RNA–Protein interactions for RNA: ENST00000541354.5

SPOCK3-226, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2 BASIC

Gene SPOCK3, Length 2,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-226ENST00000541354 CANXP27824 592 aaKnown RBP18.73■□□□□ 0.59
SPOCK3-226ENST00000541354 SPATA31A3Q5VYP0 1347 aa18.72■□□□□ 0.59
SPOCK3-226ENST00000541354 FAM161AQ3B820 660 aa18.71■□□□□ 0.59
SPOCK3-226ENST00000541354 CHMP4BQ9H444 224 aaKnown RBP18.71■□□□□ 0.59
SPOCK3-226ENST00000541354 MAP3K5Q99683 1374 aa18.71■□□□□ 0.59
SPOCK3-226ENST00000541354 MBIPQ9NS73 344 aa18.71■□□□□ 0.59
SPOCK3-226ENST00000541354 RTF1Q92541 710 aaKnown RBP18.7■□□□□ 0.58
SPOCK3-226ENST00000541354 CLUAP1Q96AJ1 413 aa18.7■□□□□ 0.58
SPOCK3-226ENST00000541354 ADAMTS7Q9UKP4 1686 aa18.7■□□□□ 0.58
SPOCK3-226ENST00000541354 DDRGK1Q96HY6 314 aa18.7■□□□□ 0.58
SPOCK3-226ENST00000541354 VAMP4O75379 141 aa18.7■□□□□ 0.58
SPOCK3-226ENST00000541354 MTHFSDQ2M296 383 aaKnown RBP18.7■□□□□ 0.58
SPOCK3-226ENST00000541354 NUTM2GQ5VZR2 741 aa18.7■□□□□ 0.58
SPOCK3-226ENST00000541354 SMC4Q9NTJ3 1288 aa18.7■□□□□ 0.58
SPOCK3-226ENST00000541354 C8orf34Q49A92 452 aa18.69■□□□□ 0.58
SPOCK3-226ENST00000541354 AMOTQ4VCS5 1084 aa18.69■□□□□ 0.58
SPOCK3-226ENST00000541354 SOS2Q07890 1332 aaPredicted RBP18.69■□□□□ 0.58
SPOCK3-226ENST00000541354 SOX12O15370 315 aa18.69■□□□□ 0.58
SPOCK3-226ENST00000541354 SSH1Q8WYL5 1049 aa18.69■□□□□ 0.58
SPOCK3-226ENST00000541354 VIRMAQ69YN4 1812 aaKnown RBP18.68■□□□□ 0.58
SPOCK3-226ENST00000541354 GNAT3A8MTJ3 354 aa18.68■□□□□ 0.58
SPOCK3-226ENST00000541354 ATF7IPQ6VMQ6 1270 aa18.68■□□□□ 0.58
SPOCK3-226ENST00000541354 SKAP1Q86WV1 359 aa18.67■□□□□ 0.58
SPOCK3-226ENST00000541354 DZIP1LQ8IYY4 767 aaKnown RBP18.67■□□□□ 0.58
SPOCK3-226ENST00000541354 BRINP3Q76B58 766 aa18.67■□□□□ 0.58
SPOCK3-226ENST00000541354 CHMP4AQ9BY43 222 aa18.67■□□□□ 0.58
SPOCK3-226ENST00000541354 MVPQ14764 893 aaKnown RBP18.66■□□□□ 0.58
SPOCK3-226ENST00000541354 ABCA3Q99758 1704 aa18.66■□□□□ 0.58
SPOCK3-226ENST00000541354 CEMIPQ8WUJ3 1361 aa18.66■□□□□ 0.58
SPOCK3-226ENST00000541354 IGHDP01880 384 aa18.66■□□□□ 0.58
SPOCK3-226ENST00000541354 RGPD2P0DJD1 1756 aa18.66■□□□□ 0.58
SPOCK3-226ENST00000541354 ZNF335Q9H4Z2 1342 aaPredicted RBP18.65■□□□□ 0.58
SPOCK3-226ENST00000541354 TWISTNBQ3B726 338 aaPredicted RBP18.65■□□□□ 0.58
SPOCK3-226ENST00000541354 SLAIN2Q9P270 581 aa18.65■□□□□ 0.58
SPOCK3-226ENST00000541354 DDX19BQ9UMR2 479 aa18.65■□□□□ 0.58
SPOCK3-226ENST00000541354 CACNA1FO60840 1977 aa18.65■□□□□ 0.58
SPOCK3-226ENST00000541354 MRPL50Q8N5N7 158 aaKnown RBP18.64■□□□□ 0.58
SPOCK3-226ENST00000541354 PLEKHO1Q53GL0 409 aaPredicted RBP18.64■□□□□ 0.57
SPOCK3-226ENST00000541354 PANK1Q8TE04 598 aa18.64■□□□□ 0.57
SPOCK3-226ENST00000541354 NPM2Q86SE8 214 aaKnown RBP18.63■□□□□ 0.57
SPOCK3-226ENST00000541354 ANKRD24Q8TF21 1146 aa18.63■□□□□ 0.57
SPOCK3-226ENST00000541354 FRAT1Q92837 279 aaPredicted RBP18.63■□□□□ 0.57
SPOCK3-226ENST00000541354 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.63■□□□□ 0.57
SPOCK3-226ENST00000541354 COG6Q9Y2V7 657 aa18.63■□□□□ 0.57
SPOCK3-226ENST00000541354 KDM3BQ7LBC6 1761 aa18.63■□□□□ 0.57
SPOCK3-226ENST00000541354 RGPD5Q99666 1765 aa18.62■□□□□ 0.57
SPOCK3-226ENST00000541354 ERBB3P21860 1342 aa18.62■□□□□ 0.57
SPOCK3-226ENST00000541354 NBPF6Q5VWK0 638 aa18.62■□□□□ 0.57
SPOCK3-226ENST00000541354 FTSJ3Q8IY81 847 aaKnown RBP18.62■□□□□ 0.57
SPOCK3-226ENST00000541354 NBPF4Q96M43 638 aa18.62■□□□□ 0.57
SPOCK3-226ENST00000541354 API5Q9BZZ5 524 aaKnown RBP18.62■□□□□ 0.57
SPOCK3-226ENST00000541354 FAM83GA6ND36 823 aa18.62■□□□□ 0.57
SPOCK3-226ENST00000541354 AKAP4Q5JQC9 854 aa18.62■□□□□ 0.57
SPOCK3-226ENST00000541354 THUMPD2Q9BTF0 503 aaKnown RBP18.62■□□□□ 0.57
SPOCK3-226ENST00000541354 AHDC1Q5TGY3 1603 aaPredicted RBP18.62■□□□□ 0.57
SPOCK3-226ENST00000541354 TRIM27P14373 513 aa18.61■□□□□ 0.57
SPOCK3-226ENST00000541354 PKD1L3Q7Z443 1732 aa18.61■□□□□ 0.57
SPOCK3-226ENST00000541354 LAS1LQ9Y4W2 734 aaKnown RBP18.61■□□□□ 0.57
SPOCK3-226ENST00000541354 NOB1Q9ULX3 412 aaKnown RBP18.6■□□□□ 0.57
SPOCK3-226ENST00000541354 PTPRCP08575 1304 aa18.6■□□□□ 0.57
SPOCK3-226ENST00000541354 COL22A1Q8NFW1 1626 aaPredicted RBP18.59■□□□□ 0.57
SPOCK3-226ENST00000541354 RLBP1P12271 317 aa18.59■□□□□ 0.57
SPOCK3-226ENST00000541354 XPCQ01831 940 aaPredicted RBP18.59■□□□□ 0.57
SPOCK3-226ENST00000541354 ABCC4O15439 1325 aa18.59■□□□□ 0.57
SPOCK3-226ENST00000541354 SIPA1L3O60292 1781 aaPredicted RBP18.59■□□□□ 0.57
SPOCK3-226ENST00000541354 HOXB7P09629 217 aa18.59■□□□□ 0.57
SPOCK3-226ENST00000541354 MCM10Q7L590 875 aa18.59■□□□□ 0.57
SPOCK3-226ENST00000541354 USP35Q9P2H5 1018 aa18.59■□□□□ 0.57
SPOCK3-226ENST00000541354 TAF7Q15545 349 aaPredicted RBP18.59■□□□□ 0.57
SPOCK3-226ENST00000541354 LTBP4Q8N2S1 1624 aa18.58■□□□□ 0.57
SPOCK3-226ENST00000541354 C8orf58Q8NAV2 365 aa18.58■□□□□ 0.56
SPOCK3-226ENST00000541354 PARP4Q9UKK3 1724 aaKnown RBP18.58■□□□□ 0.56
SPOCK3-226ENST00000541354 N4BP2Q86UW6 1770 aaPredicted RBP18.58■□□□□ 0.56
SPOCK3-226ENST00000541354 DCTN1Q14203 1278 aa18.57■□□□□ 0.56
SPOCK3-226ENST00000541354 LMOD2Q6P5Q4 547 aa18.57■□□□□ 0.56
SPOCK3-226ENST00000541354 LTV1Q96GA3 475 aaPredicted RBP18.56■□□□□ 0.56
SPOCK3-226ENST00000541354 TSPYL4Q9UJ04 414 aa18.56■□□□□ 0.56
SPOCK3-226ENST00000541354 PCDHB15Q9Y5E8 787 aa18.56■□□□□ 0.56
SPOCK3-226ENST00000541354 TSPYL6Q8N831 410 aa18.56■□□□□ 0.56
SPOCK3-226ENST00000541354 BCL2L13Q9BXK5 485 aa18.56■□□□□ 0.56
SPOCK3-226ENST00000541354 RWDD1Q9H446 243 aaPredicted RBP18.55■□□□□ 0.56
SPOCK3-226ENST00000541354 RGS3P49796 1198 aa18.55■□□□□ 0.56
SPOCK3-226ENST00000541354 HDAC1Q13547 482 aaPredicted RBP18.55■□□□□ 0.56
SPOCK3-226ENST00000541354 IL17REQ8NFR9 667 aa18.55■□□□□ 0.56
SPOCK3-226ENST00000541354 SCN11AQ9UI33 1791 aa18.54■□□□□ 0.56
SPOCK3-226ENST00000541354 MRC1P22897 1456 aa18.54■□□□□ 0.56
SPOCK3-226ENST00000541354 AXIN2Q9Y2T1 843 aa18.53■□□□□ 0.56
SPOCK3-226ENST00000541354 TNNQ9UQP3 1299 aa18.53■□□□□ 0.56
SPOCK3-226ENST00000541354 PXDNLA1KZ92 1463 aa18.52■□□□□ 0.56
SPOCK3-226ENST00000541354 C1orf141Q5JVX7 400 aa18.52■□□□□ 0.56
SPOCK3-226ENST00000541354 ZBTB40Q9NUA8 1239 aa18.52■□□□□ 0.56
SPOCK3-226ENST00000541354 NBR1Q14596 966 aa18.52■□□□□ 0.55
SPOCK3-226ENST00000541354 INTS3Q68E01 1043 aaKnown RBP18.51■□□□□ 0.55
SPOCK3-226ENST00000541354 ZNF530Q6P9A1 599 aaPredicted RBP18.51■□□□□ 0.55
SPOCK3-226ENST00000541354 SPG7Q9UQ90 795 aa18.51■□□□□ 0.55
SPOCK3-226ENST00000541354 DEKP35659 375 aaKnown RBP18.5■□□□□ 0.55
SPOCK3-226ENST00000541354 TMEM57Q8N5G2 664 aa18.5■□□□□ 0.55
SPOCK3-226ENST00000541354 LRRC59Q96AG4 307 aaKnown RBP18.5■□□□□ 0.55
SPOCK3-226ENST00000541354 RGS12O14924 1447 aa18.5■□□□□ 0.55
SPOCK3-226ENST00000541354 TATP17735 454 aaPredicted RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms