RNA–Protein interactions for RNA: ENST00000541340.5

PPME1-206, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 3,618 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-206ENST00000541340 FOXD4L4Q8WXT5 416 aaPredicted RBP8.9□□□□□ -0.98
PPME1-206ENST00000541340 KIF2CQ99661 725 aa8.9□□□□□ -0.98
PPME1-206ENST00000541340 FYCO1Q9BQS8 1478 aa8.9□□□□□ -0.98
PPME1-206ENST00000541340 MAP2K2P36507 400 aa8.9□□□□□ -0.98
PPME1-206ENST00000541340 CASC1Q6TDU7 716 aa8.9□□□□□ -0.98
PPME1-206ENST00000541340 LRSAM1Q6UWE0 723 aa8.9□□□□□ -0.98
PPME1-206ENST00000541340 TMEM63CQ9P1W3 806 aa8.9□□□□□ -0.98
PPME1-206ENST00000541340 CCDC191Q8NCU4 936 aa8.9□□□□□ -0.99
PPME1-206ENST00000541340 CALRP27797 417 aaKnown RBP8.89□□□□□ -0.99
PPME1-206ENST00000541340 CCDC96Q2M329 555 aa8.89□□□□□ -0.99
PPME1-206ENST00000541340 TRDNQ13061 729 aa8.89□□□□□ -0.99
PPME1-206ENST00000541340 TXLNBQ8N3L3 684 aa8.89□□□□□ -0.99
PPME1-206ENST00000541340 ANKRD20A12PQ8NF67 263 aa8.89□□□□□ -0.99
PPME1-206ENST00000541340 CASKIN1Q8WXD9 1431 aa8.89□□□□□ -0.99
PPME1-206ENST00000541340 MBD5Q9P267 1494 aa8.89□□□□□ -0.99
PPME1-206ENST00000541340 PRPF40AO75400 957 aaKnown RBP8.88□□□□□ -0.99
PPME1-206ENST00000541340 MTA1Q13330 715 aa8.88□□□□□ -0.99
PPME1-206ENST00000541340 WDR43Q15061 677 aaKnown RBP eCLIP8.88□□□□□ -0.99
PPME1-206ENST00000541340 LMBRD1Q9NUN5 540 aa8.88□□□□□ -0.99
PPME1-206ENST00000541340 RRP15Q9Y3B9 282 aaKnown RBP8.88□□□□□ -0.99
PPME1-206ENST00000541340 CCT2P78371 535 aaKnown RBP8.88□□□□□ -0.99
PPME1-206ENST00000541340 MCTP2Q6DN12 878 aa8.88□□□□□ -0.99
PPME1-206ENST00000541340 SUGP1Q8IWZ8 645 aaKnown RBP8.88□□□□□ -0.99
PPME1-206ENST00000541340 ZNF397Q8NF99 534 aaPredicted RBP8.88□□□□□ -0.99
PPME1-206ENST00000541340 KNSTRNQ9Y448 316 aa8.88□□□□□ -0.99
PPME1-206ENST00000541340 CGNL1Q0VF96 1302 aa8.88□□□□□ -0.99
PPME1-206ENST00000541340 PLEKHG2Q9H7P9 1386 aa8.88□□□□□ -0.99
PPME1-206ENST00000541340 ZNF644Q9H582 1327 aaPredicted RBP8.88□□□□□ -0.99
PPME1-206ENST00000541340 H0YHG0 523 aa8.88□□□□□ -0.99
PPME1-206ENST00000541340 SARNPP82979 210 aaKnown RBP8.88□□□□□ -0.99
PPME1-206ENST00000541340 FAM184AQ8NB25 1140 aa8.88□□□□□ -0.99
PPME1-206ENST00000541340 PIK3R5Q8WYR1 880 aa8.88□□□□□ -0.99
PPME1-206ENST00000541340 NBPF3Q9H094 633 aa8.88□□□□□ -0.99
PPME1-206ENST00000541340 NEUROD2Q15784 382 aa8.87□□□□□ -0.99
PPME1-206ENST00000541340 ZSCAN26Q16670 478 aa8.87□□□□□ -0.99
PPME1-206ENST00000541340 ANKRD23Q86SG2 305 aa8.87□□□□□ -0.99
PPME1-206ENST00000541340 TRMT2AQ8IZ69 625 aaKnown RBP8.87□□□□□ -0.99
PPME1-206ENST00000541340 KIAA1524Q8TCG1 905 aa8.87□□□□□ -0.99
PPME1-206ENST00000541340 SNX21Q969T3 373 aa8.87□□□□□ -0.99
PPME1-206ENST00000541340 ZMYM3Q14202 1370 aa8.87□□□□□ -0.99
PPME1-206ENST00000541340 C1QTNF12Q5T7M4 302 aa8.87□□□□□ -0.99
PPME1-206ENST00000541340 TBC1D22AQ8WUA7 517 aa8.87□□□□□ -0.99
PPME1-206ENST00000541340 LIG1P18858 919 aa8.86□□□□□ -0.99
PPME1-206ENST00000541340 FAM210AQ96ND0 272 aa8.86□□□□□ -0.99
PPME1-206ENST00000541340 LRRFIP2Q9Y608 721 aaKnown RBP8.86□□□□□ -0.99
PPME1-206ENST00000541340 TTC19Q6DKK2 380 aaPredicted RBP8.86□□□□□ -0.99
PPME1-206ENST00000541340 MORC1Q86VD1 984 aa8.86□□□□□ -0.99
PPME1-206ENST00000541340 NKTRP30414 1462 aaKnown RBP8.86□□□□□ -0.99
PPME1-206ENST00000541340 GCC2Q8IWJ2 1684 aa8.86□□□□□ -0.99
PPME1-206ENST00000541340 E9PCH4 1651 aa8.86□□□□□ -0.99
PPME1-206ENST00000541340 CCDC196A0A1B0GTZ2 297 aa8.86□□□□□ -0.99
PPME1-206ENST00000541340 DISP3Q9P2K9 1392 aa8.85□□□□□ -0.99
PPME1-206ENST00000541340 SCP2P22307 547 aa8.85□□□□□ -0.99
PPME1-206ENST00000541340 MAGEA9P43362 315 aa8.85□□□□□ -0.99
PPME1-206ENST00000541340 PKD2Q13563 968 aa8.85□□□□□ -0.99
PPME1-206ENST00000541340 FOXD4L6Q3SYB3 417 aaPredicted RBP8.85□□□□□ -0.99
PPME1-206ENST00000541340 FOXD4L3Q6VB84 417 aaPredicted RBP8.85□□□□□ -0.99
PPME1-206ENST00000541340 CEP89Q96ST8 783 aa8.85□□□□□ -0.99
PPME1-206ENST00000541340 ANKRD33BA6NCL7 494 aa8.85□□□□□ -0.99
PPME1-206ENST00000541340 CTAGE5O15320 804 aa8.85□□□□□ -0.99
PPME1-206ENST00000541340 FBXO38Q6PIJ6 1188 aa8.85□□□□□ -0.99
PPME1-206ENST00000541340 CWC15Q9P013 229 aaKnown RBP8.85□□□□□ -0.99
PPME1-206ENST00000541340 RRP7AQ9Y3A4 280 aaKnown RBP8.85□□□□□ -0.99
PPME1-206ENST00000541340 PAXBP1Q9Y5B6 917 aa8.85□□□□□ -0.99
PPME1-206ENST00000541340 MAGI3Q5TCQ9 1506 aa8.85□□□□□ -0.99
PPME1-206ENST00000541340 SMTNL1A8MU46 457 aa8.85□□□□□ -0.99
PPME1-206ENST00000541340 COQ9O75208 318 aa8.85□□□□□ -0.99
PPME1-206ENST00000541340 NOM1Q5C9Z4 860 aaKnown RBP8.85□□□□□ -0.99
PPME1-206ENST00000541340 GTF3C6Q969F1 213 aa8.85□□□□□ -0.99
PPME1-206ENST00000541340 PYCARDQ9ULZ3 195 aa8.85□□□□□ -0.99
PPME1-206ENST00000541340 UHRF1BP1LA0JNW5 1464 aa8.84□□□□□ -0.99
PPME1-206ENST00000541340 POLA1P09884 1462 aaPredicted RBP8.84□□□□□ -0.99
PPME1-206ENST00000541340 CAND2O75155 1236 aa8.84□□□□□ -0.99
PPME1-206ENST00000541340 IPO7O95373 1038 aaKnown RBP8.84□□□□□ -0.99
PPME1-206ENST00000541340 PPP2R1AP30153 589 aa8.84□□□□□ -0.99
PPME1-206ENST00000541340 PDE3AQ14432 1141 aa8.84□□□□□ -0.99
PPME1-206ENST00000541340 ARMCX6Q7L4S7 300 aa8.84□□□□□ -0.99
PPME1-206ENST00000541340 K7ELQ4 463 aaPredicted RBP8.84□□□□□ -0.99
PPME1-206ENST00000541340 ZGPATQ8N5A5 531 aaKnown RBP8.84□□□□□ -0.99
PPME1-206ENST00000541340 FAXDC2Q96IV6 333 aa8.84□□□□□ -0.99
PPME1-206ENST00000541340 USP25Q9UHP3 1055 aa8.84□□□□□ -0.99
PPME1-206ENST00000541340 GRIN2BQ13224 1484 aa8.84□□□□□ -0.99
PPME1-206ENST00000541340 TMTC2Q8N394 836 aa8.84□□□□□ -1
PPME1-206ENST00000541340 KANK1Q14678 1352 aa8.84□□□□□ -1
PPME1-206ENST00000541340 PLEKHH2Q8IVE3 1493 aa8.83□□□□□ -1
PPME1-206ENST00000541340 ST5P78524 1137 aa8.83□□□□□ -1
PPME1-206ENST00000541340 NAIF1Q69YI7 327 aaPredicted RBP8.83□□□□□ -1
PPME1-206ENST00000541340 NUCKS1Q9H1E3 243 aaKnown RBP8.83□□□□□ -1
PPME1-206ENST00000541340 PTPRCP08575 1304 aa8.83□□□□□ -1
PPME1-206ENST00000541340 PMFBP1Q8TBY8 1022 aa8.83□□□□□ -1
PPME1-206ENST00000541340 SMARCE1Q969G3 411 aa8.83□□□□□ -1
PPME1-206ENST00000541340 SPAG9O60271 1321 aaKnown RBP8.83□□□□□ -1
PPME1-206ENST00000541340 KIF14Q15058 1648 aa8.83□□□□□ -1
PPME1-206ENST00000541340 TEX35Q5T0J7 233 aa8.82□□□□□ -1
PPME1-206ENST00000541340 MMS22LQ6ZRQ5 1243 aa8.82□□□□□ -1
PPME1-206ENST00000541340 PRPF38AQ8NAV1 312 aaKnown RBP8.82□□□□□ -1
PPME1-206ENST00000541340 LNPKQ9C0E8 428 aa8.82□□□□□ -1
PPME1-206ENST00000541340 KCNF1Q9H3M0 494 aa8.82□□□□□ -1
PPME1-206ENST00000541340 PAX7P23759 505 aa8.82□□□□□ -1
PPME1-206ENST00000541340 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms