RNA–Protein interactions for RNA: ENST00000541081.1

TM7SF3-209, Transcript of transmembrane 7 superfamily member 3, humanhuman

TSL 4

Gene TM7SF3, Length 516 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM7SF3-209ENST00000541081 CGNL1Q0VF96 1302 aa12.78□□□□□ -0.36
TM7SF3-209ENST00000541081 RGPD3A6NKT7 1758 aaPredicted RBP12.78□□□□□ -0.36
TM7SF3-209ENST00000541081 RGPD4Q7Z3J3 1758 aa12.78□□□□□ -0.36
TM7SF3-209ENST00000541081 BCL9O00512 1426 aa12.78□□□□□ -0.36
TM7SF3-209ENST00000541081 NBPF14Q5TI25 921 aa12.77□□□□□ -0.37
TM7SF3-209ENST00000541081 ZBTB22O15209 634 aa12.76□□□□□ -0.37
TM7SF3-209ENST00000541081 FLT4P35916 1363 aa12.76□□□□□ -0.37
TM7SF3-209ENST00000541081 SRCAPQ6ZRS2 3230 aa12.76□□□□□ -0.37
TM7SF3-209ENST00000541081 NHSQ6T4R5 1651 aa12.76□□□□□ -0.37
TM7SF3-209ENST00000541081 ANKRD26Q9UPS8 1709 aa12.76□□□□□ -0.37
TM7SF3-209ENST00000541081 PLSCR1O15162 318 aa12.75□□□□□ -0.37
TM7SF3-209ENST00000541081 KIF24Q5T7B8 1368 aa12.75□□□□□ -0.37
TM7SF3-209ENST00000541081 POTEHQ6S545 545 aa12.75□□□□□ -0.37
TM7SF3-209ENST00000541081 PTF1AQ7RTS3 328 aa12.75□□□□□ -0.37
TM7SF3-209ENST00000541081 MAP2P11137 1827 aaKnown RBP12.74□□□□□ -0.37
TM7SF3-209ENST00000541081 LRP5O75197 1615 aa12.74□□□□□ -0.37
TM7SF3-209ENST00000541081 INSRP06213 1382 aa12.74□□□□□ -0.37
TM7SF3-209ENST00000541081 PPM1GO15355 546 aaPredicted RBP12.74□□□□□ -0.37
TM7SF3-209ENST00000541081 DDX54Q8TDD1 881 aaKnown RBP12.74□□□□□ -0.37
TM7SF3-209ENST00000541081 ACSBG1Q96GR2 724 aa12.74□□□□□ -0.37
TM7SF3-209ENST00000541081 KAT6BQ8WYB5 2073 aa12.74□□□□□ -0.37
TM7SF3-209ENST00000541081 HSP90AB2PQ58FF8 381 aa12.73□□□□□ -0.37
TM7SF3-209ENST00000541081 NBPF6Q5VWK0 638 aa12.73□□□□□ -0.37
TM7SF3-209ENST00000541081 USHBP1Q8N6Y0 703 aa12.73□□□□□ -0.37
TM7SF3-209ENST00000541081 NBPF4Q96M43 638 aa12.73□□□□□ -0.37
TM7SF3-209ENST00000541081 PANK3Q9H999 370 aa12.73□□□□□ -0.37
TM7SF3-209ENST00000541081 EMILIN1Q9Y6C2 1016 aa12.73□□□□□ -0.37
TM7SF3-209ENST00000541081 KCNQ2O43526 872 aa12.72□□□□□ -0.37
TM7SF3-209ENST00000541081 RAPGEF4Q8WZA2 1011 aa12.72□□□□□ -0.37
TM7SF3-209ENST00000541081 BTAF1O14981 1849 aa12.72□□□□□ -0.37
TM7SF3-209ENST00000541081 TNNT2P45379 298 aaPredicted RBP12.71□□□□□ -0.37
TM7SF3-209ENST00000541081 ZCRB1Q8TBF4 217 aaKnown RBP12.71□□□□□ -0.37
TM7SF3-209ENST00000541081 MEGF6O75095 1541 aa12.71□□□□□ -0.38
TM7SF3-209ENST00000541081 SHANK3Q9BYB0 1731 aa12.71□□□□□ -0.38
TM7SF3-209ENST00000541081 TATP17735 454 aaPredicted RBP12.7□□□□□ -0.38
TM7SF3-209ENST00000541081 DOT1LQ8TEK3 1739 aa12.7□□□□□ -0.38
TM7SF3-209ENST00000541081 TXNRD1Q16881 649 aa12.69□□□□□ -0.38
TM7SF3-209ENST00000541081 SYTL4Q96C24 671 aaPredicted RBP12.69□□□□□ -0.38
TM7SF3-209ENST00000541081 NSD2O96028 1365 aa12.69□□□□□ -0.38
TM7SF3-209ENST00000541081 WASHC2AQ641Q2 1341 aa12.68□□□□□ -0.38
TM7SF3-209ENST00000541081 KNSTRNQ9Y448 316 aa12.68□□□□□ -0.38
TM7SF3-209ENST00000541081 PROM2Q8N271 834 aa12.67□□□□□ -0.38
TM7SF3-209ENST00000541081 POLKQ9UBT6 870 aa12.67□□□□□ -0.38
TM7SF3-209ENST00000541081 KIF7Q2M1P5 1343 aa12.66□□□□□ -0.38
TM7SF3-209ENST00000541081 MORC1Q86VD1 984 aa12.66□□□□□ -0.38
TM7SF3-209ENST00000541081 ANO8Q9HCE9 1232 aaPredicted RBP12.66□□□□□ -0.38
TM7SF3-209ENST00000541081 STK32BQ9NY57 414 aa12.66□□□□□ -0.38
TM7SF3-209ENST00000541081 PCDH11XQ9BZA7 1347 aa12.65□□□□□ -0.38
TM7SF3-209ENST00000541081 PCDH11YQ9BZA8 1340 aa12.65□□□□□ -0.38
TM7SF3-209ENST00000541081 PRIM1P49642 420 aaKnown RBP12.65□□□□□ -0.38
TM7SF3-209ENST00000541081 RBM42Q9BTD8 480 aaKnown RBP12.65□□□□□ -0.38
TM7SF3-209ENST00000541081 PKD1L3Q7Z443 1732 aa12.64□□□□□ -0.39
TM7SF3-209ENST00000541081 EIF4A2Q14240 407 aaKnown RBP12.63□□□□□ -0.39
TM7SF3-209ENST00000541081 SLC15A2Q16348 729 aa12.63□□□□□ -0.39
TM7SF3-209ENST00000541081 EYA1Q99502 592 aa12.63□□□□□ -0.39
TM7SF3-209ENST00000541081 SPON1Q9HCB6 807 aa12.63□□□□□ -0.39
TM7SF3-209ENST00000541081 PPP1R1BQ9UD71 204 aaPredicted RBP12.63□□□□□ -0.39
TM7SF3-209ENST00000541081 SPG7Q9UQ90 795 aa12.63□□□□□ -0.39
TM7SF3-209ENST00000541081 CASZ1Q86V15 1759 aa12.63□□□□□ -0.39
TM7SF3-209ENST00000541081 NCAPD2Q15021 1401 aa12.62□□□□□ -0.39
TM7SF3-209ENST00000541081 LY75O60449 1722 aa12.62□□□□□ -0.39
TM7SF3-209ENST00000541081 PAPPAQ13219 1627 aa12.62□□□□□ -0.39
TM7SF3-209ENST00000541081 SLC27A3Q5K4L6 730 aa12.61□□□□□ -0.39
TM7SF3-209ENST00000541081 CYP27B1O15528 508 aa12.6□□□□□ -0.39
TM7SF3-209ENST00000541081 LRRC4BQ9NT99 713 aa12.6□□□□□ -0.39
TM7SF3-209ENST00000541081 ITGB4P16144 1822 aa12.6□□□□□ -0.39
TM7SF3-209ENST00000541081 TOGARAM1Q9Y4F4 1720 aa12.59□□□□□ -0.39
TM7SF3-209ENST00000541081 ZBTB7AO95365 584 aa12.59□□□□□ -0.39
TM7SF3-209ENST00000541081 AMER1Q5JTC6 1135 aaPredicted RBP12.59□□□□□ -0.39
TM7SF3-209ENST00000541081 MPRIPQ6WCQ1 1025 aa12.59□□□□□ -0.39
TM7SF3-209ENST00000541081 PDGFDQ9GZP0 370 aaPredicted RBP12.59□□□□□ -0.39
TM7SF3-209ENST00000541081 KCNQ4P56696 695 aa12.58□□□□□ -0.4
TM7SF3-209ENST00000541081 CC2D1BQ5T0F9 858 aaKnown RBP12.58□□□□□ -0.4
TM7SF3-209ENST00000541081 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.58□□□□□ -0.4
TM7SF3-209ENST00000541081 CCNL1Q9UK58 526 aaPredicted RBP12.58□□□□□ -0.4
TM7SF3-209ENST00000541081 IGSF1Q8N6C5 1336 aa12.58□□□□□ -0.4
TM7SF3-209ENST00000541081 CNGB1Q14028 1251 aaPredicted RBP12.57□□□□□ -0.4
TM7SF3-209ENST00000541081 ZNF827Q17R98 1081 aa12.57□□□□□ -0.4
TM7SF3-209ENST00000541081 IFNL2Q8IZJ0 200 aa12.57□□□□□ -0.4
TM7SF3-209ENST00000541081 QSER1Q2KHR3 1735 aa12.57□□□□□ -0.4
TM7SF3-209ENST00000541081 PER1O15534 1290 aaPredicted RBP12.56□□□□□ -0.4
TM7SF3-209ENST00000541081 MTFR1LQ9H019 292 aa12.56□□□□□ -0.4
TM7SF3-209ENST00000541081 TFCP2L1Q9NZI6 479 aa12.56□□□□□ -0.4
TM7SF3-209ENST00000541081 PALLDQ8WX93 1383 aa12.56□□□□□ -0.4
TM7SF3-209ENST00000541081 PLEKHG2Q9H7P9 1386 aa12.56□□□□□ -0.4
TM7SF3-209ENST00000541081 TUBGCP6Q96RT7 1819 aa12.55□□□□□ -0.4
TM7SF3-209ENST00000541081 C5P01031 1676 aa12.55□□□□□ -0.4
TM7SF3-209ENST00000541081 PHKG2P15735 406 aa12.55□□□□□ -0.4
TM7SF3-209ENST00000541081 NKX1-1Q15270 411 aaPredicted RBP12.55□□□□□ -0.4
TM7SF3-209ENST00000541081 AKT1S1Q96B36 256 aa12.55□□□□□ -0.4
TM7SF3-209ENST00000541081 HMGB2P26583 209 aaKnown RBP12.54□□□□□ -0.4
TM7SF3-209ENST00000541081 MTHFSP49914 203 aa12.54□□□□□ -0.4
TM7SF3-209ENST00000541081 PLEKHO1Q53GL0 409 aaPredicted RBP12.54□□□□□ -0.4
TM7SF3-209ENST00000541081 SULT6B1Q6IMI4 303 aa12.54□□□□□ -0.4
TM7SF3-209ENST00000541081 SMARCC1Q92922 1105 aaPredicted RBP12.54□□□□□ -0.4
TM7SF3-209ENST00000541081 TMOD3Q9NYL9 352 aa12.54□□□□□ -0.4
TM7SF3-209ENST00000541081 TAF1LQ8IZX4 1826 aa12.53□□□□□ -0.4
TM7SF3-209ENST00000541081 HSP90AB1P08238 724 aaKnown RBP12.53□□□□□ -0.4
TM7SF3-209ENST00000541081 AMOTQ4VCS5 1084 aa12.53□□□□□ -0.4
TM7SF3-209ENST00000541081 AEBP1Q8IUX7 1158 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms