RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 PTPN14Q15678 1187 aa17.91■□□□□ 0.46
HMGA2-210ENST00000541363 SPECC1Q5M775 1068 aa17.91■□□□□ 0.46
HMGA2-210ENST00000541363 SCLT1Q96NL6 688 aa17.91■□□□□ 0.46
HMGA2-210ENST00000541363 RAI14Q9P0K7 980 aa17.91■□□□□ 0.46
HMGA2-210ENST00000541363 NAA15Q9BXJ9 866 aaKnown RBP17.91■□□□□ 0.46
HMGA2-210ENST00000541363 HMOX1P09601 288 aa17.91■□□□□ 0.46
HMGA2-210ENST00000541363 PAFAH1B1P43034 410 aa17.91■□□□□ 0.46
HMGA2-210ENST00000541363 PPP1R1BQ9UD71 204 aaPredicted RBP17.91■□□□□ 0.46
HMGA2-210ENST00000541363 GNAI2P04899 355 aa17.91■□□□□ 0.46
HMGA2-210ENST00000541363 RBM25P49756 843 aaKnown RBP17.91■□□□□ 0.46
HMGA2-210ENST00000541363 CCDC83Q8IWF9 413 aa17.91■□□□□ 0.46
HMGA2-210ENST00000541363 NAP1L3Q99457 506 aaPredicted RBP17.91■□□□□ 0.46
HMGA2-210ENST00000541363 FILIP1Q7Z7B0 1213 aa17.9■□□□□ 0.46
HMGA2-210ENST00000541363 UBAC1Q9BSL1 405 aa17.9■□□□□ 0.46
HMGA2-210ENST00000541363 CGNQ9P2M7 1197 aaKnown RBP17.9■□□□□ 0.46
HMGA2-210ENST00000541363 ATF3P18847 181 aa17.9■□□□□ 0.46
HMGA2-210ENST00000541363 PANK1Q8TE04 598 aa17.9■□□□□ 0.46
HMGA2-210ENST00000541363 USO1O60763 962 aaKnown RBP17.9■□□□□ 0.46
HMGA2-210ENST00000541363 SEPT6Q14141 434 aa17.9■□□□□ 0.46
HMGA2-210ENST00000541363 KIF18AQ8NI77 898 aa17.9■□□□□ 0.46
HMGA2-210ENST00000541363 SERPINA10Q9UK55 444 aa17.9■□□□□ 0.46
HMGA2-210ENST00000541363 PDIA4P13667 645 aaKnown RBP17.89■□□□□ 0.45
HMGA2-210ENST00000541363 BRPF3Q9ULD4 1205 aa17.89■□□□□ 0.45
HMGA2-210ENST00000541363 SMG6Q86US8 1419 aaKnown RBP17.89■□□□□ 0.45
HMGA2-210ENST00000541363 VPS8Q8N3P4 1428 aa17.89■□□□□ 0.45
HMGA2-210ENST00000541363 MRPS9P82933 396 aaKnown RBP17.89■□□□□ 0.45
HMGA2-210ENST00000541363 PPP1R14CQ8TAE6 165 aa17.89■□□□□ 0.45
HMGA2-210ENST00000541363 ZSCAN29Q8IWY8 852 aaPredicted RBP17.89■□□□□ 0.45
HMGA2-210ENST00000541363 POTEB2H3BUK9 544 aa17.89■□□□□ 0.45
HMGA2-210ENST00000541363 MPNDQ8N594 471 aa17.89■□□□□ 0.45
HMGA2-210ENST00000541363 USP47Q96K76 1375 aa17.89■□□□□ 0.45
HMGA2-210ENST00000541363 CTR9Q6PD62 1173 aa17.88■□□□□ 0.45
HMGA2-210ENST00000541363 MACROD2A1Z1Q3 448 aa17.88■□□□□ 0.45
HMGA2-210ENST00000541363 USP5P45974 858 aa17.88■□□□□ 0.45
HMGA2-210ENST00000541363 BBXQ8WY36 941 aaPredicted RBP17.88■□□□□ 0.45
HMGA2-210ENST00000541363 GCC1Q96CN9 775 aa17.88■□□□□ 0.45
HMGA2-210ENST00000541363 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.88■□□□□ 0.45
HMGA2-210ENST00000541363 SEC63Q9UGP8 760 aaKnown RBP17.88■□□□□ 0.45
HMGA2-210ENST00000541363 KIF4BQ2VIQ3 1234 aa17.88■□□□□ 0.45
HMGA2-210ENST00000541363 CCDC160A6NGH7 325 aa17.88■□□□□ 0.45
HMGA2-210ENST00000541363 K7ELQ4 463 aaPredicted RBP17.88■□□□□ 0.45
HMGA2-210ENST00000541363 TDO2P48775 406 aa17.87■□□□□ 0.45
HMGA2-210ENST00000541363 DDX46Q7L014 1031 aaKnown RBP17.87■□□□□ 0.45
HMGA2-210ENST00000541363 DDX12PQ92771 950 aa17.87■□□□□ 0.45
HMGA2-210ENST00000541363 IKBKGQ9Y6K9 419 aa17.87■□□□□ 0.45
HMGA2-210ENST00000541363 MAP3K11Q16584 847 aa17.87■□□□□ 0.45
HMGA2-210ENST00000541363 NLRP2Q9NX02 1062 aa17.87■□□□□ 0.45
HMGA2-210ENST00000541363 NOL3O60936 208 aaKnown RBP17.86■□□□□ 0.45
HMGA2-210ENST00000541363 SFPQP23246 707 aaKnown RBP eCLIP17.86■□□□□ 0.454e-8■■□□□ 11.9
HMGA2-210ENST00000541363 FBF1Q8TES7 1133 aa17.86■□□□□ 0.45
HMGA2-210ENST00000541363 LRRC45Q96CN5 670 aa17.86■□□□□ 0.45
HMGA2-210ENST00000541363 CTNNA3Q9UI47 895 aa17.86■□□□□ 0.45
HMGA2-210ENST00000541363 RRBP1Q9P2E9 1410 aaKnown RBP17.86■□□□□ 0.45
HMGA2-210ENST00000541363 LMAN1P49257 510 aa17.86■□□□□ 0.45
HMGA2-210ENST00000541363 HLTFQ14527 1009 aaKnown RBP eCLIP17.85■□□□□ 0.455e-7■□□□□ 8
HMGA2-210ENST00000541363 CBX1P83916 185 aa17.85■□□□□ 0.45
HMGA2-210ENST00000541363 ALS2CR12Q96Q35 445 aa17.85■□□□□ 0.45
HMGA2-210ENST00000541363 PRKRIP1Q9H875 184 aaPredicted RBP17.85■□□□□ 0.45
HMGA2-210ENST00000541363 BLOC1S2Q6QNY1 142 aa17.85■□□□□ 0.45
HMGA2-210ENST00000541363 SMARCC1Q92922 1105 aaPredicted RBP17.84■□□□□ 0.45
HMGA2-210ENST00000541363 ZSCAN31Q96LW9 406 aaPredicted RBP17.84■□□□□ 0.45
HMGA2-210ENST00000541363 SF3B2Q13435 895 aaKnown RBP17.84■□□□□ 0.45
HMGA2-210ENST00000541363 MPHOSPH8Q99549 860 aa17.84■□□□□ 0.45
HMGA2-210ENST00000541363 PDRG1Q9NUG6 133 aa17.84■□□□□ 0.45
HMGA2-210ENST00000541363 PIBF1Q8WXW3 757 aa17.84■□□□□ 0.45
HMGA2-210ENST00000541363 ZNF287Q9HBT7 754 aa17.84■□□□□ 0.45
HMGA2-210ENST00000541363 CCDC6Q16204 474 aa17.83■□□□□ 0.45
HMGA2-210ENST00000541363 SRCIN1Q9C0H9 1055 aa17.83■□□□□ 0.45
HMGA2-210ENST00000541363 A0A1W2PRG0 241 aa17.83■□□□□ 0.45
HMGA2-210ENST00000541363 URI1O94763 535 aaPredicted RBP17.83■□□□□ 0.45
HMGA2-210ENST00000541363 KRT32Q14532 448 aa17.83■□□□□ 0.45
HMGA2-210ENST00000541363 CEP112Q8N8E3 955 aa17.83■□□□□ 0.45
HMGA2-210ENST00000541363 RBM42Q9BTD8 480 aaKnown RBP17.83■□□□□ 0.45
HMGA2-210ENST00000541363 GAS2L2Q8NHY3 880 aa17.83■□□□□ 0.44
HMGA2-210ENST00000541363 PPP6R1Q9UPN7 881 aa17.83■□□□□ 0.44
HMGA2-210ENST00000541363 NUP88Q99567 741 aaPredicted RBP17.83■□□□□ 0.44
HMGA2-210ENST00000541363 ANAPC4Q9UJX5 808 aa17.82■□□□□ 0.44
HMGA2-210ENST00000541363 MXRA7P84157 204 aa17.82■□□□□ 0.44
HMGA2-210ENST00000541363 TOP1P11387 765 aaKnown RBP17.82■□□□□ 0.44
HMGA2-210ENST00000541363 FKBP4Q02790 459 aaKnown RBP eCLIP17.82■□□□□ 0.443e-6■■□□□ 13
HMGA2-210ENST00000541363 APBB1IPQ7Z5R6 666 aaPredicted RBP17.82■□□□□ 0.44
HMGA2-210ENST00000541363 HSPA4P34932 840 aa17.82■□□□□ 0.44
HMGA2-210ENST00000541363 UBA5Q9GZZ9 404 aa17.82■□□□□ 0.44
HMGA2-210ENST00000541363 CETN1Q12798 172 aa17.81■□□□□ 0.44
HMGA2-210ENST00000541363 MAATS1Q7Z4T9 603 aa17.81■□□□□ 0.44
HMGA2-210ENST00000541363 SLU7O95391 586 aaKnown RBP17.81■□□□□ 0.44
HMGA2-210ENST00000541363 NSRP1Q9H0G5 558 aaKnown RBP17.81■□□□□ 0.44
HMGA2-210ENST00000541363 WDHD1O75717 1129 aaPredicted RBP17.81■□□□□ 0.44
HMGA2-210ENST00000541363 DNA2P51530 1060 aa17.81■□□□□ 0.44
HMGA2-210ENST00000541363 TNNT1P13805 278 aa17.8■□□□□ 0.44
HMGA2-210ENST00000541363 MNAT1P51948 309 aa17.8■□□□□ 0.44
HMGA2-210ENST00000541363 RAB34Q9BZG1 259 aa17.8■□□□□ 0.44
HMGA2-210ENST00000541363 PRDM10Q9NQV6 1147 aa17.8■□□□□ 0.44
HMGA2-210ENST00000541363 PLEKHO1Q53GL0 409 aaPredicted RBP17.8■□□□□ 0.44
HMGA2-210ENST00000541363 AEBP2Q6ZN18 517 aaPredicted RBP17.8■□□□□ 0.44
HMGA2-210ENST00000541363 DNAAF4Q8WXU2 420 aa17.8■□□□□ 0.44
HMGA2-210ENST00000541363 MAP4K4O95819 1239 aaPredicted RBP17.8■□□□□ 0.44
HMGA2-210ENST00000541363 CHMP4BP1P59074 171 aa17.8■□□□□ 0.44
HMGA2-210ENST00000541363 WDR66Q8TBY9 1149 aa17.8■□□□□ 0.44
HMGA2-210ENST00000541363 CCDC155Q8N6L0 562 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms