RNA–Protein interactions for RNA: ENST00000541132.1

RAD9A-206, Transcript of RAD9 checkpoint clamp component A, humanhuman

TSL 3

Gene RAD9A, Length 586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9A-206ENST00000541132 RGPD2P0DJD1 1756 aa25.43■■□□□ 1.66
RAD9A-206ENST00000541132 COG3Q96JB2 828 aa25.42■■□□□ 1.66
RAD9A-206ENST00000541132 LY75O60449 1722 aa25.42■■□□□ 1.66
RAD9A-206ENST00000541132 ANKRD36BQ8N2N9 1353 aa25.42■■□□□ 1.66
RAD9A-206ENST00000541132 AMPHP49418 695 aa25.41■■□□□ 1.66
RAD9A-206ENST00000541132 HOXC9P31274 260 aa25.4■■□□□ 1.66
RAD9A-206ENST00000541132 MAP3K19Q56UN5 1328 aa25.39■■□□□ 1.66
RAD9A-206ENST00000541132 ZCRB1Q8TBF4 217 aaKnown RBP25.39■■□□□ 1.66
RAD9A-206ENST00000541132 SHANK3Q9BYB0 1731 aa25.38■■□□□ 1.65
RAD9A-206ENST00000541132 FBLN1P23142 703 aa25.38■■□□□ 1.65
RAD9A-206ENST00000541132 NSD2O96028 1365 aa25.36■■□□□ 1.65
RAD9A-206ENST00000541132 TONSLQ96HA7 1378 aa25.36■■□□□ 1.65
RAD9A-206ENST00000541132 CCNL1Q9UK58 526 aaPredicted RBP25.36■■□□□ 1.65
RAD9A-206ENST00000541132 MSH5O43196 834 aa25.35■■□□□ 1.65
RAD9A-206ENST00000541132 NLGN2Q8NFZ4 835 aa25.35■■□□□ 1.65
RAD9A-206ENST00000541132 MEGF6O75095 1541 aa25.34■■□□□ 1.65
RAD9A-206ENST00000541132 GIGYF1O75420 1035 aaPredicted RBP25.32■■□□□ 1.64
RAD9A-206ENST00000541132 USP47Q96K76 1375 aa25.31■■□□□ 1.64
RAD9A-206ENST00000541132 ST20-MTHFSA0A0A6YYL1 179 aa25.31■■□□□ 1.64
RAD9A-206ENST00000541132 TESK2Q96S53 571 aa25.31■■□□□ 1.64
RAD9A-206ENST00000541132 COL23A1Q86Y22 540 aaPredicted RBP25.3■■□□□ 1.64
RAD9A-206ENST00000541132 RRS1Q15050 365 aaKnown RBP25.29■■□□□ 1.64
RAD9A-206ENST00000541132 NBPF6Q5VWK0 638 aa25.29■■□□□ 1.64
RAD9A-206ENST00000541132 USHBP1Q8N6Y0 703 aa25.29■■□□□ 1.64
RAD9A-206ENST00000541132 NBPF4Q96M43 638 aa25.29■■□□□ 1.64
RAD9A-206ENST00000541132 RTL1A6NKG5 1358 aa25.29■■□□□ 1.64
RAD9A-206ENST00000541132 SLC24A1O60721 1099 aa25.28■■□□□ 1.64
RAD9A-206ENST00000541132 GRIN3BO60391 1043 aa25.27■■□□□ 1.64
RAD9A-206ENST00000541132 RAPGEF4Q8WZA2 1011 aa25.27■■□□□ 1.64
RAD9A-206ENST00000541132 CGNL1Q0VF96 1302 aa25.27■■□□□ 1.64
RAD9A-206ENST00000541132 GOLGB1Q14789 3259 aaKnown RBP25.25■■□□□ 1.63
RAD9A-206ENST00000541132 YBX3P16989 372 aaKnown RBP eCLIP25.25■■□□□ 1.63
RAD9A-206ENST00000541132 MSL1Q68DK7 614 aa25.25■■□□□ 1.63
RAD9A-206ENST00000541132 GGNBP2Q9H3C7 697 aa25.25■■□□□ 1.63
RAD9A-206ENST00000541132 SMG6Q86US8 1419 aaKnown RBP25.25■■□□□ 1.63
RAD9A-206ENST00000541132 C5P01031 1676 aa25.25■■□□□ 1.63
RAD9A-206ENST00000541132 TATP17735 454 aaPredicted RBP25.24■■□□□ 1.63
RAD9A-206ENST00000541132 FYB1O15117 783 aa25.23■■□□□ 1.63
RAD9A-206ENST00000541132 TAF1LQ8IZX4 1826 aa25.21■■□□□ 1.63
RAD9A-206ENST00000541132 PCDH11XQ9BZA7 1347 aa25.2■■□□□ 1.62
RAD9A-206ENST00000541132 PCDH11YQ9BZA8 1340 aa25.2■■□□□ 1.62
RAD9A-206ENST00000541132 HMGB2P26583 209 aaKnown RBP25.2■■□□□ 1.62
RAD9A-206ENST00000541132 HSP90AB2PQ58FF8 381 aa25.19■■□□□ 1.62
RAD9A-206ENST00000541132 MPRIPQ6WCQ1 1025 aa25.19■■□□□ 1.62
RAD9A-206ENST00000541132 FLAD1Q8NFF5 587 aa25.19■■□□□ 1.62
RAD9A-206ENST00000541132 KIF20BQ96Q89 1820 aa25.18■■□□□ 1.62
RAD9A-206ENST00000541132 PALLDQ8WX93 1383 aa25.18■■□□□ 1.62
RAD9A-206ENST00000541132 TMF1P82094 1093 aa25.17■■□□□ 1.62
RAD9A-206ENST00000541132 CD2APQ9Y5K6 639 aa25.17■■□□□ 1.62
RAD9A-206ENST00000541132 INSRP06213 1382 aa25.17■■□□□ 1.62
RAD9A-206ENST00000541132 ITGB4P16144 1822 aa25.16■■□□□ 1.62
RAD9A-206ENST00000541132 FLT4P35916 1363 aa25.15■■□□□ 1.62
RAD9A-206ENST00000541132 C4BP0C0L5 1744 aa25.14■■□□□ 1.61
RAD9A-206ENST00000541132 ATP10DQ9P241 1426 aa25.13■■□□□ 1.61
RAD9A-206ENST00000541132 TOGARAM1Q9Y4F4 1720 aa25.13■■□□□ 1.61
RAD9A-206ENST00000541132 CYP27B1O15528 508 aa25.13■■□□□ 1.61
RAD9A-206ENST00000541132 SMARCC1Q92922 1105 aaPredicted RBP25.13■■□□□ 1.61
RAD9A-206ENST00000541132 AK7Q96M32 723 aa25.13■■□□□ 1.61
RAD9A-206ENST00000541132 KIF24Q5T7B8 1368 aa25.11■■□□□ 1.61
RAD9A-206ENST00000541132 UBR3Q6ZT12 1888 aa25.09■■□□□ 1.61
RAD9A-206ENST00000541132 PKD1L3Q7Z443 1732 aa25.09■■□□□ 1.61
RAD9A-206ENST00000541132 PHF14O94880 888 aa25.08■■□□□ 1.61
RAD9A-206ENST00000541132 GPBP1L1Q9HC44 474 aaPredicted RBP25.08■■□□□ 1.61
RAD9A-206ENST00000541132 CDCA8Q53HL2 280 aa25.07■■□□□ 1.6
RAD9A-206ENST00000541132 PIGBQ92521 554 aa25.07■■□□□ 1.6
RAD9A-206ENST00000541132 EMILIN1Q9Y6C2 1016 aa25.07■■□□□ 1.6
RAD9A-206ENST00000541132 SMIM5Q71RC9 77 aa25.06■■□□□ 1.6
RAD9A-206ENST00000541132 AMIGO3Q86WK7 504 aa25.06■■□□□ 1.6
RAD9A-206ENST00000541132 NSD3Q9BZ95 1437 aa25.05■■□□□ 1.6
RAD9A-206ENST00000541132 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.05■■□□□ 1.6
RAD9A-206ENST00000541132 PPM1GO15355 546 aaPredicted RBP25.04■■□□□ 1.6
RAD9A-206ENST00000541132 ZNF526Q8TF50 670 aaPredicted RBP25.04■■□□□ 1.6
RAD9A-206ENST00000541132 WWC3Q9ULE0 1092 aa25.04■■□□□ 1.6
RAD9A-206ENST00000541132 SPG7Q9UQ90 795 aa25.04■■□□□ 1.6
RAD9A-206ENST00000541132 IGSF1Q8N6C5 1336 aa25.04■■□□□ 1.6
RAD9A-206ENST00000541132 NKX1-1Q15270 411 aaPredicted RBP25.03■■□□□ 1.6
RAD9A-206ENST00000541132 MAP2P11137 1827 aaKnown RBP25.02■■□□□ 1.6
RAD9A-206ENST00000541132 IFFO2Q5TF58 517 aa25.02■■□□□ 1.6
RAD9A-206ENST00000541132 CARD14Q9BXL6 1004 aa25.02■■□□□ 1.6
RAD9A-206ENST00000541132 LOC102724428A0A0B4J2F2 783 aa25.01■■□□□ 1.59
RAD9A-206ENST00000541132 SSFA2P28290 1259 aa25.01■■□□□ 1.59
RAD9A-206ENST00000541132 SIK1P57059 783 aa25.01■■□□□ 1.59
RAD9A-206ENST00000541132 LINC00116Q8NCU8 138 aa25.01■■□□□ 1.59
RAD9A-206ENST00000541132 ADCY9O60503 1353 aa25.01■■□□□ 1.59
RAD9A-206ENST00000541132 TMOD3Q9NYL9 352 aa25■■□□□ 1.59
RAD9A-206ENST00000541132 NCAPD2Q15021 1401 aa25■■□□□ 1.59
RAD9A-206ENST00000541132 CEP350Q5VT06 3117 aa24.98■■□□□ 1.59
RAD9A-206ENST00000541132 ANKRD26Q9UPS8 1709 aa24.98■■□□□ 1.59
RAD9A-206ENST00000541132 WASHC2AQ641Q2 1341 aa24.97■■□□□ 1.59
RAD9A-206ENST00000541132 GNPATO15228 680 aa24.97■■□□□ 1.59
RAD9A-206ENST00000541132 EYA1Q99502 592 aa24.97■■□□□ 1.59
RAD9A-206ENST00000541132 ATP6V1AP38606 617 aa24.96■■□□□ 1.59
RAD9A-206ENST00000541132 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.96■■□□□ 1.59
RAD9A-206ENST00000541132 ASAP1Q9ULH1 1129 aa24.96■■□□□ 1.59
RAD9A-206ENST00000541132 HSPA6P17066 643 aa24.95■■□□□ 1.58
RAD9A-206ENST00000541132 ITPK1Q13572 414 aa24.95■■□□□ 1.58
RAD9A-206ENST00000541132 IFNL2Q8IZJ0 200 aa24.95■■□□□ 1.58
RAD9A-206ENST00000541132 PHKG2P15735 406 aa24.93■■□□□ 1.58
RAD9A-206ENST00000541132 ATG3Q9NT62 314 aa24.91■■□□□ 1.58
RAD9A-206ENST00000541132 MMP10P09238 476 aa24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms