RNA–Protein interactions for RNA: ENST00000541453.1

GABARAPL1-209, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 3

Gene GABARAPL1, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-209ENST00000541453 PLEKHG2Q9H7P9 1386 aa14.38□□□□□ -0.11
GABARAPL1-209ENST00000541453 TATP17735 454 aaPredicted RBP14.38□□□□□ -0.11
GABARAPL1-209ENST00000541453 VPS72Q15906 364 aa14.38□□□□□ -0.11
GABARAPL1-209ENST00000541453 THRAP3Q9Y2W1 955 aaKnown RBP14.38□□□□□ -0.11
GABARAPL1-209ENST00000541453 CCDC9Q9Y3X0 531 aaKnown RBP14.38□□□□□ -0.11
GABARAPL1-209ENST00000541453 WNK3Q9BYP7 1800 aa14.37□□□□□ -0.11
GABARAPL1-209ENST00000541453 HNRNPUQ00839 825 aaKnown RBP eCLIP14.37□□□□□ -0.11
GABARAPL1-209ENST00000541453 TCP11L2Q8N4U5 519 aa14.37□□□□□ -0.11
GABARAPL1-209ENST00000541453 NGEFQ8N5V2 710 aa14.37□□□□□ -0.11
GABARAPL1-209ENST00000541453 USP35Q9P2H5 1018 aa14.37□□□□□ -0.11
GABARAPL1-209ENST00000541453 APAF1O14727 1248 aa14.36□□□□□ -0.11
GABARAPL1-209ENST00000541453 IL2RBP14784 551 aa14.36□□□□□ -0.11
GABARAPL1-209ENST00000541453 AMOTQ4VCS5 1084 aa14.36□□□□□ -0.11
GABARAPL1-209ENST00000541453 PLEKHO1Q53GL0 409 aaPredicted RBP14.36□□□□□ -0.11
GABARAPL1-209ENST00000541453 PHACTR3Q96KR7 559 aa14.36□□□□□ -0.11
GABARAPL1-209ENST00000541453 YTHDC1Q96MU7 727 aaKnown RBP14.36□□□□□ -0.11
GABARAPL1-209ENST00000541453 TRPC5Q9UL62 973 aaPredicted RBP14.36□□□□□ -0.11
GABARAPL1-209ENST00000541453 DLG5Q8TDM6 1919 aa14.36□□□□□ -0.11
GABARAPL1-209ENST00000541453 SPATA31A1Q5TZJ5 1347 aa14.36□□□□□ -0.11
GABARAPL1-209ENST00000541453 SPATA31A5Q5VU36 1347 aa14.36□□□□□ -0.11
GABARAPL1-209ENST00000541453 SPATA31A7Q8IWB4 1347 aa14.36□□□□□ -0.11
GABARAPL1-209ENST00000541453 ZNF772Q68DY9 489 aaPredicted RBP14.35□□□□□ -0.11
GABARAPL1-209ENST00000541453 GAS2L2Q8NHY3 880 aa14.35□□□□□ -0.11
GABARAPL1-209ENST00000541453 CDCA7Q9BWT1 371 aaPredicted RBP14.35□□□□□ -0.11
GABARAPL1-209ENST00000541453 NFE2L2Q16236 605 aa14.34□□□□□ -0.11
GABARAPL1-209ENST00000541453 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.34□□□□□ -0.11
GABARAPL1-209ENST00000541453 PKD1L3Q7Z443 1732 aa14.33□□□□□ -0.12
GABARAPL1-209ENST00000541453 MEGF6O75095 1541 aa14.33□□□□□ -0.12
GABARAPL1-209ENST00000541453 TMPOP42166 694 aaKnown RBP14.33□□□□□ -0.12
GABARAPL1-209ENST00000541453 NEUROD2Q15784 382 aa14.33□□□□□ -0.12
GABARAPL1-209ENST00000541453 BARGINQ6ZT62 677 aa14.33□□□□□ -0.12
GABARAPL1-209ENST00000541453 QTRT2Q9H974 415 aaKnown RBP14.33□□□□□ -0.12
GABARAPL1-209ENST00000541453 SPG7Q9UQ90 795 aa14.33□□□□□ -0.12
GABARAPL1-209ENST00000541453 U3KPZ7 1027 aaPredicted RBP14.33□□□□□ -0.12
GABARAPL1-209ENST00000541453 ATRNO75882 1429 aa14.32□□□□□ -0.12
GABARAPL1-209ENST00000541453 RIPK4P57078 832 aa14.32□□□□□ -0.12
GABARAPL1-209ENST00000541453 MTHFSDQ2M296 383 aaKnown RBP14.32□□□□□ -0.12
GABARAPL1-209ENST00000541453 GJD4Q96KN9 370 aaPredicted RBP14.32□□□□□ -0.12
GABARAPL1-209ENST00000541453 OVOS2A0A0G2JMS6 1433 aa14.32□□□□□ -0.12
GABARAPL1-209ENST00000541453 LMOD3Q0VAK6 560 aa14.31□□□□□ -0.12
GABARAPL1-209ENST00000541453 ZCRB1Q8TBF4 217 aaKnown RBP14.31□□□□□ -0.12
GABARAPL1-209ENST00000541453 RRP7AQ9Y3A4 280 aaKnown RBP14.31□□□□□ -0.12
GABARAPL1-209ENST00000541453 SALL2Q9Y467 1007 aaPredicted RBP14.31□□□□□ -0.12
GABARAPL1-209ENST00000541453 DISP2A7MBM2 1401 aa14.31□□□□□ -0.12
GABARAPL1-209ENST00000541453 VIRMAQ69YN4 1812 aaKnown RBP14.3□□□□□ -0.12
GABARAPL1-209ENST00000541453 CCDC27Q2M243 656 aa14.3□□□□□ -0.12
GABARAPL1-209ENST00000541453 C1orf141Q5JVX7 400 aa14.3□□□□□ -0.12
GABARAPL1-209ENST00000541453 ZNF530Q6P9A1 599 aaPredicted RBP14.3□□□□□ -0.12
GABARAPL1-209ENST00000541453 ZBED9Q6R2W3 1325 aa14.3□□□□□ -0.12
GABARAPL1-209ENST00000541453 SENP3-EIF4A1A0A087X0R7 540 aa14.29□□□□□ -0.12
GABARAPL1-209ENST00000541453 GNAT3A8MTJ3 354 aa14.29□□□□□ -0.12
GABARAPL1-209ENST00000541453 EXOC5O00471 708 aa14.29□□□□□ -0.12
GABARAPL1-209ENST00000541453 HTATSF1O43719 755 aaKnown RBP14.29□□□□□ -0.12
GABARAPL1-209ENST00000541453 AKAP4Q5JQC9 854 aa14.29□□□□□ -0.12
GABARAPL1-209ENST00000541453 RTF1Q92541 710 aaKnown RBP14.29□□□□□ -0.12
GABARAPL1-209ENST00000541453 PCDH11XQ9BZA7 1347 aa14.29□□□□□ -0.12
GABARAPL1-209ENST00000541453 PCDH11YQ9BZA8 1340 aa14.29□□□□□ -0.12
GABARAPL1-209ENST00000541453 GLI3P10071 1580 aa14.29□□□□□ -0.12
GABARAPL1-209ENST00000541453 DDB1Q16531 1140 aa14.28□□□□□ -0.12
GABARAPL1-209ENST00000541453 FAM98CQ17RN3 349 aaKnown RBP14.28□□□□□ -0.12
GABARAPL1-209ENST00000541453 IFNL2Q8IZJ0 200 aa14.28□□□□□ -0.12
GABARAPL1-209ENST00000541453 SHANK3Q9BYB0 1731 aa14.27□□□□□ -0.12
GABARAPL1-209ENST00000541453 MAP3K5Q99683 1374 aa14.27□□□□□ -0.12
GABARAPL1-209ENST00000541453 HSP90AB1P08238 724 aaKnown RBP14.27□□□□□ -0.13
GABARAPL1-209ENST00000541453 SAMD1Q6SPF0 538 aaPredicted RBP14.27□□□□□ -0.13
GABARAPL1-209ENST00000541453 LRRC37A3O60309 1634 aa14.26□□□□□ -0.13
GABARAPL1-209ENST00000541453 A0A0G2JS52 829 aa14.26□□□□□ -0.13
GABARAPL1-209ENST00000541453 RBM6P78332 1123 aaKnown RBP14.26□□□□□ -0.13
GABARAPL1-209ENST00000541453 MYT1Q01538 1121 aa14.26□□□□□ -0.13
GABARAPL1-209ENST00000541453 CALD1Q05682 793 aaKnown RBP14.26□□□□□ -0.13
GABARAPL1-209ENST00000541453 WWC1Q8IX03 1113 aa14.26□□□□□ -0.13
GABARAPL1-209ENST00000541453 TRIM35Q9UPQ4 493 aa14.26□□□□□ -0.13
GABARAPL1-209ENST00000541453 THSD7AQ9UPZ6 1657 aa14.26□□□□□ -0.13
GABARAPL1-209ENST00000541453 TNS2Q63HR2 1409 aa14.25□□□□□ -0.13
GABARAPL1-209ENST00000541453 SCN11AQ9UI33 1791 aa14.25□□□□□ -0.13
GABARAPL1-209ENST00000541453 ONECUT3O60422 494 aaPredicted RBP14.25□□□□□ -0.13
GABARAPL1-209ENST00000541453 PHKG2P15735 406 aa14.25□□□□□ -0.13
GABARAPL1-209ENST00000541453 WDR63Q8IWG1 891 aa14.25□□□□□ -0.13
GABARAPL1-209ENST00000541453 DDX54Q8TDD1 881 aaKnown RBP14.25□□□□□ -0.13
GABARAPL1-209ENST00000541453 CYP27B1O15528 508 aa14.24□□□□□ -0.13
GABARAPL1-209ENST00000541453 PDE3BQ13370 1112 aa14.24□□□□□ -0.13
GABARAPL1-209ENST00000541453 ZNF521Q96K83 1311 aa14.23□□□□□ -0.13
GABARAPL1-209ENST00000541453 RXRBP28702 533 aa14.23□□□□□ -0.13
GABARAPL1-209ENST00000541453 GOLGA2Q08379 1002 aa14.23□□□□□ -0.13
GABARAPL1-209ENST00000541453 DCAF5Q96JK2 942 aa14.23□□□□□ -0.13
GABARAPL1-209ENST00000541453 NKX1-1Q15270 411 aaPredicted RBP14.22□□□□□ -0.13
GABARAPL1-209ENST00000541453 MPRIPQ6WCQ1 1025 aa14.22□□□□□ -0.13
GABARAPL1-209ENST00000541453 MCM10Q7L590 875 aa14.22□□□□□ -0.13
GABARAPL1-209ENST00000541453 ADAMTS7Q9UKP4 1686 aa14.22□□□□□ -0.13
GABARAPL1-209ENST00000541453 IL16Q14005 1332 aa14.21□□□□□ -0.13
GABARAPL1-209ENST00000541453 RNMTO43148 476 aaKnown RBP14.21□□□□□ -0.13
GABARAPL1-209ENST00000541453 TEFQ10587 303 aa14.21□□□□□ -0.13
GABARAPL1-209ENST00000541453 DCTN1Q14203 1278 aa14.21□□□□□ -0.13
GABARAPL1-209ENST00000541453 ILDR2Q71H61 639 aa14.21□□□□□ -0.13
GABARAPL1-209ENST00000541453 SEPT12Q8IYM1 358 aa14.21□□□□□ -0.13
GABARAPL1-209ENST00000541453 IL17REQ8NFR9 667 aa14.21□□□□□ -0.13
GABARAPL1-209ENST00000541453 RGS17Q9UGC6 210 aaPredicted RBP14.21□□□□□ -0.13
GABARAPL1-209ENST00000541453 KAT6BQ8WYB5 2073 aa14.21□□□□□ -0.14
GABARAPL1-209ENST00000541453 CEMIPQ8WUJ3 1361 aa14.21□□□□□ -0.14
GABARAPL1-209ENST00000541453 LGR6Q9HBX8 967 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms