RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 RGPD2P0DJD1 1756 aa33.5■■■□□ 2.95
LEMD3-203ENST00000541171 KCNQ4P56696 695 aa33.5■■■□□ 2.95
LEMD3-203ENST00000541171 MEGF6O75095 1541 aa33.49■■■□□ 2.95
LEMD3-203ENST00000541171 CDCA8Q53HL2 280 aa33.49■■■□□ 2.95
LEMD3-203ENST00000541171 SLC27A3Q5K4L6 730 aa33.49■■■□□ 2.95
LEMD3-203ENST00000541171 AKT1S1Q96B36 256 aa33.48■■■□□ 2.95
LEMD3-203ENST00000541171 ARXQ96QS3 562 aa33.47■■■□□ 2.95
LEMD3-203ENST00000541171 RAPGEF4Q8WZA2 1011 aa33.45■■■□□ 2.95
LEMD3-203ENST00000541171 SMG6Q86US8 1419 aaKnown RBP33.45■■■□□ 2.94
LEMD3-203ENST00000541171 HSP90AB2PQ58FF8 381 aa33.44■■■□□ 2.94
LEMD3-203ENST00000541171 DOT1LQ8TEK3 1739 aa33.42■■■□□ 2.94
LEMD3-203ENST00000541171 TFCP2L1Q9NZI6 479 aa33.42■■■□□ 2.94
LEMD3-203ENST00000541171 TATP17735 454 aaPredicted RBP33.41■■■□□ 2.94
LEMD3-203ENST00000541171 NSD2O96028 1365 aa33.41■■■□□ 2.94
LEMD3-203ENST00000541171 CARD14Q9BXL6 1004 aa33.4■■■□□ 2.94
LEMD3-203ENST00000541171 SHANK3Q9BYB0 1731 aa33.39■■■□□ 2.94
LEMD3-203ENST00000541171 PNPLA7Q6ZV29 1317 aa33.39■■■□□ 2.94
LEMD3-203ENST00000541171 INSRP06213 1382 aa33.38■■■□□ 2.93
LEMD3-203ENST00000541171 CGNL1Q0VF96 1302 aa33.38■■■□□ 2.93
LEMD3-203ENST00000541171 CCNL1Q9UK58 526 aaPredicted RBP33.38■■■□□ 2.93
LEMD3-203ENST00000541171 KLHL34Q8N239 644 aa33.37■■■□□ 2.93
LEMD3-203ENST00000541171 SLC16A10Q8TF71 515 aa33.37■■■□□ 2.93
LEMD3-203ENST00000541171 FLT4P35916 1363 aa33.36■■■□□ 2.93
LEMD3-203ENST00000541171 KIF20BQ96Q89 1820 aa33.35■■■□□ 2.93
LEMD3-203ENST00000541171 NSD3Q9BZ95 1437 aa33.35■■■□□ 2.93
LEMD3-203ENST00000541171 POLD1P28340 1107 aa33.34■■■□□ 2.93
LEMD3-203ENST00000541171 EMILIN1Q9Y6C2 1016 aa33.34■■■□□ 2.93
LEMD3-203ENST00000541171 PPM1GO15355 546 aaPredicted RBP33.32■■■□□ 2.92
LEMD3-203ENST00000541171 MSH5O43196 834 aa33.31■■■□□ 2.92
LEMD3-203ENST00000541171 PCGF6Q9BYE7 350 aa33.31■■■□□ 2.92
LEMD3-203ENST00000541171 PCDH11XQ9BZA7 1347 aa33.3■■■□□ 2.92
LEMD3-203ENST00000541171 PCDH11YQ9BZA8 1340 aa33.3■■■□□ 2.92
LEMD3-203ENST00000541171 KIF24Q5T7B8 1368 aa33.3■■■□□ 2.92
LEMD3-203ENST00000541171 LY75O60449 1722 aa33.3■■■□□ 2.92
LEMD3-203ENST00000541171 POLR3GLQ9BT43 218 aa33.29■■■□□ 2.92
LEMD3-203ENST00000541171 TIMELESSQ9UNS1 1208 aa33.29■■■□□ 2.92
LEMD3-203ENST00000541171 MAP3K5Q99683 1374 aa33.28■■■□□ 2.92
LEMD3-203ENST00000541171 QSER1Q2KHR3 1735 aa33.27■■■□□ 2.92
LEMD3-203ENST00000541171 MPRIPQ6WCQ1 1025 aa33.26■■■□□ 2.91
LEMD3-203ENST00000541171 TUBGCP6Q96RT7 1819 aa33.25■■■□□ 2.91
LEMD3-203ENST00000541171 CYP27B1O15528 508 aa33.25■■■□□ 2.91
LEMD3-203ENST00000541171 GPR162Q16538 588 aa33.25■■■□□ 2.91
LEMD3-203ENST00000541171 COL23A1Q86Y22 540 aaPredicted RBP33.23■■■□□ 2.91
LEMD3-203ENST00000541171 ZNF784Q8NCA9 323 aaPredicted RBP33.23■■■□□ 2.91
LEMD3-203ENST00000541171 PELP1Q8IZL8 1130 aaKnown RBP33.22■■■□□ 2.91
LEMD3-203ENST00000541171 PALLDQ8WX93 1383 aa33.2■■■□□ 2.9
LEMD3-203ENST00000541171 UTRNP46939 3433 aa33.18■■■□□ 2.9
LEMD3-203ENST00000541171 MSL1Q68DK7 614 aa33.17■■■□□ 2.9
LEMD3-203ENST00000541171 NLGN2Q8NFZ4 835 aa33.17■■■□□ 2.9
LEMD3-203ENST00000541171 WASHC2AQ641Q2 1341 aa33.17■■■□□ 2.9
LEMD3-203ENST00000541171 EYA1Q99502 592 aa33.16■■■□□ 2.9
LEMD3-203ENST00000541171 SPG7Q9UQ90 795 aa33.16■■■□□ 2.9
LEMD3-203ENST00000541171 TNNT2P45379 298 aaPredicted RBP33.15■■■□□ 2.9
LEMD3-203ENST00000541171 COL24A1Q17RW2 1714 aa33.15■■■□□ 2.9
LEMD3-203ENST00000541171 CLSPNQ9HAW4 1339 aa33.15■■■□□ 2.9
LEMD3-203ENST00000541171 POLKQ9UBT6 870 aa33.14■■■□□ 2.9
LEMD3-203ENST00000541171 SMARCC1Q92922 1105 aaPredicted RBP33.13■■■□□ 2.89
LEMD3-203ENST00000541171 PIGBQ92521 554 aa33.12■■■□□ 2.89
LEMD3-203ENST00000541171 CHD4Q14839 1912 aa33.11■■■□□ 2.89
LEMD3-203ENST00000541171 NCAPD2Q15021 1401 aa33.11■■■□□ 2.89
LEMD3-203ENST00000541171 C5P01031 1676 aa33.1■■■□□ 2.89
LEMD3-203ENST00000541171 HMGB2P26583 209 aaKnown RBP33.1■■■□□ 2.89
LEMD3-203ENST00000541171 TOGARAM1Q9Y4F4 1720 aa33.1■■■□□ 2.89
LEMD3-203ENST00000541171 MAP2P11137 1827 aaKnown RBP33.09■■■□□ 2.89
LEMD3-203ENST00000541171 PKD1L3Q7Z443 1732 aa33.09■■■□□ 2.89
LEMD3-203ENST00000541171 NKX1-1Q15270 411 aaPredicted RBP33.09■■■□□ 2.89
LEMD3-203ENST00000541171 FLAD1Q8NFF5 587 aa33.09■■■□□ 2.89
LEMD3-203ENST00000541171 AK7Q96M32 723 aa33.08■■■□□ 2.89
LEMD3-203ENST00000541171 ITGB4P16144 1822 aa33.07■■■□□ 2.88
LEMD3-203ENST00000541171 ANKRD26Q9UPS8 1709 aa33.06■■■□□ 2.88
LEMD3-203ENST00000541171 EIF4G2P78344 907 aaKnown RBP eCLIP33.06■■■□□ 2.882e-7■■■■■ 37.6
LEMD3-203ENST00000541171 HSPA5P11021 654 aaKnown RBP33.05■■■□□ 2.88
LEMD3-203ENST00000541171 EIF4A2Q14240 407 aaKnown RBP33.05■■■□□ 2.88
LEMD3-203ENST00000541171 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.05■■■□□ 2.88
LEMD3-203ENST00000541171 PHF14O94880 888 aa33.04■■■□□ 2.88
LEMD3-203ENST00000541171 SMIM5Q71RC9 77 aa33.04■■■□□ 2.88
LEMD3-203ENST00000541171 IFNL2Q8IZJ0 200 aa33.04■■■□□ 2.88
LEMD3-203ENST00000541171 TMOD3Q9NYL9 352 aa33.04■■■□□ 2.88
LEMD3-203ENST00000541171 PANK3Q9H999 370 aa33.03■■■□□ 2.88
LEMD3-203ENST00000541171 TAF1LQ8IZX4 1826 aa33.02■■■□□ 2.88
LEMD3-203ENST00000541171 PHKG2P15735 406 aa33.02■■■□□ 2.88
LEMD3-203ENST00000541171 AMIGO3Q86WK7 504 aa33.02■■■□□ 2.88
LEMD3-203ENST00000541171 LOC102724428A0A0B4J2F2 783 aa33.01■■■□□ 2.87
LEMD3-203ENST00000541171 SIK1P57059 783 aa33.01■■■□□ 2.87
LEMD3-203ENST00000541171 C4BP0C0L5 1744 aa33■■■□□ 2.87
LEMD3-203ENST00000541171 YBX3P16989 372 aaKnown RBP eCLIP33■■■□□ 2.87
LEMD3-203ENST00000541171 ASAP1Q9ULH1 1129 aa33■■■□□ 2.87
LEMD3-203ENST00000541171 LINC00116Q8NCU8 138 aa32.98■■■□□ 2.87
LEMD3-203ENST00000541171 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP32.97■■■□□ 2.87
LEMD3-203ENST00000541171 GRIN3BO60391 1043 aa32.96■■■□□ 2.87
LEMD3-203ENST00000541171 ATP6V1AP38606 617 aa32.95■■■□□ 2.87
LEMD3-203ENST00000541171 CD2APQ9Y5K6 639 aa32.95■■■□□ 2.87
LEMD3-203ENST00000541171 ITPK1Q13572 414 aa32.94■■■□□ 2.86
LEMD3-203ENST00000541171 CCER1Q8TC90 406 aaPredicted RBP32.94■■■□□ 2.86
LEMD3-203ENST00000541171 ATG3Q9NT62 314 aa32.93■■■□□ 2.86
LEMD3-203ENST00000541171 IGSF1Q8N6C5 1336 aa32.92■■■□□ 2.86
LEMD3-203ENST00000541171 GNPATO15228 680 aa32.91■■■□□ 2.86
LEMD3-203ENST00000541171 SSFA2P28290 1259 aa32.91■■■□□ 2.86
LEMD3-203ENST00000541171 GOLGB1Q14789 3259 aaKnown RBP32.91■■■□□ 2.86
LEMD3-203ENST00000541171 C1QTNF8P60827 252 aa32.9■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms