RNA–Protein interactions for RNA: ENST00000540957.1

FERMT3-204, Transcript of fermitin family member 3, humanhuman

TSL 5

Gene FERMT3, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FERMT3-204ENST00000540957 PRKRIP1Q9H875 184 aaPredicted RBP28.59■■■□□ 2.17
FERMT3-204ENST00000540957 RGPD1P0DJD0 1748 aa28.59■■■□□ 2.17
FERMT3-204ENST00000540957 DDX54Q8TDD1 881 aaKnown RBP28.58■■■□□ 2.17
FERMT3-204ENST00000540957 AEBP1Q8IUX7 1158 aa28.57■■■□□ 2.16
FERMT3-204ENST00000540957 NUDCQ9Y266 331 aa28.57■■■□□ 2.16
FERMT3-204ENST00000540957 EP400Q96L91 3159 aa28.57■■■□□ 2.16
FERMT3-204ENST00000540957 KDRP35968 1356 aa28.55■■■□□ 2.16
FERMT3-204ENST00000540957 PCDH11XQ9BZA7 1347 aa28.55■■■□□ 2.16
FERMT3-204ENST00000540957 PCDH11YQ9BZA8 1340 aa28.55■■■□□ 2.16
FERMT3-204ENST00000540957 SPG7Q9UQ90 795 aa28.55■■■□□ 2.16
FERMT3-204ENST00000540957 PLEKHG2Q9H7P9 1386 aa28.54■■■□□ 2.16
FERMT3-204ENST00000540957 HMOX1P09601 288 aa28.54■■■□□ 2.16
FERMT3-204ENST00000540957 SF3B2Q13435 895 aaKnown RBP28.54■■■□□ 2.16
FERMT3-204ENST00000540957 CCDC125Q86Z20 511 aa28.54■■■□□ 2.16
FERMT3-204ENST00000540957 BCL9O00512 1426 aa28.52■■■□□ 2.16
FERMT3-204ENST00000540957 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.52■■■□□ 2.16
FERMT3-204ENST00000540957 ANP32CO43423 234 aa28.51■■■□□ 2.15
FERMT3-204ENST00000540957 PKD1L3Q7Z443 1732 aa28.5■■■□□ 2.15
FERMT3-204ENST00000540957 TRIM37O94972 964 aa28.5■■■□□ 2.15
FERMT3-204ENST00000540957 PLEKHO1Q53GL0 409 aaPredicted RBP28.49■■■□□ 2.15
FERMT3-204ENST00000540957 SHANK3Q9BYB0 1731 aa28.49■■■□□ 2.15
FERMT3-204ENST00000540957 U2AF1L5P0DN76 240 aaPredicted RBP28.48■■■□□ 2.15
FERMT3-204ENST00000540957 U2AF1Q01081 240 aaKnown RBP eCLIP28.48■■■□□ 2.15
FERMT3-204ENST00000540957 AMOTQ4VCS5 1084 aa28.48■■■□□ 2.15
FERMT3-204ENST00000540957 CYP27B1O15528 508 aa28.45■■■□□ 2.14
FERMT3-204ENST00000540957 ACSBG1Q96GR2 724 aa28.44■■■□□ 2.14
FERMT3-204ENST00000540957 IFNL2Q8IZJ0 200 aa28.43■■■□□ 2.14
FERMT3-204ENST00000540957 ZNF530Q6P9A1 599 aaPredicted RBP28.42■■■□□ 2.14
FERMT3-204ENST00000540957 BCL11BQ9C0K0 894 aaPredicted RBP28.42■■■□□ 2.14
FERMT3-204ENST00000540957 PHKG2P15735 406 aa28.41■■■□□ 2.14
FERMT3-204ENST00000540957 BAG6P46379 1132 aa28.41■■■□□ 2.14
FERMT3-204ENST00000540957 APBA3O96018 575 aa28.4■■■□□ 2.14
FERMT3-204ENST00000540957 C1orf141Q5JVX7 400 aa28.4■■■□□ 2.14
FERMT3-204ENST00000540957 RSPH6AQ9H0K4 717 aa28.4■■■□□ 2.14
FERMT3-204ENST00000540957 TNS1Q9HBL0 1735 aaKnown RBP28.4■■■□□ 2.14
FERMT3-204ENST00000540957 PRKAR2BP31323 418 aa28.39■■■□□ 2.14
FERMT3-204ENST00000540957 SYTL4Q96C24 671 aaPredicted RBP28.39■■■□□ 2.14
FERMT3-204ENST00000540957 FCHSD2O94868 740 aa28.38■■■□□ 2.13
FERMT3-204ENST00000540957 NHSQ6T4R5 1651 aa28.38■■■□□ 2.13
FERMT3-204ENST00000540957 KCNQ2O43526 872 aa28.37■■■□□ 2.13
FERMT3-204ENST00000540957 HSP90AB1P08238 724 aaKnown RBP28.37■■■□□ 2.13
FERMT3-204ENST00000540957 NKX1-1Q15270 411 aaPredicted RBP28.37■■■□□ 2.13
FERMT3-204ENST00000540957 DEFB132Q7Z7B7 95 aa28.37■■■□□ 2.13
FERMT3-204ENST00000540957 SBF2Q86WG5 1849 aa28.36■■■□□ 2.13
FERMT3-204ENST00000540957 DOT1LQ8TEK3 1739 aa28.36■■■□□ 2.13
FERMT3-204ENST00000540957 PTF1AQ7RTS3 328 aa28.36■■■□□ 2.13
FERMT3-204ENST00000540957 PRIM1P49642 420 aaKnown RBP28.35■■■□□ 2.13
FERMT3-204ENST00000540957 WDR43Q15061 677 aaKnown RBP eCLIP28.35■■■□□ 2.13
FERMT3-204ENST00000540957 NEFMP07197 916 aa28.34■■■□□ 2.13
FERMT3-204ENST00000540957 MTHFSDQ2M296 383 aaKnown RBP28.34■■■□□ 2.13
FERMT3-204ENST00000540957 GAS2L2Q8NHY3 880 aa28.33■■■□□ 2.13
FERMT3-204ENST00000540957 PNNQ9H307 717 aaKnown RBP28.33■■■□□ 2.13
FERMT3-204ENST00000540957 EN1Q05925 392 aaPredicted RBP28.32■■■□□ 2.12
FERMT3-204ENST00000540957 AKAP4Q5JQC9 854 aa28.32■■■□□ 2.12
FERMT3-204ENST00000540957 DCAF5Q96JK2 942 aa28.32■■■□□ 2.12
FERMT3-204ENST00000540957 PHACTR3Q96KR7 559 aa28.3■■■□□ 2.12
FERMT3-204ENST00000540957 MAPK8IP3Q9UPT6 1336 aa28.28■■■□□ 2.12
FERMT3-204ENST00000540957 MPRIPQ6WCQ1 1025 aa28.28■■■□□ 2.12
FERMT3-204ENST00000540957 TOGARAM1Q9Y4F4 1720 aa28.28■■■□□ 2.12
FERMT3-204ENST00000540957 KDM6AO15550 1401 aaPredicted RBP28.27■■■□□ 2.12
FERMT3-204ENST00000540957 PLSCR1O15162 318 aa28.26■■■□□ 2.11
FERMT3-204ENST00000540957 EZH2Q15910 746 aaKnown RBP28.26■■■□□ 2.11
FERMT3-204ENST00000540957 MRS2Q9HD23 443 aa28.26■■■□□ 2.11
FERMT3-204ENST00000540957 TMOD3Q9NYL9 352 aa28.26■■■□□ 2.11
FERMT3-204ENST00000540957 MAP3K5Q99683 1374 aa28.25■■■□□ 2.11
FERMT3-204ENST00000540957 CAMKK2Q96RR4 588 aa28.25■■■□□ 2.11
FERMT3-204ENST00000540957 BTAF1O14981 1849 aa28.25■■■□□ 2.11
FERMT3-204ENST00000540957 ERVV-2B6SEH9 535 aa28.24■■■□□ 2.11
FERMT3-204ENST00000540957 GNAT3A8MTJ3 354 aa28.23■■■□□ 2.11
FERMT3-204ENST00000540957 CCDC184Q52MB2 194 aa28.23■■■□□ 2.11
FERMT3-204ENST00000540957 PLEKHF1Q96S99 279 aa28.23■■■□□ 2.11
FERMT3-204ENST00000540957 CABP4P57796 275 aa28.22■■■□□ 2.11
FERMT3-204ENST00000540957 PIGBQ92521 554 aa28.21■■■□□ 2.11
FERMT3-204ENST00000540957 ADAMTS8Q9UP79 889 aa28.21■■■□□ 2.11
FERMT3-204ENST00000540957 RGPD3A6NKT7 1758 aaPredicted RBP28.21■■■□□ 2.11
FERMT3-204ENST00000540957 RGPD4Q7Z3J3 1758 aa28.21■■■□□ 2.11
FERMT3-204ENST00000540957 KAT6BQ8WYB5 2073 aa28.2■■■□□ 2.11
FERMT3-204ENST00000540957 DIEXFQ68CQ4 756 aaKnown RBP28.2■■■□□ 2.1
FERMT3-204ENST00000540957 RNMTO43148 476 aaKnown RBP28.19■■■□□ 2.1
FERMT3-204ENST00000540957 CCDC146Q8IYE0 955 aa28.18■■■□□ 2.1
FERMT3-204ENST00000540957 RTF1Q92541 710 aaKnown RBP28.18■■■□□ 2.1
FERMT3-204ENST00000540957 LGR6Q9HBX8 967 aa28.18■■■□□ 2.1
FERMT3-204ENST00000540957 TXNRD1Q16881 649 aa28.17■■■□□ 2.1
FERMT3-204ENST00000540957 ITGB4P16144 1822 aa28.17■■■□□ 2.1
FERMT3-204ENST00000540957 NFE2L2Q16236 605 aa28.16■■■□□ 2.1
FERMT3-204ENST00000540957 SMARCC1Q92922 1105 aaPredicted RBP28.16■■■□□ 2.1
FERMT3-204ENST00000540957 RUNDC1Q96C34 613 aa28.16■■■□□ 2.1
FERMT3-204ENST00000540957 PALLDQ8WX93 1383 aa28.15■■■□□ 2.1
FERMT3-204ENST00000540957 NFATC2IPQ8NCF5 419 aa28.15■■■□□ 2.1
FERMT3-204ENST00000540957 SLC52A2Q9HAB3 445 aa28.15■■■□□ 2.1
FERMT3-204ENST00000540957 SCN11AQ9UI33 1791 aa28.14■■■□□ 2.1
FERMT3-204ENST00000540957 RREB1Q92766 1687 aa28.14■■■□□ 2.1
FERMT3-204ENST00000540957 MRC1P22897 1456 aa28.14■■■□□ 2.09
FERMT3-204ENST00000540957 PNISRQ8TF01 805 aaKnown RBP28.13■■■□□ 2.09
FERMT3-204ENST00000540957 ADAMTS7Q9UKP4 1686 aa28.13■■■□□ 2.09
FERMT3-204ENST00000540957 HTATSF1O43719 755 aaKnown RBP28.12■■■□□ 2.09
FERMT3-204ENST00000540957 TEFQ10587 303 aa28.12■■■□□ 2.09
FERMT3-204ENST00000540957 PROM2Q8N271 834 aa28.12■■■□□ 2.09
FERMT3-204ENST00000540957 IL17REQ8NFR9 667 aa28.12■■■□□ 2.09
FERMT3-204ENST00000540957 SLC27A3Q5K4L6 730 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms