ERVK-7P63135 1459 aa8.83□□□□□ -1
EPHA4-214ENST00000541600 UBR1Q8IWV7 1749 aa8.83□□□□□ -1
EPHA4-214ENST00000541600 ZFYVE9O95405 1425 aa8.82□□□□□ -1
EPHA4-214ENST00000541600 IRF5Q13568 498 aa8.82□□□□□ -1
EPHA4-214ENST00000541600 ASTLQ6HA08 431 aaPredicted RBP8.82□□□□□ -1
EPHA4-214ENST00000541600 TYW1BQ6NUM6 668 aa8.82□□□□□ -1
EPHA4-214ENST00000541600 TRMT2AQ8IZ69 625 aaKnown RBP8.82□□□□□ -1
EPHA4-214ENST00000541600 RGS22Q8NE09 1264 aa8.82□□□□□ -1
EPHA4-214ENST00000541600 CCDC136Q96JN2 1154 aa8.82□□□□□ -1
EPHA4-214ENST00000541600 ADGRG1Q9Y653 693 aa8.82□□□□□ -1
EPHA4-214ENST00000541600 AHDC1Q5TGY3 1603 aaPredicted RBP8.82□□□□□ -1
EPHA4-214ENST00000541600 PIK3C2BO00750 1634 aa8.81□□□□□ -1
EPHA4-214ENST00000541600 CLCN6P51797 869 aa8.81□□□□□ -1
EPHA4-214ENST00000541600 TMCO4Q5TGY1 634 aa8.81□□□□□ -1
EPHA4-214ENST00000541600 MTMR14Q8NCE2 650 aa8.81□□□□□ -1
EPHA4-214ENST00000541600 ABCC3O15438 1527 aa8.8□□□□□ -1
EPHA4-214ENST00000541600 USP32Q8NFA0 1604 aa8.8□□□□□ -1
EPHA4-214ENST00000541600 CC2D1BQ5T0F9 858 aaKnown RBP8.8□□□□□ -1
EPHA4-214ENST00000541600 BRINP3Q76B58 766 aa8.8□□□□□ -1
EPHA4-214ENST00000541600 DDX17Q92841 729 aaKnown RBP8.8□□□□□ -1
EPHA4-214ENST00000541600 FBXW7Q969H0 707 aa8.8□□□□□ -1
EPHA4-214ENST00000541600 GDPD2Q9HCC8 539 aa8.8□□□□□ -1
EPHA4-214ENST00000541600 LIMD1Q9UGP4 676 aa8.8□□□□□ -1
EPHA4-214ENST00000541600 ADGRB1O14514 1584 aa8.8□□□□□ -1
EPHA4-214ENST00000541600 ADGRF5Q8IZF2 1346 aa8.8□□□□□ -1
EPHA4-214ENST00000541600 POLR3AO14802 1390 aaPredicted RBP8.79□□□□□ -1
EPHA4-214ENST00000541600 TCERG1O14776 1098 aaKnown RBP8.79□□□□□ -1
EPHA4-214ENST00000541600 WWC1Q8IX03 1113 aa8.79□□□□□ -1
EPHA4-214ENST00000541600 GZF1Q9H116 711 aaPredicted RBP8.79□□□□□ -1
EPHA4-214ENST00000541600 ADAMTS8Q9UP79 889 aa8.79□□□□□ -1
EPHA4-214ENST00000541600 MSH6P52701 1360 aa8.78□□□□□ -1
EPHA4-214ENST00000541600 TUSC1Q2TAM9 212 aa8.78□□□□□ -1
EPHA4-214ENST00000541600 CFAP70Q5T0N1 1121 aa8.78□□□□□ -1
EPHA4-214ENST00000541600 PADI6Q6TGC4 694 aa8.78□□□□□ -1
EPHA4-214ENST00000541600 CCDC125Q86Z20 511 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms