RNA–Protein interactions for RNA: ENST00000540990.5

CACNB3-203, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2 BASIC

Gene CACNB3, Length 1,814 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-203ENST00000540990 FAM43AQ8N2R8 423 aa20.92■□□□□ 0.94
CACNB3-203ENST00000540990 SPRYD3Q8NCJ5 442 aa20.92■□□□□ 0.94
CACNB3-203ENST00000540990 KDRP35968 1356 aa20.92■□□□□ 0.94
CACNB3-203ENST00000540990 ARHGAP23Q9P227 1491 aa20.91■□□□□ 0.94
CACNB3-203ENST00000540990 SLIT1O75093 1534 aa20.91■□□□□ 0.94
CACNB3-203ENST00000540990 GSPT1P15170 499 aaKnown RBP20.91■□□□□ 0.94
CACNB3-203ENST00000540990 TRAK2O60296 914 aa20.9■□□□□ 0.94
CACNB3-203ENST00000540990 RTN4Q9NQC3 1192 aaKnown RBP20.9■□□□□ 0.94
CACNB3-203ENST00000540990 RTL1A6NKG5 1358 aa20.9■□□□□ 0.94
CACNB3-203ENST00000540990 LTKP29376 864 aa20.9■□□□□ 0.94
CACNB3-203ENST00000540990 RAB3GAP1Q15042 981 aa20.9■□□□□ 0.94
CACNB3-203ENST00000540990 TTC22Q5TAA0 569 aa20.9■□□□□ 0.94
CACNB3-203ENST00000540990 CEP85Q6P2H3 762 aa20.9■□□□□ 0.94
CACNB3-203ENST00000540990 FMN2Q9NZ56 1722 aa20.89■□□□□ 0.94
CACNB3-203ENST00000540990 HSP90AB2PQ58FF8 381 aa20.89■□□□□ 0.93
CACNB3-203ENST00000540990 ISY1Q9ULR0 285 aaKnown RBP20.89■□□□□ 0.93
CACNB3-203ENST00000540990 SBNO1A3KN83 1393 aa20.89■□□□□ 0.93
CACNB3-203ENST00000540990 RIMS1Q86UR5 1692 aaKnown RBP20.88■□□□□ 0.93
CACNB3-203ENST00000540990 K7ELQ4 463 aaPredicted RBP20.88■□□□□ 0.93
CACNB3-203ENST00000540990 HSP90AB1P08238 724 aaKnown RBP20.87■□□□□ 0.93
CACNB3-203ENST00000540990 FLT4P35916 1363 aa20.87■□□□□ 0.93
CACNB3-203ENST00000540990 GOLGA6L3A6NEY3 463 aa20.86■□□□□ 0.93
CACNB3-203ENST00000540990 PTMSP20962 102 aa20.86■□□□□ 0.93
CACNB3-203ENST00000540990 KRT24Q2M2I5 525 aa20.86■□□□□ 0.93
CACNB3-203ENST00000540990 CLEC17AQ6ZS10 378 aa20.86■□□□□ 0.93
CACNB3-203ENST00000540990 MCM10Q7L590 875 aa20.86■□□□□ 0.93
CACNB3-203ENST00000540990 MSH6P52701 1360 aa20.86■□□□□ 0.93
CACNB3-203ENST00000540990 DIP2AQ14689 1571 aa20.86■□□□□ 0.93
CACNB3-203ENST00000540990 LRRC37A3O60309 1634 aa20.86■□□□□ 0.93
CACNB3-203ENST00000540990 TBX22Q9Y458 520 aa20.85■□□□□ 0.93
CACNB3-203ENST00000540990 TNPO1Q92973 898 aaKnown RBP20.85■□□□□ 0.93
CACNB3-203ENST00000540990 MAP3K19Q56UN5 1328 aa20.85■□□□□ 0.93
CACNB3-203ENST00000540990 IGSF1Q8N6C5 1336 aa20.85■□□□□ 0.93
CACNB3-203ENST00000540990 USP54Q70EL1 1684 aa20.85■□□□□ 0.93
CACNB3-203ENST00000540990 HTATSF1O43719 755 aaKnown RBP20.84■□□□□ 0.93
CACNB3-203ENST00000540990 CD2BP2O95400 341 aaKnown RBP20.84■□□□□ 0.93
CACNB3-203ENST00000540990 GBP4Q96PP9 640 aa20.83■□□□□ 0.93
CACNB3-203ENST00000540990 XRCC6P12956 609 aaKnown RBP eCLIP20.83■□□□□ 0.92
CACNB3-203ENST00000540990 RABEP1Q15276 862 aa20.83■□□□□ 0.92
CACNB3-203ENST00000540990 MTHFSDQ2M296 383 aaKnown RBP20.81■□□□□ 0.92
CACNB3-203ENST00000540990 USP26Q9BXU7 913 aa20.81■□□□□ 0.92
CACNB3-203ENST00000540990 OSBPL3Q9H4L5 887 aa20.81■□□□□ 0.92
CACNB3-203ENST00000540990 ANKARQ7Z5J8 1434 aa20.81■□□□□ 0.92
CACNB3-203ENST00000540990 SOS1Q07889 1333 aaPredicted RBP20.81■□□□□ 0.92
CACNB3-203ENST00000540990 CCT4P50991 539 aaKnown RBP20.81■□□□□ 0.92
CACNB3-203ENST00000540990 SKOR2Q2VWA4 1001 aaPredicted RBP20.81■□□□□ 0.92
CACNB3-203ENST00000540990 GAS2L2Q8NHY3 880 aa20.81■□□□□ 0.92
CACNB3-203ENST00000540990 MEIS3Q99687 375 aa20.81■□□□□ 0.92
CACNB3-203ENST00000540990 PIK3C2AO00443 1686 aa20.8■□□□□ 0.92
CACNB3-203ENST00000540990 MRE11P49959 708 aa20.8■□□□□ 0.92
CACNB3-203ENST00000540990 EID1Q9Y6B2 187 aa20.8■□□□□ 0.92
CACNB3-203ENST00000540990 XRN1Q8IZH2 1706 aaKnown RBP20.79■□□□□ 0.92
CACNB3-203ENST00000540990 SLC4A2P04920 1241 aa20.79■□□□□ 0.92
CACNB3-203ENST00000540990 AMOTL2Q9Y2J4 779 aa20.79■□□□□ 0.92
CACNB3-203ENST00000540990 CEP170BQ9Y4F5 1589 aaPredicted RBP20.79■□□□□ 0.92
CACNB3-203ENST00000540990 HMMRO75330 724 aa20.78■□□□□ 0.92
CACNB3-203ENST00000540990 C16orf71Q8IYS4 520 aaPredicted RBP20.78■□□□□ 0.92
CACNB3-203ENST00000540990 RBM42Q9BTD8 480 aaKnown RBP20.78■□□□□ 0.92
CACNB3-203ENST00000540990 SDSP20132 328 aa20.77■□□□□ 0.92
CACNB3-203ENST00000540990 RTF1Q92541 710 aaKnown RBP20.77■□□□□ 0.92
CACNB3-203ENST00000540990 BABAM1Q9NWV8 329 aa20.77■□□□□ 0.92
CACNB3-203ENST00000540990 TSPYL4Q9UJ04 414 aa20.77■□□□□ 0.92
CACNB3-203ENST00000540990 NWD1Q149M9 1564 aa20.77■□□□□ 0.92
CACNB3-203ENST00000540990 OTUD7AQ8TE49 926 aaPredicted RBP20.76■□□□□ 0.91
CACNB3-203ENST00000540990 EYA1Q99502 592 aa20.76■□□□□ 0.91
CACNB3-203ENST00000540990 N4BP2Q86UW6 1770 aaPredicted RBP20.76■□□□□ 0.91
CACNB3-203ENST00000540990 MARF1Q9Y4F3 1742 aaKnown RBP20.75■□□□□ 0.91
CACNB3-203ENST00000540990 FAM208AQ9UK61 1670 aaKnown RBP20.75■□□□□ 0.91
CACNB3-203ENST00000540990 FOXO3O43524 673 aa20.75■□□□□ 0.91
CACNB3-203ENST00000540990 CASC1Q6TDU7 716 aa20.75■□□□□ 0.91
CACNB3-203ENST00000540990 SLC26A8Q96RN1 970 aa20.75■□□□□ 0.91
CACNB3-203ENST00000540990 SALL3Q9BXA9 1300 aa20.74■□□□□ 0.91
CACNB3-203ENST00000540990 NUTM2FA1L443 756 aa20.74■□□□□ 0.91
CACNB3-203ENST00000540990 G2E3Q7L622 706 aa20.74■□□□□ 0.91
CACNB3-203ENST00000540990 GZF1Q9H116 711 aaPredicted RBP20.74■□□□□ 0.91
CACNB3-203ENST00000540990 PXDNLA1KZ92 1463 aa20.73■□□□□ 0.91
CACNB3-203ENST00000540990 HSP90AA1P07900 732 aaKnown RBP20.72■□□□□ 0.91
CACNB3-203ENST00000540990 SMARCA5O60264 1052 aaPredicted RBP20.71■□□□□ 0.91
CACNB3-203ENST00000540990 REC8O95072 547 aa20.71■□□□□ 0.91
CACNB3-203ENST00000540990 CYP2E1P05181 493 aaPredicted RBP20.71■□□□□ 0.91
CACNB3-203ENST00000540990 GRPEL1Q9HAV7 217 aa20.71■□□□□ 0.91
CACNB3-203ENST00000540990 IBTKQ9P2D0 1353 aaPredicted RBP20.71■□□□□ 0.91
CACNB3-203ENST00000540990 RGPD8O14715 1765 aaPredicted RBP20.71■□□□□ 0.91
CACNB3-203ENST00000540990 GNAI2P04899 355 aa20.71■□□□□ 0.91
CACNB3-203ENST00000540990 AMPHP49418 695 aa20.71■□□□□ 0.91
CACNB3-203ENST00000540990 NGDNQ8NEJ9 315 aaKnown RBP20.71■□□□□ 0.91
CACNB3-203ENST00000540990 MIS18AQ9NYP9 233 aa20.71■□□□□ 0.91
CACNB3-203ENST00000540990 TUBGCP6Q96RT7 1819 aa20.7■□□□□ 0.91
CACNB3-203ENST00000540990 CACNA1FO60840 1977 aa20.7■□□□□ 0.9
CACNB3-203ENST00000540990 PDE1AP54750 535 aa20.7■□□□□ 0.9
CACNB3-203ENST00000540990 SSFA2P28290 1259 aa20.69■□□□□ 0.9
CACNB3-203ENST00000540990 NUCB2P80303 420 aa20.69■□□□□ 0.9
CACNB3-203ENST00000540990 CCDC30Q5VVM6 783 aa20.69■□□□□ 0.9
CACNB3-203ENST00000540990 STK31Q9BXU1 1019 aa20.69■□□□□ 0.9
CACNB3-203ENST00000540990 CWC22Q9HCG8 908 aaKnown RBP20.69■□□□□ 0.9
CACNB3-203ENST00000540990 ERC2O15083 957 aa20.69■□□□□ 0.9
CACNB3-203ENST00000540990 GNAI3P08754 354 aa20.69■□□□□ 0.9
CACNB3-203ENST00000540990 TRHP20396 242 aaPredicted RBP20.69■□□□□ 0.9
CACNB3-203ENST00000540990 GNAT3A8MTJ3 354 aa20.68■□□□□ 0.9
CACNB3-203ENST00000540990 HOXC9P31274 260 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms