RNA–Protein interactions for RNA: ENST00000541371.5

PRPF19-206, Transcript of pre-mRNA processing factor 19, humanhuman

TSL 3

Gene PRPF19, Length 943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF19-206ENST00000541371 RAPGEF4Q8WZA2 1011 aa18.43■□□□□ 0.54
PRPF19-206ENST00000541371 NBPF4Q96M43 638 aa18.43■□□□□ 0.54
PRPF19-206ENST00000541371 ARXQ96QS3 562 aa18.43■□□□□ 0.54
PRPF19-206ENST00000541371 PAPPAQ13219 1627 aa18.42■□□□□ 0.54
PRPF19-206ENST00000541371 USHBP1Q8N6Y0 703 aa18.42■□□□□ 0.54
PRPF19-206ENST00000541371 AKT1S1Q96B36 256 aa18.42■□□□□ 0.54
PRPF19-206ENST00000541371 MEGF6O75095 1541 aa18.42■□□□□ 0.54
PRPF19-206ENST00000541371 CGNL1Q0VF96 1302 aa18.42■□□□□ 0.54
PRPF19-206ENST00000541371 TFCP2L1Q9NZI6 479 aa18.41■□□□□ 0.54
PRPF19-206ENST00000541371 TATP17735 454 aaPredicted RBP18.4■□□□□ 0.54
PRPF19-206ENST00000541371 KCNQ4P56696 695 aa18.4■□□□□ 0.54
PRPF19-206ENST00000541371 HSP90AB2PQ58FF8 381 aa18.4■□□□□ 0.54
PRPF19-206ENST00000541371 SLC16A10Q8TF71 515 aa18.4■□□□□ 0.54
PRPF19-206ENST00000541371 RGPD2P0DJD1 1756 aa18.39■□□□□ 0.53
PRPF19-206ENST00000541371 INSRP06213 1382 aa18.39■□□□□ 0.53
PRPF19-206ENST00000541371 CCNL1Q9UK58 526 aaPredicted RBP18.38■□□□□ 0.53
PRPF19-206ENST00000541371 TIMELESSQ9UNS1 1208 aa18.38■□□□□ 0.53
PRPF19-206ENST00000541371 POLD1P28340 1107 aa18.37■□□□□ 0.53
PRPF19-206ENST00000541371 CARD14Q9BXL6 1004 aa18.37■□□□□ 0.53
PRPF19-206ENST00000541371 PNPLA7Q6ZV29 1317 aa18.37■□□□□ 0.53
PRPF19-206ENST00000541371 NSD2O96028 1365 aa18.37■□□□□ 0.53
PRPF19-206ENST00000541371 FLT4P35916 1363 aa18.37■□□□□ 0.53
PRPF19-206ENST00000541371 KIF24Q5T7B8 1368 aa18.36■□□□□ 0.53
PRPF19-206ENST00000541371 DOT1LQ8TEK3 1739 aa18.36■□□□□ 0.53
PRPF19-206ENST00000541371 PCDH11XQ9BZA7 1347 aa18.35■□□□□ 0.53
PRPF19-206ENST00000541371 PCDH11YQ9BZA8 1340 aa18.35■□□□□ 0.53
PRPF19-206ENST00000541371 KLHL34Q8N239 644 aa18.35■□□□□ 0.53
PRPF19-206ENST00000541371 NSD3Q9BZ95 1437 aa18.34■□□□□ 0.53
PRPF19-206ENST00000541371 MAP3K5Q99683 1374 aa18.34■□□□□ 0.53
PRPF19-206ENST00000541371 PPM1GO15355 546 aaPredicted RBP18.34■□□□□ 0.53
PRPF19-206ENST00000541371 EMILIN1Q9Y6C2 1016 aa18.34■□□□□ 0.53
PRPF19-206ENST00000541371 KIF20BQ96Q89 1820 aa18.34■□□□□ 0.53
PRPF19-206ENST00000541371 SHANK3Q9BYB0 1731 aa18.34■□□□□ 0.53
PRPF19-206ENST00000541371 MSH5O43196 834 aa18.33■□□□□ 0.52
PRPF19-206ENST00000541371 PCGF6Q9BYE7 350 aa18.32■□□□□ 0.52
PRPF19-206ENST00000541371 HMGB2P26583 209 aaKnown RBP18.31■□□□□ 0.52
PRPF19-206ENST00000541371 GPR162Q16538 588 aa18.31■□□□□ 0.52
PRPF19-206ENST00000541371 MPRIPQ6WCQ1 1025 aa18.31■□□□□ 0.52
PRPF19-206ENST00000541371 POLR3GLQ9BT43 218 aa18.31■□□□□ 0.52
PRPF19-206ENST00000541371 LY75O60449 1722 aa18.31■□□□□ 0.52
PRPF19-206ENST00000541371 QSER1Q2KHR3 1735 aa18.3■□□□□ 0.52
PRPF19-206ENST00000541371 CLSPNQ9HAW4 1339 aa18.29■□□□□ 0.52
PRPF19-206ENST00000541371 CYP27B1O15528 508 aa18.29■□□□□ 0.52
PRPF19-206ENST00000541371 ZNF784Q8NCA9 323 aaPredicted RBP18.29■□□□□ 0.52
PRPF19-206ENST00000541371 IFFO2Q5TF58 517 aa18.28■□□□□ 0.52
PRPF19-206ENST00000541371 COL23A1Q86Y22 540 aaPredicted RBP18.28■□□□□ 0.52
PRPF19-206ENST00000541371 PALLDQ8WX93 1383 aa18.28■□□□□ 0.52
PRPF19-206ENST00000541371 WASHC2AQ641Q2 1341 aa18.27■□□□□ 0.52
PRPF19-206ENST00000541371 PELP1Q8IZL8 1130 aaKnown RBP18.27■□□□□ 0.52
PRPF19-206ENST00000541371 SMARCC1Q92922 1105 aaPredicted RBP18.27■□□□□ 0.52
PRPF19-206ENST00000541371 SPG7Q9UQ90 795 aa18.27■□□□□ 0.52
PRPF19-206ENST00000541371 FLAD1Q8NFF5 587 aa18.25■□□□□ 0.51
PRPF19-206ENST00000541371 EYA1Q99502 592 aa18.25■□□□□ 0.51
PRPF19-206ENST00000541371 TUBGCP6Q96RT7 1819 aa18.25■□□□□ 0.51
PRPF19-206ENST00000541371 MSL1Q68DK7 614 aa18.24■□□□□ 0.51
PRPF19-206ENST00000541371 POLKQ9UBT6 870 aa18.24■□□□□ 0.51
PRPF19-206ENST00000541371 TNNT2P45379 298 aaPredicted RBP18.23■□□□□ 0.51
PRPF19-206ENST00000541371 NKX1-1Q15270 411 aaPredicted RBP18.23■□□□□ 0.51
PRPF19-206ENST00000541371 NLGN2Q8NFZ4 835 aa18.23■□□□□ 0.51
PRPF19-206ENST00000541371 PIGBQ92521 554 aa18.23■□□□□ 0.51
PRPF19-206ENST00000541371 COL24A1Q17RW2 1714 aa18.23■□□□□ 0.51
PRPF19-206ENST00000541371 EIF4G2P78344 907 aaKnown RBP eCLIP18.22■□□□□ 0.51
PRPF19-206ENST00000541371 AK7Q96M32 723 aa18.22■□□□□ 0.51
PRPF19-206ENST00000541371 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.22■□□□□ 0.51
PRPF19-206ENST00000541371 NCAPD2Q15021 1401 aa18.22■□□□□ 0.51
PRPF19-206ENST00000541371 CHD4Q14839 1912 aa18.21■□□□□ 0.51
PRPF19-206ENST00000541371 C5P01031 1676 aa18.2■□□□□ 0.5
PRPF19-206ENST00000541371 IFNL2Q8IZJ0 200 aa18.2■□□□□ 0.5
PRPF19-206ENST00000541371 TMOD3Q9NYL9 352 aa18.2■□□□□ 0.5
PRPF19-206ENST00000541371 PKD1L3Q7Z443 1732 aa18.2■□□□□ 0.5
PRPF19-206ENST00000541371 MAP2P11137 1827 aaKnown RBP18.19■□□□□ 0.5
PRPF19-206ENST00000541371 EIF4A2Q14240 407 aaKnown RBP18.19■□□□□ 0.5
PRPF19-206ENST00000541371 ANKRD26Q9UPS8 1709 aa18.18■□□□□ 0.5
PRPF19-206ENST00000541371 GRIN3BO60391 1043 aa18.18■□□□□ 0.5
PRPF19-206ENST00000541371 HSPA5P11021 654 aaKnown RBP18.18■□□□□ 0.5
PRPF19-206ENST00000541371 PHKG2P15735 406 aa18.18■□□□□ 0.5
PRPF19-206ENST00000541371 PANK3Q9H999 370 aa18.18■□□□□ 0.5
PRPF19-206ENST00000541371 TOGARAM1Q9Y4F4 1720 aa18.18■□□□□ 0.5
PRPF19-206ENST00000541371 ITGB4P16144 1822 aa18.17■□□□□ 0.5
PRPF19-206ENST00000541371 LOC102724428A0A0B4J2F2 783 aa18.17■□□□□ 0.5
PRPF19-206ENST00000541371 PHF14O94880 888 aa18.17■□□□□ 0.5
PRPF19-206ENST00000541371 SIK1P57059 783 aa18.17■□□□□ 0.5
PRPF19-206ENST00000541371 ASAP1Q9ULH1 1129 aa18.16■□□□□ 0.5
PRPF19-206ENST00000541371 CD2APQ9Y5K6 639 aa18.16■□□□□ 0.5
PRPF19-206ENST00000541371 TAF1LQ8IZX4 1826 aa18.15■□□□□ 0.5
PRPF19-206ENST00000541371 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.15■□□□□ 0.5
PRPF19-206ENST00000541371 YBX3P16989 372 aaKnown RBP eCLIP18.15■□□□□ 0.57e-7■□□□□ 11
PRPF19-206ENST00000541371 C4BP0C0L5 1744 aa18.15■□□□□ 0.5
PRPF19-206ENST00000541371 UTRNP46939 3433 aa18.14■□□□□ 0.49
PRPF19-206ENST00000541371 SSFA2P28290 1259 aa18.14■□□□□ 0.49
PRPF19-206ENST00000541371 ATP6V1AP38606 617 aa18.14■□□□□ 0.49
PRPF19-206ENST00000541371 SMIM5Q71RC9 77 aa18.14■□□□□ 0.49
PRPF19-206ENST00000541371 AMIGO3Q86WK7 504 aa18.14■□□□□ 0.49
PRPF19-206ENST00000541371 LINC00116Q8NCU8 138 aa18.14■□□□□ 0.49
PRPF19-206ENST00000541371 CCER1Q8TC90 406 aaPredicted RBP18.14■□□□□ 0.49
PRPF19-206ENST00000541371 C1QTNF8P60827 252 aa18.12■□□□□ 0.49
PRPF19-206ENST00000541371 PLEKHO1Q53GL0 409 aaPredicted RBP18.12■□□□□ 0.49
PRPF19-206ENST00000541371 MORC1Q86VD1 984 aa18.12■□□□□ 0.49
PRPF19-206ENST00000541371 ATG3Q9NT62 314 aa18.12■□□□□ 0.49
PRPF19-206ENST00000541371 IGSF1Q8N6C5 1336 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms